Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:01:43 (3357049): wrapper (7.7.26015): starting
14:01:43 (3357049): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 14:01:43] Arguments: --nthreads 4
[2026-04-27 14:01:43] Threads: 4
[2026-04-27 14:01:43] Checking for CVMFS
[2026-04-27 14:01:43] No cvmfs_config command found, will try listing directly
[2026-04-27 14:01:43] CVMFS is ok
[2026-04-27 14:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 14:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 14:01:43] Further information can be found at the LHC@home message board.
[2026-04-27 14:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 14:01:43] Checking for apptainer binary...
[2026-04-27 14:01:43] which: no apptainer in ((null))
[2026-04-27 14:01:43] apptainer is not installed, using version from CVMFS
[2026-04-27 14:01:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 14:01:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-27 14:01:43] apptainer works
[2026-04-27 14:01:43] Set ATHENA_PROC_NUMBER=4
[2026-04-27 14:01:43] Set ATHENA_CORE_NUMBER=4
[2026-04-27 14:01:43] Starting ATLAS job with PandaID=7114722631
[2026-04-27 14:01:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 18:05:30]  *** The last 200 lines of the pilot log: ***
[2026-04-27 18:05:30] 2026-04-27 15:59:39,642 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7114722631/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,642 | INFO     | extracted standard info from prmon json
[2026-04-27 18:05:30] 2026-04-27 15:59:39,642 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 18:05:30] 2026-04-27 15:59:39,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 18:05:30] 2026-04-27 15:59:39,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 18:05:30] 2026-04-27 15:59:39,648 | INFO     | fitting pss+swap vs Time
[2026-04-27 18:05:30] 2026-04-27 15:59:39,648 | INFO     | sum of square deviations: 3972995422.5
[2026-04-27 18:05:30] 2026-04-27 15:59:39,650 | INFO     | sum of deviations: 3400709221.5
[2026-04-27 18:05:30] 2026-04-27 15:59:39,650 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,650 | INFO     | mean y: 2335145.97008547
[2026-04-27 18:05:30] 2026-04-27 15:59:39,650 | INFO     | intersect: 2335145.97008547
[2026-04-27 18:05:30] 2026-04-27 15:59:39,650 | INFO     | chi2: 1.9956196623146396
[2026-04-27 18:05:30] 2026-04-27 15:59:39,651 | INFO     | sum of square deviations: 3723716330.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,652 | INFO     | sum of deviations: 16491566245.000002
[2026-04-27 18:05:30] 2026-04-27 15:59:39,652 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,652 | INFO     | mean y: 2343010.7423580787
[2026-04-27 18:05:30] 2026-04-27 15:59:39,652 | INFO     | intersect: 2343010.7423580787
[2026-04-27 18:05:30] 2026-04-27 15:59:39,653 | INFO     | chi2: 1.3303684863596283
[2026-04-27 18:05:30] 2026-04-27 15:59:39,653 | INFO     | current chi2=1.3303684863596283 (change=33.33556932303488 %)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,653 | INFO     | sum of square deviations: 3485088600.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,654 | INFO     | sum of deviations: 15805091033.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,654 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,655 | INFO     | mean y: 2342572.026785714
[2026-04-27 18:05:30] 2026-04-27 15:59:39,655 | INFO     | intersect: 2342572.026785714
[2026-04-27 18:05:30] 2026-04-27 15:59:39,655 | INFO     | chi2: 1.3308001005311199
[2026-04-27 18:05:30] 2026-04-27 15:59:39,655 | INFO     | current chi2=1.3308001005311199 (change=-0.03244320471485051 %)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,655 | INFO     | right removable region: 223
[2026-04-27 18:05:30] 2026-04-27 15:59:39,656 | INFO     | sum of square deviations: 3723716330.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,657 | INFO     | sum of deviations: -20735219857.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,657 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,657 | INFO     | mean y: 2349691.423580786
[2026-04-27 18:05:30] 2026-04-27 15:59:39,657 | INFO     | intersect: 2349691.423580786
[2026-04-27 18:05:30] 2026-04-27 15:59:39,658 | INFO     | chi2: 0.7961550284333959
[2026-04-27 18:05:30] 2026-04-27 15:59:39,658 | INFO     | current chi2=0.7961550284333959 (change=60.10487151093874 %)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,658 | INFO     | sum of square deviations: 3485088600.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,659 | INFO     | sum of deviations: -12039057539.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | mean y: 2344116.035714286
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | intersect: 2344116.035714286
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | chi2: 0.7444267537313345
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | current chi2=0.7444267537313345 (change=6.497261570255707 %)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,660 | INFO     | left removable region: 10
[2026-04-27 18:05:30] 2026-04-27 15:59:39,661 | INFO     | sum of square deviations: 2996454322.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,662 | INFO     | sum of deviations: 398056231.99999857
[2026-04-27 18:05:30] 2026-04-27 15:59:39,662 | INFO     | mean x (centered): 0.0
[2026-04-27 18:05:30] 2026-04-27 15:59:39,662 | INFO     | mean y: 2352255.9342723005
[2026-04-27 18:05:30] 2026-04-27 15:59:39,662 | INFO     | intersect: 2352255.9342723005
[2026-04-27 18:05:30] 2026-04-27 15:59:39,663 | INFO     | chi2: 0.06337730774230732
[2026-04-27 18:05:30] 2026-04-27 15:59:39,663 | INFO     | current memory leak: 0.13 B/s (using 213 data points, chi2=0.06)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,663 | INFO     | could have reported an average CPU frequency of 2628 MHz (11 samples)
[2026-04-27 18:05:30] 2026-04-27 15:59:39,663 | INFO     | ..............................
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . Timing measurements:
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . get job = 0 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . initial setup = 6 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . payload setup = 10 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . stage-in = 0 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . payload execution = 14232 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . stage-out = 1 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | . log creation = 0 s
[2026-04-27 18:05:30] 2026-04-27 15:59:39,664 | INFO     | ..............................
[2026-04-27 18:05:30] 2026-04-27 15:59:40,124 | INFO     | 
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | job summary report
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | --------------------------------------------------
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | PanDA job id: 7114722631
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | task id: 49863860
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | errors: (none)
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 18:05:30] 2026-04-27 15:59:40,125 | INFO     | pilot state: finished 
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | transexitcode: 0
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | exeerrorcode: 0
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | exeerrordiag: 
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | exitcode: 0
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | exitmsg: OK
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | cpuconsumptiontime: 54954 s
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | nevents: 400
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | neventsw: 0
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | pid: 3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | pgrp: 3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | corecount: 4
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | event service: False
[2026-04-27 18:05:30] 2026-04-27 15:59:40,126 | INFO     | sizes: {0: 2278289, 1: 2280118, 11: 2280118, 14246: 2310786, 14247: 2315959, 14248: 2316097}
[2026-04-27 18:05:30] 2026-04-27 15:59:40,127 | INFO     | --------------------------------------------------
[2026-04-27 18:05:30] 2026-04-27 15:59:40,127 | INFO     | 
[2026-04-27 18:05:30] 2026-04-27 15:59:40,127 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-04-27 18:05:30] 2026-04-27 15:59:40,151 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 18:05:30] 2026-04-27 15:59:40,153 | INFO     | job 7114722631 has completed (purged errors)
[2026-04-27 18:05:30] 2026-04-27 15:59:40,154 | INFO     | overall cleanup function is called
[2026-04-27 18:05:30] 2026-04-27 15:59:40,411 | WARNING  | process 3366417 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 18:05:30] 2026-04-27 15:59:40,699 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 18:05:30] 2026-04-27 15:59:41,007 | INFO     | number of running child processes to parent process 3366417: 1
[2026-04-27 18:05:30] 2026-04-27 15:59:41,007 | INFO     | maximum number of monitored processes: 6
[2026-04-27 18:05:30] 2026-04-27 15:59:41,007 | INFO     | aborting job monitoring since job object (job id=7114722631) has expired
[2026-04-27 18:05:30] 2026-04-27 15:59:41,163 | INFO     | --- collectZombieJob: --- 10, [3366417]
[2026-04-27 18:05:30] 2026-04-27 15:59:41,163 | INFO     | zombie collector waiting for pid 3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:41,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 18:05:30] 2026-04-27 15:59:41,164 | INFO     | collected zombie processes
[2026-04-27 18:05:30] 2026-04-27 15:59:41,164 | INFO     | will attempt to kill all subprocesses of pid=3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:41,446 | INFO     | process IDs to be killed: [3366417] (in reverse order)
[2026-04-27 18:05:30] 2026-04-27 15:59:41,570 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 18:05:30] 2026-04-27 15:59:41,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 18:05:30] 2026-04-27 15:59:41,583 | INFO     | did not find any defunct processes belonging to 3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:41,594 | INFO     | did not find any defunct processes belonging to 3366417
[2026-04-27 18:05:30] 2026-04-27 15:59:41,595 | INFO     | Ready for new job
[2026-04-27 18:05:30] 2026-04-27 15:59:41,597 | INFO     | ***************************************
[2026-04-27 18:05:30] 2026-04-27 15:59:41,597 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 18:05:30] 2026-04-27 15:59:41,597 | INFO     | ***************************************
[2026-04-27 18:05:30] 2026-04-27 15:59:41,597 | INFO     | 
[2026-04-27 18:05:30] 2026-04-27 15:59:41,601 | INFO     | architecture information:
[2026-04-27 18:05:30] 2026-04-27 15:59:41,601 | INFO     | executing command: cat /etc/os-release
[2026-04-27 18:05:30] 2026-04-27 15:59:41,617 | INFO     | cat /etc/os-release:
[2026-04-27 18:05:30] NAME="CentOS Linux"
[2026-04-27 18:05:30] VERSION="7 (Core)"
[2026-04-27 18:05:30] ID="centos"
[2026-04-27 18:05:30] ID_LIKE="rhel fedora"
[2026-04-27 18:05:30] VERSION_ID="7"
[2026-04-27 18:05:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 18:05:30] ANSI_COLOR="0;31"
[2026-04-27 18:05:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 18:05:30] HOME_URL="https://www.centos.org/"
[2026-04-27 18:05:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 18:05:30] 
[2026-04-27 18:05:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 18:05:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 18:05:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 18:05:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 18:05:30] 
[2026-04-27 18:05:30] 2026-04-27 15:59:41,617 | INFO     | ***************************************
[2026-04-27 18:05:30] 2026-04-27 15:59:42,119 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-04-27 18:05:30] 2026-04-27 15:59:42,137 | INFO     | sufficient remaining disk space (18742247424 B)
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | INFO     | update_server=False
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 18:05:30] 2026-04-27 15:59:42,138 | INFO     | aborting loop
[2026-04-27 18:05:30] 2026-04-27 15:59:42,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 18:05:30] 2026-04-27 15:59:42,547 | INFO     | all data control threads have been joined
[2026-04-27 18:05:30] 2026-04-27 15:59:42,558 | INFO     | all payload control threads have been joined
[2026-04-27 18:05:30] 2026-04-27 15:59:42,827 | INFO     | job.realtimelogging is not enabled
[2026-04-27 18:05:30] 2026-04-27 15:59:43,141 | INFO     | [job] retrieve thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,142 | INFO     | [job] job monitor thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,278 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,333 | INFO     | [payload] failed_post thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,469 | INFO     | [data] copytool_in thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,523 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,552 | INFO     | [data] control thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,562 | INFO     | all job control threads have been joined
[2026-04-27 18:05:30] 2026-04-27 15:59:43,563 | INFO     | [payload] control thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,832 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:43,975 | INFO     | [job] validate thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:44,217 | INFO     | [payload] validate_post thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:44,477 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:44,538 | INFO     | [data] copytool_out thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:44,567 | INFO     | [job] control thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:44,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 18:05:30] 2026-04-27 15:59:45,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 18:05:30] 2026-04-27 15:59:45,775 | INFO     | [job] queue monitor thread has finished
[2026-04-27 18:05:30] 2026-04-27 15:59:49,636 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 18:05:30] 2026-04-27 16:00:13,082 | INFO     | PID=3361270 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 18:05:30] 2026-04-27 16:00:13,083 | INFO     | .. there are 11 such processes running
[2026-04-27 18:05:30] 2026-04-27 16:00:13,083 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 18:05:30] 2026-04-27 16:00:13,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 18:05:30] 2026-04-27 16:00:13,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 18:05:30] 2026-04-27 16:00:24,411 | INFO     | [monitor] cgroup control has ended
[2026-04-27 18:05:30] 2026-04-27 16:00:25,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22665670190912)>', '<ExcThread(monitor, started 22665430832896)>']
[2026-04-27 18:05:30] 2026-04-27 16:00:26,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 18:05:30] 2026-04-27 16:00:26,148 | INFO     | [monitor] control thread has ended
[2026-04-27 18:05:30] 2026-04-27 16:00:30,435 | INFO     | all workflow threads have been joined
[2026-04-27 18:05:30] 2026-04-27 16:00:30,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 18:05:30] 2026-04-27 16:00:30,436 | INFO     | traces error code: 0
[2026-04-27 18:05:30] 2026-04-27 16:00:30,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 18:05:30] 2026-04-27 16:00:30,601 [wrapper] ==== pilot stdout END ====
[2026-04-27 18:05:30] 2026-04-27 16:00:30,604 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 18:05:30] 2026-04-27 16:00:30,607 [wrapper] pilotpid: 3361270
[2026-04-27 18:05:30] 2026-04-27 16:00:30,609 [wrapper] Pilot exit status: 0
[2026-04-27 18:05:30] 2026-04-27 16:00:30,619 [wrapper] pandaids: 7114722631
[2026-04-27 18:05:30] 2026-04-27 16:00:30,695 [wrapper] cleanup supervisor_pilot 3596966 3361271
[2026-04-27 18:05:30] 2026-04-27 16:00:30,698 [wrapper] Test setup, not cleaning
[2026-04-27 18:05:30] 2026-04-27 16:00:30,700 [wrapper] apfmon messages muted
[2026-04-27 18:05:30] 2026-04-27 16:00:30,704 [wrapper] ==== wrapper stdout END ====
[2026-04-27 18:05:30] 2026-04-27 16:00:30,706 [wrapper] ==== wrapper stderr END ====
[2026-04-27 18:05:30]  *** Error codes and diagnostics ***
[2026-04-27 18:05:30]     "exeErrorCode": 0,
[2026-04-27 18:05:30]     "pilotErrorCode": 0,
[2026-04-27 18:05:30]  *** Listing of results directory ***
[2026-04-27 18:05:30] total 469884
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc    683926 Apr 26 16:58 pilot3.tar.gz
[2026-04-27 18:05:30] -rwx------. 1 boinc boinc     36322 Apr 26 17:01 runpilot2-wrapper.sh
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc      5631 Apr 26 17:03 queuedata.json
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc       100 Apr 27 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 18:05:30] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 14:01 run_atlas
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc       105 Apr 27 14:01 job.xml
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc 261217084 Apr 27 14:01 EVNT.49863858._000020.pool.root.1
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc      6482 Apr 27 14:01 init_data.xml
[2026-04-27 18:05:30] drwxrwx--x. 2 boinc boinc      4096 Apr 27 14:01 shared
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc    697415 Apr 27 14:01 input.tar.gz
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc     15667 Apr 27 14:01 start_atlas.sh
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc         0 Apr 27 14:01 boinc_lockfile
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc      2586 Apr 27 14:01 pandaJob.out
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc    996913 Apr 27 14:01 agis_schedconf.cvmfs.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc       447 Apr 27 14:01 workernode_map.json
[2026-04-27 18:05:30] drwx------. 5 boinc boinc      4096 Apr 27 14:02 pilot3
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc 212425422 Apr 27 17:58 HITS.49863860._000494.pool.root.1
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc       487 Apr 27 17:59 boinc_task_state.xml
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc      1035 Apr 27 17:59 memory_monitor_summary.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc        95 Apr 27 17:59 pilot_heartbeat.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc   1508585 Apr 27 17:59 agis_ddmendpoints.agis.ALL.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc    345284 Apr 27 17:59 log.49863860._000494.job.log.tgz.1
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc      6417 Apr 27 17:59 heartbeat_new.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc      6308 Apr 27 17:59 heartbeat.json
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc      4904 Apr 27 18:00 pilotlog.txt
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc   1344910 Apr 27 18:00 log.49863860._000494.job.log.1
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc       357 Apr 27 18:00 output.list
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc       410 Apr 27 18:00 runtime_log
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc   1710080 Apr 27 18:00 result.tar.gz
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc      8828 Apr 27 18:00 runtime_log.err
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc       666 Apr 27 18:00 28dead1fcb71.diag
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc        27 Apr 27 18:05 wrapper_checkpoint.txt
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc      8192 Apr 27 18:05 boinc_mmap_file
[2026-04-27 18:05:30] -rw-r--r--. 1 boinc boinc     20805 Apr 27 18:05 stderr.txt
[2026-04-27 18:05:30] HITS file was successfully produced:
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc 212425422 Apr 27 17:58 shared/HITS.pool.root.1
[2026-04-27 18:05:30]  *** Contents of shared directory: ***
[2026-04-27 18:05:30] total 464924
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc 261217084 Apr 27 14:01 ATLAS.root_0
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc    697415 Apr 27 14:01 input.tar.gz
[2026-04-27 18:05:30] -rw-r--r--. 2 boinc boinc     15667 Apr 27 14:01 start_atlas.sh
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc 212425422 Apr 27 17:58 HITS.pool.root.1
[2026-04-27 18:05:30] -rw-------. 1 boinc boinc   1710080 Apr 27 18:00 result.tar.gz
18:05:31 (3357049): run_atlas exited; CPU time 55490.935817
18:05:31 (3357049): called boinc_finish(0)

</stderr_txt>
]]>

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