Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:45:01 (1605976): wrapper (7.7.26015): starting
11:45:01 (1605976): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 11:45:01] Arguments: --nthreads 4
[2026-04-27 11:45:01] Threads: 4
[2026-04-27 11:45:01] Checking for CVMFS
[2026-04-27 11:45:01] No cvmfs_config command found, will try listing directly
[2026-04-27 11:45:01] CVMFS is ok
[2026-04-27 11:45:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 11:45:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 11:45:01] Further information can be found at the LHC@home message board.
[2026-04-27 11:45:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 11:45:01] Checking for apptainer binary...
[2026-04-27 11:45:01] which: no apptainer in ((null))
[2026-04-27 11:45:01] apptainer is not installed, using version from CVMFS
[2026-04-27 11:45:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 11:45:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-04-27 11:45:02] apptainer works
[2026-04-27 11:45:02] Set ATHENA_PROC_NUMBER=4
[2026-04-27 11:45:02] Set ATHENA_CORE_NUMBER=4
[2026-04-27 11:45:02] Starting ATLAS job with PandaID=7105844184
[2026-04-27 11:45:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 16:06:25]  *** The last 200 lines of the pilot log: ***
[2026-04-27 16:06:25] 2026-04-27 13:59:01,100 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/0/workernode_map.json
[2026-04-27 16:06:25] 2026-04-27 13:59:01,101 | INFO     | this job has now completed (state=finished)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,101 | INFO     | log transfer has been attempted: DONE
[2026-04-27 16:06:25] 2026-04-27 13:59:01,101 | INFO     | job 7105844184 has finished - writing final server update
[2026-04-27 16:06:25] 2026-04-27 13:59:01,101 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3480570/.job.ad'
[2026-04-27 16:06:25] 2026-04-27 13:59:01,102 | INFO     | total number of processed events: 400 (read)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,113 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7105844184/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,114 | INFO     | extracted standard info from prmon json
[2026-04-27 16:06:25] 2026-04-27 13:59:01,114 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 16:06:25] 2026-04-27 13:59:01,114 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 16:06:25] 2026-04-27 13:59:01,115 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 16:06:25] 2026-04-27 13:59:01,119 | INFO     | fitting pss+swap vs Time
[2026-04-27 16:06:25] 2026-04-27 13:59:01,119 | INFO     | sum of square deviations: 4787066500.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,121 | INFO     | sum of deviations: 31629140743.999996
[2026-04-27 16:06:25] 2026-04-27 13:59:01,121 | INFO     | mean x (centered): 0.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,121 | INFO     | mean y: 2326432.8554216865
[2026-04-27 16:06:25] 2026-04-27 13:59:01,121 | INFO     | intersect: 2326432.8554216865
[2026-04-27 16:06:25] 2026-04-27 13:59:01,122 | INFO     | chi2: 1.3695440961125174
[2026-04-27 16:06:25] 2026-04-27 13:59:01,122 | INFO     | sum of square deviations: 4504437945.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,124 | INFO     | sum of deviations: 30896385960.5
[2026-04-27 16:06:25] 2026-04-27 13:59:01,124 | INFO     | mean x (centered): 0.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,124 | INFO     | mean y: 2326037.3893442624
[2026-04-27 16:06:25] 2026-04-27 13:59:01,124 | INFO     | intersect: 2326037.3893442624
[2026-04-27 16:06:25] 2026-04-27 13:59:01,124 | INFO     | chi2: 1.370082557236881
[2026-04-27 16:06:25] 2026-04-27 13:59:01,125 | INFO     | current chi2=1.370082557236881 (change=-0.039316815419975594 %)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,125 | INFO     | right removable region: 243
[2026-04-27 16:06:25] 2026-04-27 13:59:01,125 | INFO     | sum of square deviations: 4504437945.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,127 | INFO     | sum of deviations: -1256606618.5000076
[2026-04-27 16:06:25] 2026-04-27 13:59:01,127 | INFO     | mean x (centered): 0.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,127 | INFO     | mean y: 2343998.774590164
[2026-04-27 16:06:25] 2026-04-27 13:59:01,127 | INFO     | intersect: 2343998.774590164
[2026-04-27 16:06:25] 2026-04-27 13:59:01,127 | INFO     | chi2: 0.023272196120896246
[2026-04-27 16:06:25] 2026-04-27 13:59:01,128 | INFO     | current chi2=0.023272196120896246 (change=98.30073407735065 %)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,128 | INFO     | sum of square deviations: 4233158440.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,129 | INFO     | sum of deviations: -668567014.9999995
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | mean x (centered): 0.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | mean y: 2343653.338912134
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | intersect: 2343653.338912134
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | chi2: 0.01891757665481796
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | current chi2=0.01891757665481796 (change=18.711682573731185 %)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,130 | INFO     | left removable region: 10
[2026-04-27 16:06:25] 2026-04-27 13:59:01,131 | INFO     | sum of square deviations: 3922276332.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,132 | INFO     | sum of deviations: -762126313.9999998
[2026-04-27 16:06:25] 2026-04-27 13:59:01,132 | INFO     | mean x (centered): 0.0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,133 | INFO     | mean y: 2343598.180257511
[2026-04-27 16:06:25] 2026-04-27 13:59:01,133 | INFO     | intersect: 2343598.180257511
[2026-04-27 16:06:25] 2026-04-27 13:59:01,133 | INFO     | chi2: 0.01890227216449773
[2026-04-27 16:06:25] 2026-04-27 13:59:01,133 | INFO     | current memory leak: -0.19 B/s (using 233 data points, chi2=0.02)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | could have reported an average CPU frequency of 2551 MHz (12 samples)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | ..............................
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . Timing measurements:
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . get job = 0 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . initial setup = 6 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . payload setup = 10 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . stage-in = 0 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . payload execution = 15189 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,134 | INFO     | . stage-out = 1 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,135 | INFO     | . log creation = 0 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,135 | INFO     | ..............................
[2026-04-27 16:06:25] 2026-04-27 13:59:01,270 | INFO     | 
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | job summary report
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | --------------------------------------------------
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | PanDA job id: 7105844184
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | task id: 49645815
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | errors: (none)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | pilot state: finished 
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | transexitcode: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | exeerrorcode: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | exeerrordiag: 
[2026-04-27 16:06:25] 2026-04-27 13:59:01,271 | INFO     | exitcode: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | exitmsg: OK
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | cpuconsumptiontime: 57579 s
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | nevents: 400
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | neventsw: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | pid: 1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | pgrp: 1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | corecount: 4
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | event service: False
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | sizes: {0: 2274898, 1: 2276472, 11: 2276500, 15204: 2307472, 15205: 2316196, 15206: 2316252, 15209: 2316574}
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | --------------------------------------------------
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | 
[2026-04-27 16:06:25] 2026-04-27 13:59:01,272 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-27 16:06:25] 2026-04-27 13:59:01,294 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,296 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 16:06:25] 2026-04-27 13:59:01,297 | INFO     | job 7105844184 has completed (purged errors)
[2026-04-27 16:06:25] 2026-04-27 13:59:01,297 | INFO     | overall cleanup function is called
[2026-04-27 16:06:25] 2026-04-27 13:59:01,781 | WARNING  | process 1623750 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 16:06:25] 2026-04-27 13:59:02,052 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 16:06:25] 2026-04-27 13:59:02,305 | INFO     | --- collectZombieJob: --- 10, [1623750]
[2026-04-27 16:06:25] 2026-04-27 13:59:02,305 | INFO     | zombie collector waiting for pid 1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:02,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 16:06:25] 2026-04-27 13:59:02,305 | INFO     | collected zombie processes
[2026-04-27 16:06:25] 2026-04-27 13:59:02,305 | INFO     | will attempt to kill all subprocesses of pid=1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:02,446 | INFO     | number of running child processes to parent process 1623750: 1
[2026-04-27 16:06:25] 2026-04-27 13:59:02,446 | INFO     | maximum number of monitored processes: 6
[2026-04-27 16:06:25] 2026-04-27 13:59:02,447 | INFO     | aborting job monitoring since job object (job id=7105844184) has expired
[2026-04-27 16:06:25] 2026-04-27 13:59:02,687 | INFO     | process IDs to be killed: [1623750] (in reverse order)
[2026-04-27 16:06:25] 2026-04-27 13:59:02,832 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 16:06:25] 2026-04-27 13:59:02,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 16:06:25] 2026-04-27 13:59:02,845 | INFO     | did not find any defunct processes belonging to 1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:02,857 | INFO     | did not find any defunct processes belonging to 1623750
[2026-04-27 16:06:25] 2026-04-27 13:59:02,857 | INFO     | Ready for new job
[2026-04-27 16:06:25] 2026-04-27 13:59:02,859 | INFO     | ***************************************
[2026-04-27 16:06:25] 2026-04-27 13:59:02,859 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 16:06:25] 2026-04-27 13:59:02,859 | INFO     | ***************************************
[2026-04-27 16:06:25] 2026-04-27 13:59:02,859 | INFO     | 
[2026-04-27 16:06:25] 2026-04-27 13:59:02,863 | INFO     | architecture information:
[2026-04-27 16:06:25] 2026-04-27 13:59:02,863 | INFO     | executing command: cat /etc/os-release
[2026-04-27 16:06:25] 2026-04-27 13:59:02,878 | INFO     | cat /etc/os-release:
[2026-04-27 16:06:25] NAME="CentOS Linux"
[2026-04-27 16:06:25] VERSION="7 (Core)"
[2026-04-27 16:06:25] ID="centos"
[2026-04-27 16:06:25] ID_LIKE="rhel fedora"
[2026-04-27 16:06:25] VERSION_ID="7"
[2026-04-27 16:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 16:06:25] ANSI_COLOR="0;31"
[2026-04-27 16:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 16:06:25] HOME_URL="https://www.centos.org/"
[2026-04-27 16:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 16:06:25] 
[2026-04-27 16:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 16:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 16:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 16:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 16:06:25] 
[2026-04-27 16:06:25] 2026-04-27 13:59:02,879 | INFO     | ***************************************
[2026-04-27 16:06:25] 2026-04-27 13:59:03,379 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-27 16:06:25] 2026-04-27 13:59:03,396 | INFO     | sufficient remaining disk space (19332595712 B)
[2026-04-27 16:06:25] 2026-04-27 13:59:03,396 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 16:06:25] 2026-04-27 13:59:03,396 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 16:06:25] 2026-04-27 13:59:03,396 | INFO     | update_server=False
[2026-04-27 16:06:25] 2026-04-27 13:59:03,396 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 16:06:25] 2026-04-27 13:59:03,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 16:06:25] 2026-04-27 13:59:03,397 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:06:25] 2026-04-27 13:59:03,397 | INFO     | will abort loop
[2026-04-27 16:06:25] 2026-04-27 13:59:04,031 | INFO     | all payload control threads have been joined
[2026-04-27 16:06:25] 2026-04-27 13:59:04,215 | INFO     | all job control threads have been joined
[2026-04-27 16:06:25] 2026-04-27 13:59:04,246 | INFO     | all data control threads have been joined
[2026-04-27 16:06:25] 2026-04-27 13:59:04,399 | INFO     | [job] retrieve thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:04,403 | INFO     | [job] job monitor thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:04,420 | INFO     | [payload] failed_post thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:04,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 16:06:25] 2026-04-27 13:59:04,601 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:04,730 | INFO     | [payload] validate_post thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:04,900 | INFO     | [data] copytool_in thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,034 | INFO     | [payload] control thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,220 | INFO     | [job] control thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,251 | INFO     | [data] control thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,400 | INFO     | [data] copytool_out thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,526 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,649 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:05,706 | INFO     | [job] validate thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:06,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 16:06:25] 2026-04-27 13:59:07,239 | INFO     | [job] queue monitor thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:08,541 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:14,175 | INFO     | job.realtimelogging is not enabled
[2026-04-27 16:06:25] 2026-04-27 13:59:15,180 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 16:06:25] 2026-04-27 13:59:33,811 | INFO     | PID=1612525 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 16:06:25] 2026-04-27 13:59:33,812 | INFO     | .. there are 11 such processes running
[2026-04-27 16:06:25] 2026-04-27 13:59:33,813 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 16:06:25] 2026-04-27 13:59:33,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 16:06:25] 2026-04-27 13:59:33,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 16:06:25] 2026-04-27 13:59:45,713 | INFO     | [monitor] cgroup control has ended
[2026-04-27 16:06:25] 2026-04-27 13:59:46,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23439947622208)>', '<ExcThread(monitor, started 23439643494144)>']
[2026-04-27 16:06:25] 2026-04-27 13:59:46,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 16:06:25] 2026-04-27 13:59:46,878 | INFO     | [monitor] control thread has ended
[2026-04-27 16:06:25] 2026-04-27 13:59:51,054 | INFO     | all workflow threads have been joined
[2026-04-27 16:06:25] 2026-04-27 13:59:51,054 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 16:06:25] 2026-04-27 13:59:51,054 | INFO     | traces error code: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:51,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 16:06:25] 2026-04-27 13:59:51,190 [wrapper] ==== pilot stdout END ====
[2026-04-27 16:06:25] 2026-04-27 13:59:51,192 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 16:06:25] 2026-04-27 13:59:51,195 [wrapper] pilotpid: 1612525
[2026-04-27 16:06:25] 2026-04-27 13:59:51,198 [wrapper] Pilot exit status: 0
[2026-04-27 16:06:25] 2026-04-27 13:59:51,209 [wrapper] pandaids: 7105844184
[2026-04-27 16:06:25] 2026-04-27 13:59:51,286 [wrapper] cleanup supervisor_pilot 1834062 1612526
[2026-04-27 16:06:25] 2026-04-27 13:59:51,290 [wrapper] Test setup, not cleaning
[2026-04-27 16:06:25] 2026-04-27 13:59:51,292 [wrapper] apfmon messages muted
[2026-04-27 16:06:25] 2026-04-27 13:59:51,295 [wrapper] ==== wrapper stdout END ====
[2026-04-27 16:06:25] 2026-04-27 13:59:51,297 [wrapper] ==== wrapper stderr END ====
[2026-04-27 16:06:25]  *** Error codes and diagnostics ***
[2026-04-27 16:06:25]     "exeErrorCode": 0,
[2026-04-27 16:06:25]     "pilotErrorCode": 0,
[2026-04-27 16:06:25]  *** Listing of results directory ***
[2026-04-27 16:06:25] total 425184
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-27 16:06:25] -rwx------. 1 boinc boinc     36322 Apr 26 15:55 runpilot2-wrapper.sh
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc      5631 Apr 26 16:04 queuedata.json
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc       100 Apr 27 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 16:06:25] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 11:44 run_atlas
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc       105 Apr 27 11:44 job.xml
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc      6483 Apr 27 11:45 init_data.xml
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc 227384218 Apr 27 11:45 EVNT.48629115._000571.pool.root.1
[2026-04-27 16:06:25] drwxrwx--x. 2 boinc boinc      4096 Apr 27 11:45 shared
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc    697442 Apr 27 11:45 input.tar.gz
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc     15667 Apr 27 11:45 start_atlas.sh
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc         0 Apr 27 11:45 boinc_lockfile
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc      2630 Apr 27 11:45 pandaJob.out
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc    996863 Apr 27 11:45 agis_schedconf.cvmfs.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc       452 Apr 27 11:45 workernode_map.json
[2026-04-27 16:06:25] drwx------. 5 boinc boinc      4096 Apr 27 11:45 pilot3
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc 200342074 Apr 27 15:58 HITS.49645815._021891.pool.root.1
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc       487 Apr 27 15:58 boinc_task_state.xml
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc      1035 Apr 27 15:58 memory_monitor_summary.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc   1508585 Apr 27 15:58 agis_ddmendpoints.agis.ALL.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc    354078 Apr 27 15:58 log.49645815._021891.job.log.tgz.1
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc      6429 Apr 27 15:59 heartbeat_new.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc      6320 Apr 27 15:59 heartbeat.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc        95 Apr 27 15:59 pilot_heartbeat.json
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc      4906 Apr 27 15:59 pilotlog.txt
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc   1412301 Apr 27 15:59 log.49645815._021891.job.log.1
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc       357 Apr 27 15:59 output.list
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc       410 Apr 27 15:59 runtime_log
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc   1781760 Apr 27 15:59 result.tar.gz
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc       665 Apr 27 15:59 193f4f788ede.diag
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc      8828 Apr 27 15:59 runtime_log.err
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc        27 Apr 27 16:06 wrapper_checkpoint.txt
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc      8192 Apr 27 16:06 boinc_mmap_file
[2026-04-27 16:06:25] -rw-r--r--. 1 boinc boinc     21077 Apr 27 16:06 stderr.txt
[2026-04-27 16:06:25] HITS file was successfully produced:
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc 200342074 Apr 27 15:58 shared/HITS.pool.root.1
[2026-04-27 16:06:25]  *** Contents of shared directory: ***
[2026-04-27 16:06:25] total 420152
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc 227384218 Apr 27 11:45 ATLAS.root_0
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc    697442 Apr 27 11:45 input.tar.gz
[2026-04-27 16:06:25] -rw-r--r--. 2 boinc boinc     15667 Apr 27 11:45 start_atlas.sh
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc 200342074 Apr 27 15:58 HITS.pool.root.1
[2026-04-27 16:06:25] -rw-------. 1 boinc boinc   1781760 Apr 27 15:59 result.tar.gz
16:06:27 (1605976): run_atlas exited; CPU time 58135.777355
16:06:27 (1605976): called boinc_finish(0)

</stderr_txt>
]]>

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