Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:10 (2105918): wrapper (7.7.26015): starting
19:23:10 (2105918): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 19:23:10] Arguments: --nthreads 4
[2026-04-27 19:23:10] Threads: 4
[2026-04-27 19:23:10] Checking for CVMFS
[2026-04-27 19:23:10] No cvmfs_config command found, will try listing directly
[2026-04-27 19:23:10] CVMFS is ok
[2026-04-27 19:23:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 19:23:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 19:23:10] Further information can be found at the LHC@home message board.
[2026-04-27 19:23:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 19:23:10] Checking for apptainer binary...
[2026-04-27 19:23:10] which: no apptainer in ((null))
[2026-04-27 19:23:10] apptainer is not installed, using version from CVMFS
[2026-04-27 19:23:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 19:23:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-04-27 19:23:10] apptainer works
[2026-04-27 19:23:10] Set ATHENA_PROC_NUMBER=4
[2026-04-27 19:23:10] Set ATHENA_CORE_NUMBER=4
[2026-04-27 19:23:10] Starting ATLAS job with PandaID=7114619232
[2026-04-27 19:23:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 22:32:38]  *** The last 200 lines of the pilot log: ***
[2026-04-27 22:32:38] 2026-04-27 20:29:44,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 22:32:38] 2026-04-27 20:29:44,959 | INFO     | monitor loop #821: job 0:7114619232 is in state 'finished'
[2026-04-27 22:32:38] 2026-04-27 20:29:44,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,053 | INFO     | job 7114619232 has state=finished
[2026-04-27 22:32:38] 2026-04-27 20:29:47,053 | INFO     | preparing for final server update for job 7114619232 in state='finished'
[2026-04-27 22:32:38] 2026-04-27 20:29:47,053 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7114619232/jobReport.json
[2026-04-27 22:32:38] 2026-04-27 20:29:47,056 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/0/workernode_map.json
[2026-04-27 22:32:38] 2026-04-27 20:29:47,056 | INFO     | this job has now completed (state=finished)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,056 | INFO     | log transfer has been attempted: DONE
[2026-04-27 22:32:38] 2026-04-27 20:29:47,056 | INFO     | job 7114619232 has finished - writing final server update
[2026-04-27 22:32:38] 2026-04-27 20:29:47,057 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3480570/.job.ad'
[2026-04-27 22:32:38] 2026-04-27 20:29:47,057 | INFO     | total number of processed events: 400 (read)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,069 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7114619232/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,069 | INFO     | extracted standard info from prmon json
[2026-04-27 22:32:38] 2026-04-27 20:29:47,069 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 22:32:38] 2026-04-27 20:29:47,070 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 22:32:38] 2026-04-27 20:29:47,070 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 22:32:38] 2026-04-27 20:29:47,073 | INFO     | fitting pss+swap vs Time
[2026-04-27 22:32:38] 2026-04-27 20:29:47,074 | INFO     | sum of square deviations: 1900284932.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,075 | INFO     | sum of deviations: -2740376261.000002
[2026-04-27 22:32:38] 2026-04-27 20:29:47,075 | INFO     | mean x (centered): 0.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,075 | INFO     | mean y: 2360303.338797814
[2026-04-27 22:32:38] 2026-04-27 20:29:47,075 | INFO     | intersect: 2360303.338797814
[2026-04-27 22:32:38] 2026-04-27 20:29:47,075 | INFO     | chi2: 1.409465069071769
[2026-04-27 22:32:38] 2026-04-27 20:29:47,076 | INFO     | sum of square deviations: 1748737904.5
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | sum of deviations: -2455521693.9999967
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | mean x (centered): 0.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | mean y: 2360591.382022472
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | intersect: 2360591.382022472
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | chi2: 1.4095971561495637
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | current chi2=1.4095971561495637 (change=-0.009371433226207027 %)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,077 | INFO     | right removable region: 177
[2026-04-27 22:32:38] 2026-04-27 20:29:47,078 | INFO     | sum of square deviations: 1748737904.5
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | sum of deviations: -25771999098.500008
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | mean x (centered): 0.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | mean y: 2383141.9831460672
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | intersect: 2383141.9831460672
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | chi2: 0.07718216949547901
[2026-04-27 22:32:38] 2026-04-27 20:29:47,079 | INFO     | current chi2=0.07718216949547901 (change=94.52400976873383 %)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,080 | INFO     | sum of square deviations: 1605470102.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | sum of deviations: -23657985508.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | mean x (centered): 0.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | mean y: 2380868.023121387
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | intersect: 2380868.023121387
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | chi2: 0.07403513424422933
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | current chi2=0.07403513424422933 (change=4.077412272576789 %)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,081 | INFO     | left removable region: 10
[2026-04-27 22:32:38] 2026-04-27 20:29:47,082 | INFO     | sum of square deviations: 1444149868.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,083 | INFO     | sum of deviations: -22672598096.000004
[2026-04-27 22:32:38] 2026-04-27 20:29:47,083 | INFO     | mean x (centered): 0.0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,083 | INFO     | mean y: 2381988.155688623
[2026-04-27 22:32:38] 2026-04-27 20:29:47,083 | INFO     | intersect: 2381988.155688623
[2026-04-27 22:32:38] 2026-04-27 20:29:47,083 | INFO     | chi2: 0.07167688515689422
[2026-04-27 22:32:38] 2026-04-27 20:29:47,084 | INFO     | current memory leak: -15.70 B/s (using 167 data points, chi2=0.07)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,084 | INFO     | could have reported an average CPU frequency of 2569 MHz (10 samples)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,084 | INFO     | ..............................
[2026-04-27 22:32:38] 2026-04-27 20:29:47,084 | INFO     | . Timing measurements:
[2026-04-27 22:32:38] 2026-04-27 20:29:47,084 | INFO     | . get job = 0 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . initial setup = 5 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . payload setup = 9 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . stage-in = 0 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . payload execution = 11152 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . stage-out = 1 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | . log creation = 0 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,085 | INFO     | ..............................
[2026-04-27 22:32:38] 2026-04-27 20:29:47,199 | INFO     | 
[2026-04-27 22:32:38] 2026-04-27 20:29:47,199 | INFO     | job summary report
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | --------------------------------------------------
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | PanDA job id: 7114619232
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | task id: 49860696
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | errors: (none)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | pilot state: finished 
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | transexitcode: 0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | exeerrorcode: 0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | exeerrordiag: 
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | exitcode: 0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | exitmsg: OK
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | cpuconsumptiontime: 42842 s
[2026-04-27 22:32:38] 2026-04-27 20:29:47,200 | INFO     | nevents: 400
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | neventsw: 0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | pid: 2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | pgrp: 2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | corecount: 4
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | event service: False
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | sizes: {0: 2282429, 11: 2282429, 11165: 2311587, 11167: 2320663, 11170: 2320801}
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | --------------------------------------------------
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | 
[2026-04-27 22:32:38] 2026-04-27 20:29:47,201 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,226 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 22:32:38] 2026-04-27 20:29:47,226 | INFO     | job 7114619232 has completed (purged errors)
[2026-04-27 22:32:38] 2026-04-27 20:29:47,226 | INFO     | overall cleanup function is called
[2026-04-27 22:32:38] 2026-04-27 20:29:48,234 | INFO     | --- collectZombieJob: --- 10, [2114772]
[2026-04-27 22:32:38] 2026-04-27 20:29:48,234 | INFO     | zombie collector waiting for pid 2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:48,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 22:32:38] 2026-04-27 20:29:48,234 | INFO     | collected zombie processes
[2026-04-27 22:32:38] 2026-04-27 20:29:48,234 | INFO     | will attempt to kill all subprocesses of pid=2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:48,529 | INFO     | process IDs to be killed: [2114772] (in reverse order)
[2026-04-27 22:32:38] 2026-04-27 20:29:48,658 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 22:32:38] 2026-04-27 20:29:48,660 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 22:32:38] 2026-04-27 20:29:48,672 | INFO     | did not find any defunct processes belonging to 2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:48,684 | INFO     | did not find any defunct processes belonging to 2114772
[2026-04-27 22:32:38] 2026-04-27 20:29:48,684 | INFO     | Ready for new job
[2026-04-27 22:32:38] 2026-04-27 20:29:48,686 | INFO     | ***************************************
[2026-04-27 22:32:38] 2026-04-27 20:29:48,687 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 22:32:38] 2026-04-27 20:29:48,687 | INFO     | ***************************************
[2026-04-27 22:32:38] 2026-04-27 20:29:48,687 | INFO     | 
[2026-04-27 22:32:38] 2026-04-27 20:29:48,690 | INFO     | architecture information:
[2026-04-27 22:32:38] 2026-04-27 20:29:48,691 | INFO     | executing command: cat /etc/os-release
[2026-04-27 22:32:38] 2026-04-27 20:29:48,707 | INFO     | cat /etc/os-release:
[2026-04-27 22:32:38] NAME="CentOS Linux"
[2026-04-27 22:32:38] VERSION="7 (Core)"
[2026-04-27 22:32:38] ID="centos"
[2026-04-27 22:32:38] ID_LIKE="rhel fedora"
[2026-04-27 22:32:38] VERSION_ID="7"
[2026-04-27 22:32:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 22:32:38] ANSI_COLOR="0;31"
[2026-04-27 22:32:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 22:32:38] HOME_URL="https://www.centos.org/"
[2026-04-27 22:32:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 22:32:38] 
[2026-04-27 22:32:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 22:32:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 22:32:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 22:32:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 22:32:38] 
[2026-04-27 22:32:38] 2026-04-27 20:29:48,708 | INFO     | ***************************************
[2026-04-27 22:32:38] 2026-04-27 20:29:49,211 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-27 22:32:38] 2026-04-27 20:29:49,227 | INFO     | sufficient remaining disk space (20653801472 B)
[2026-04-27 22:32:38] 2026-04-27 20:29:49,227 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 22:32:38] 2026-04-27 20:29:49,227 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 22:32:38] 2026-04-27 20:29:49,228 | INFO     | update_server=False
[2026-04-27 22:32:38] 2026-04-27 20:29:49,228 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 22:32:38] 2026-04-27 20:29:49,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:32:38] 2026-04-27 20:29:49,228 | INFO     | aborting loop
[2026-04-27 22:32:38] 2026-04-27 20:29:49,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 22:32:38] 2026-04-27 20:29:49,517 | INFO     | all job control threads have been joined
[2026-04-27 22:32:38] 2026-04-27 20:29:50,095 | INFO     | all data control threads have been joined
[2026-04-27 22:32:38] 2026-04-27 20:29:50,232 | INFO     | [job] retrieve thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:50,233 | INFO     | [job] job monitor thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:50,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 22:32:38] 2026-04-27 20:29:50,369 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:50,422 | INFO     | all payload control threads have been joined
[2026-04-27 22:32:38] 2026-04-27 20:29:50,523 | INFO     | [job] control thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:50,653 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:50,843 | INFO     | [data] copytool_in thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,100 | INFO     | [data] control thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,297 | INFO     | [data] copytool_out thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,427 | INFO     | [payload] control thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,432 | INFO     | [job] validate thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,500 | INFO     | [payload] validate_post thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,689 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:51,692 | INFO     | [payload] failed_post thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:52,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 22:32:38] 2026-04-27 20:29:53,187 | INFO     | [job] queue monitor thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:29:54,319 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 22:32:38] 2026-04-27 20:30:19,349 | INFO     | PID=2109718 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 22:32:38] 2026-04-27 20:30:19,350 | INFO     | .. there are 10 such processes running
[2026-04-27 22:32:38] 2026-04-27 20:30:19,351 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 22:32:38] 2026-04-27 20:30:19,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 22:32:38] 2026-04-27 20:30:19,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 22:32:38] 2026-04-27 20:30:43,568 | INFO     | [monitor] cgroup control has ended
[2026-04-27 22:32:38] 2026-04-27 20:30:44,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22435380741952)>', '<ExcThread(monitor, started 22435075471104)>']
[2026-04-27 22:32:38] 2026-04-27 20:30:44,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 22:32:38] 2026-04-27 20:30:44,466 | INFO     | [monitor] control thread has ended
[2026-04-27 22:32:38] 2026-04-27 20:30:49,330 | INFO     | all workflow threads have been joined
[2026-04-27 22:32:38] 2026-04-27 20:30:49,330 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 22:32:38] 2026-04-27 20:30:49,331 | INFO     | traces error code: 0
[2026-04-27 22:32:38] 2026-04-27 20:30:49,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 22:32:38] 2026-04-27 20:30:49,478 [wrapper] ==== pilot stdout END ====
[2026-04-27 22:32:38] 2026-04-27 20:30:49,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 22:32:38] 2026-04-27 20:30:49,483 [wrapper] pilotpid: 2109718
[2026-04-27 22:32:38] 2026-04-27 20:30:49,486 [wrapper] Pilot exit status: 0
[2026-04-27 22:32:38] 2026-04-27 20:30:49,494 [wrapper] pandaids: 7114619232
[2026-04-27 22:32:38] 2026-04-27 20:30:49,569 [wrapper] cleanup supervisor_pilot 2303190 2109719
[2026-04-27 22:32:38] 2026-04-27 20:30:49,572 [wrapper] Test setup, not cleaning
[2026-04-27 22:32:38] 2026-04-27 20:30:49,574 [wrapper] apfmon messages muted
[2026-04-27 22:32:38] 2026-04-27 20:30:49,577 [wrapper] ==== wrapper stdout END ====
[2026-04-27 22:32:38] 2026-04-27 20:30:49,579 [wrapper] ==== wrapper stderr END ====
[2026-04-27 22:32:38]  *** Error codes and diagnostics ***
[2026-04-27 22:32:38]     "exeErrorCode": 0,
[2026-04-27 22:32:38]     "pilotErrorCode": 0,
[2026-04-27 22:32:38]  *** Listing of results directory ***
[2026-04-27 22:32:38] total 476584
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-27 22:32:38] -rwx------. 1 boinc boinc     36322 Apr 26 15:55 runpilot2-wrapper.sh
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc      5631 Apr 26 16:04 queuedata.json
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc       100 Apr 27 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 22:32:38] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 19:23 run_atlas
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc       105 Apr 27 19:23 job.xml
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc      6483 Apr 27 19:23 init_data.xml
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc 302873215 Apr 27 19:23 EVNT.48751990._000002.pool.root.1
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc     15667 Apr 27 19:23 start_atlas.sh
[2026-04-27 22:32:38] drwxrwx--x. 2 boinc boinc      4096 Apr 27 19:23 shared
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc    697392 Apr 27 19:23 input.tar.gz
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc         0 Apr 27 19:23 boinc_lockfile
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc      2519 Apr 27 19:23 pandaJob.out
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc    997771 Apr 27 19:23 agis_schedconf.cvmfs.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc       447 Apr 27 19:23 workernode_map.json
[2026-04-27 22:32:38] drwx------. 5 boinc boinc      4096 Apr 27 19:23 pilot3
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc 178264298 Apr 27 22:29 HITS.49860696._000041.pool.root.1
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc       486 Apr 27 22:29 boinc_task_state.xml
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc      1048 Apr 27 22:29 memory_monitor_summary.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc   1512704 Apr 27 22:29 agis_ddmendpoints.agis.ALL.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc    310230 Apr 27 22:29 log.49860696._000041.job.log.tgz.1
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc        95 Apr 27 22:29 pilot_heartbeat.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc      6415 Apr 27 22:29 heartbeat_new.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc      6306 Apr 27 22:29 heartbeat.json
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc      4832 Apr 27 22:30 pilotlog.txt
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc   1062135 Apr 27 22:30 log.49860696._000041.job.log.1
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc       357 Apr 27 22:30 output.list
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc       410 Apr 27 22:30 runtime_log
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc   1392640 Apr 27 22:30 result.tar.gz
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc      8828 Apr 27 22:30 runtime_log.err
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc       664 Apr 27 22:30 1937b27759db.diag
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc        26 Apr 27 22:32 wrapper_checkpoint.txt
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc      8192 Apr 27 22:32 boinc_mmap_file
[2026-04-27 22:32:38] -rw-r--r--. 1 boinc boinc     21082 Apr 27 22:32 stderr.txt
[2026-04-27 22:32:38] HITS file was successfully produced:
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc 178264298 Apr 27 22:29 shared/HITS.pool.root.1
[2026-04-27 22:32:38]  *** Contents of shared directory: ***
[2026-04-27 22:32:38] total 471932
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc 302873215 Apr 27 19:23 ATLAS.root_0
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc     15667 Apr 27 19:23 start_atlas.sh
[2026-04-27 22:32:38] -rw-r--r--. 2 boinc boinc    697392 Apr 27 19:23 input.tar.gz
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc 178264298 Apr 27 22:29 HITS.pool.root.1
[2026-04-27 22:32:38] -rw-------. 1 boinc boinc   1392640 Apr 27 22:30 result.tar.gz
22:32:40 (2105918): run_atlas exited; CPU time 43258.958104
22:32:40 (2105918): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN