Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:17:09 (928383): wrapper (7.7.26015): starting
02:17:09 (928383): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 02:17:09] Arguments: --nthreads 4
[2026-04-27 02:17:09] Threads: 4
[2026-04-27 02:17:09] Checking for CVMFS
[2026-04-27 02:17:09] No cvmfs_config command found, will try listing directly
[2026-04-27 02:17:09] CVMFS is ok
[2026-04-27 02:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 02:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 02:17:09] Further information can be found at the LHC@home message board.
[2026-04-27 02:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 02:17:09] Checking for apptainer binary...
[2026-04-27 02:17:09] which: no apptainer in ((null))
[2026-04-27 02:17:09] apptainer is not installed, using version from CVMFS
[2026-04-27 02:17:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 02:17:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-04-27 02:17:09] apptainer works
[2026-04-27 02:17:09] Set ATHENA_PROC_NUMBER=4
[2026-04-27 02:17:09] Set ATHENA_CORE_NUMBER=4
[2026-04-27 02:17:09] Starting ATLAS job with PandaID=7114608942
[2026-04-27 02:17:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 07:51:13]  *** The last 200 lines of the pilot log: ***
[2026-04-27 07:51:13] 2026-04-27 05:50:14,630 | INFO     | reading metadata from: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7114608942/jobReport.json
[2026-04-27 07:51:13] 2026-04-27 05:50:14,633 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot32/slots/0/workernode_map.json
[2026-04-27 07:51:13] 2026-04-27 05:50:14,633 | INFO     | this job has now completed (state=finished)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,633 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,633 | INFO     | log transfer has been attempted: DONE
[2026-04-27 07:51:13] 2026-04-27 05:50:14,633 | INFO     | job 7114608942 has finished - writing final server update
[2026-04-27 07:51:13] 2026-04-27 05:50:14,634 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3480570/.job.ad'
[2026-04-27 07:51:13] 2026-04-27 05:50:14,634 | INFO     | total number of processed events: 400 (read)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,646 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7114608942/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,647 | INFO     | extracted standard info from prmon json
[2026-04-27 07:51:13] 2026-04-27 05:50:14,647 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 07:51:13] 2026-04-27 05:50:14,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 07:51:13] 2026-04-27 05:50:14,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 07:51:13] 2026-04-27 05:50:14,654 | INFO     | fitting pss+swap vs Time
[2026-04-27 07:51:13] 2026-04-27 05:50:14,654 | INFO     | sum of square deviations: 10842205148.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,657 | INFO     | sum of deviations: -41302628775.00001
[2026-04-27 07:51:13] 2026-04-27 05:50:14,657 | INFO     | mean x (centered): 0.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,657 | INFO     | mean y: 2392701.981651376
[2026-04-27 07:51:13] 2026-04-27 05:50:14,657 | INFO     | intersect: 2392701.981651376
[2026-04-27 07:51:13] 2026-04-27 05:50:14,658 | INFO     | chi2: 1.5156642721587186
[2026-04-27 07:51:13] 2026-04-27 05:50:14,658 | INFO     | sum of square deviations: 10352419220.5
[2026-04-27 07:51:13] 2026-04-27 05:50:14,661 | INFO     | sum of deviations: -40831581224.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,661 | INFO     | mean x (centered): 0.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,661 | INFO     | mean y: 2392848.645962733
[2026-04-27 07:51:13] 2026-04-27 05:50:14,661 | INFO     | intersect: 2392848.645962733
[2026-04-27 07:51:13] 2026-04-27 05:50:14,662 | INFO     | chi2: 1.5139021981710872
[2026-04-27 07:51:13] 2026-04-27 05:50:14,662 | INFO     | current chi2=1.5139021981710872 (change=0.11625753935083018 %)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,662 | INFO     | right removable region: 321
[2026-04-27 07:51:13] 2026-04-27 05:50:14,663 | INFO     | sum of square deviations: 10352419220.5
[2026-04-27 07:51:13] 2026-04-27 05:50:14,665 | INFO     | sum of deviations: -76812785420.50003
[2026-04-27 07:51:13] 2026-04-27 05:50:14,665 | INFO     | mean x (centered): 0.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,666 | INFO     | mean y: 2403643.5248447205
[2026-04-27 07:51:13] 2026-04-27 05:50:14,666 | INFO     | intersect: 2403643.5248447205
[2026-04-27 07:51:13] 2026-04-27 05:50:14,666 | INFO     | chi2: 0.27769118988258734
[2026-04-27 07:51:13] 2026-04-27 05:50:14,666 | INFO     | current chi2=0.27769118988258734 (change=81.67858179522305 %)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,667 | INFO     | sum of square deviations: 9877610318.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,669 | INFO     | sum of deviations: -64171746605.99997
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | mean x (centered): 0.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | mean y: 2399573.851735016
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | intersect: 2399573.851735016
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | chi2: 0.24399256523350424
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | current chi2=0.24399256523350424 (change=12.135287642121979 %)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,670 | INFO     | left removable region: 10
[2026-04-27 07:51:13] 2026-04-27 05:50:14,671 | INFO     | sum of square deviations: 9327281860.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,674 | INFO     | sum of deviations: -63228898885.99999
[2026-04-27 07:51:13] 2026-04-27 05:50:14,674 | INFO     | mean x (centered): 0.0
[2026-04-27 07:51:13] 2026-04-27 05:50:14,674 | INFO     | mean y: 2399887.379421222
[2026-04-27 07:51:13] 2026-04-27 05:50:14,674 | INFO     | intersect: 2399887.379421222
[2026-04-27 07:51:13] 2026-04-27 05:50:14,674 | INFO     | chi2: 0.24155257754842027
[2026-04-27 07:51:13] 2026-04-27 05:50:14,675 | INFO     | current memory leak: -6.78 B/s (using 311 data points, chi2=0.24)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,675 | INFO     | could have reported an average CPU frequency of 2625 MHz (15 samples)
[2026-04-27 07:51:13] 2026-04-27 05:50:14,675 | INFO     | ..............................
[2026-04-27 07:51:13] 2026-04-27 05:50:14,675 | INFO     | . Timing measurements:
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . get job = 0 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . initial setup = 5 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . payload setup = 10 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . stage-in = 0 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . payload execution = 19939 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . stage-out = 1 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | . log creation = 0 s
[2026-04-27 07:51:13] 2026-04-27 05:50:14,676 | INFO     | ..............................
[2026-04-27 07:51:13] 2026-04-27 05:50:15,021 | INFO     | 
[2026-04-27 07:51:13] 2026-04-27 05:50:15,021 | INFO     | job summary report
[2026-04-27 07:51:13] 2026-04-27 05:50:15,021 | INFO     | --------------------------------------------------
[2026-04-27 07:51:13] 2026-04-27 05:50:15,021 | INFO     | PanDA job id: 7114608942
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | task id: 49820375
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | errors: (none)
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | pilot state: finished 
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | transexitcode: 0
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | exeerrorcode: 0
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | exeerrordiag: 
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | exitcode: 0
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | exitmsg: OK
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | cpuconsumptiontime: 76906 s
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | nevents: 400
[2026-04-27 07:51:13] 2026-04-27 05:50:15,022 | INFO     | neventsw: 0
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | pid: 937429
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | pgrp: 937429
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | corecount: 4
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | event service: False
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | sizes: {0: 2274681, 1: 2276453, 11: 2276453, 19954: 2309632, 19956: 2318708, 19957: 2318846}
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | --------------------------------------------------
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | 
[2026-04-27 07:51:13] 2026-04-27 05:50:15,023 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 07:51:13] 2026-04-27 05:50:15,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 07:51:13] 2026-04-27 05:50:15,053 | INFO     | job 7114608942 has completed (purged errors)
[2026-04-27 07:51:13] 2026-04-27 05:50:15,053 | INFO     | overall cleanup function is called
[2026-04-27 07:51:13] 2026-04-27 05:50:15,265 | WARNING  | process 937429 can no longer be monitored (due to stat problems) - aborting
[2026-04-27 07:51:13] 2026-04-27 05:50:15,549 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 07:51:13] 2026-04-27 05:50:15,864 | INFO     | number of running child processes to parent process 937429: 1
[2026-04-27 07:51:13] 2026-04-27 05:50:15,864 | INFO     | maximum number of monitored processes: 6
[2026-04-27 07:51:13] 2026-04-27 05:50:15,864 | INFO     | aborting job monitoring since job object (job id=7114608942) has expired
[2026-04-27 07:51:13] 2026-04-27 05:50:16,062 | INFO     | --- collectZombieJob: --- 10, [937429]
[2026-04-27 07:51:13] 2026-04-27 05:50:16,062 | INFO     | zombie collector waiting for pid 937429
[2026-04-27 07:51:13] 2026-04-27 05:50:16,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 07:51:13] 2026-04-27 05:50:16,062 | INFO     | collected zombie processes
[2026-04-27 07:51:13] 2026-04-27 05:50:16,062 | INFO     | will attempt to kill all subprocesses of pid=937429
[2026-04-27 07:51:13] 2026-04-27 05:50:16,390 | INFO     | process IDs to be killed: [937429] (in reverse order)
[2026-04-27 07:51:13] 2026-04-27 05:50:16,515 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 07:51:13] 2026-04-27 05:50:16,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 07:51:13] 2026-04-27 05:50:16,529 | INFO     | did not find any defunct processes belonging to 937429
[2026-04-27 07:51:13] 2026-04-27 05:50:16,545 | INFO     | did not find any defunct processes belonging to 937429
[2026-04-27 07:51:13] 2026-04-27 05:50:16,546 | INFO     | Ready for new job
[2026-04-27 07:51:13] 2026-04-27 05:50:16,548 | INFO     | ***************************************
[2026-04-27 07:51:13] 2026-04-27 05:50:16,549 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 07:51:13] 2026-04-27 05:50:16,549 | INFO     | ***************************************
[2026-04-27 07:51:13] 2026-04-27 05:50:16,549 | INFO     | 
[2026-04-27 07:51:13] 2026-04-27 05:50:16,554 | INFO     | architecture information:
[2026-04-27 07:51:13] 2026-04-27 05:50:16,554 | INFO     | executing command: cat /etc/os-release
[2026-04-27 07:51:13] 2026-04-27 05:50:16,573 | INFO     | cat /etc/os-release:
[2026-04-27 07:51:13] NAME="CentOS Linux"
[2026-04-27 07:51:13] VERSION="7 (Core)"
[2026-04-27 07:51:13] ID="centos"
[2026-04-27 07:51:13] ID_LIKE="rhel fedora"
[2026-04-27 07:51:13] VERSION_ID="7"
[2026-04-27 07:51:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 07:51:13] ANSI_COLOR="0;31"
[2026-04-27 07:51:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 07:51:13] HOME_URL="https://www.centos.org/"
[2026-04-27 07:51:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 07:51:13] 
[2026-04-27 07:51:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 07:51:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 07:51:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 07:51:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 07:51:13] 
[2026-04-27 07:51:13] 2026-04-27 05:50:16,573 | INFO     | ***************************************
[2026-04-27 07:51:13] 2026-04-27 05:50:17,075 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-04-27 07:51:13] 2026-04-27 05:50:17,095 | INFO     | sufficient remaining disk space (18517852160 B)
[2026-04-27 07:51:13] 2026-04-27 05:50:17,095 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 07:51:13] 2026-04-27 05:50:17,095 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 07:51:13] 2026-04-27 05:50:17,095 | INFO     | update_server=False
[2026-04-27 07:51:13] 2026-04-27 05:50:17,095 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 07:51:13] 2026-04-27 05:50:17,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:51:13] 2026-04-27 05:50:17,096 | INFO     | aborting loop
[2026-04-27 07:51:13] 2026-04-27 05:50:17,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 07:51:13] 2026-04-27 05:50:17,800 | INFO     | all data control threads have been joined
[2026-04-27 07:51:13] 2026-04-27 05:50:17,866 | INFO     | all payload control threads have been joined
[2026-04-27 07:51:13] 2026-04-27 05:50:18,101 | INFO     | [job] retrieve thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,101 | INFO     | [job] job monitor thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,113 | INFO     | [data] copytool_in thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,230 | INFO     | [payload] validate_post thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,358 | INFO     | all job control threads have been joined
[2026-04-27 07:51:13] 2026-04-27 05:50:18,639 | INFO     | [job] validate thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,726 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,805 | INFO     | [data] control thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,871 | INFO     | [payload] control thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:18,891 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,031 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,059 | INFO     | [payload] failed_post thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,102 | INFO     | [data] copytool_out thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,139 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,363 | INFO     | [job] control thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:19,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 07:51:13] 2026-04-27 05:50:19,865 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 07:51:13] 2026-04-27 05:50:20,783 | INFO     | [job] queue monitor thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:23,870 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 07:51:13] 2026-04-27 05:50:48,042 | INFO     | PID=932499 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-27 07:51:13] 2026-04-27 05:50:48,042 | INFO     | .. there are 12 such processes running
[2026-04-27 07:51:13] 2026-04-27 05:50:48,043 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 07:51:13] 2026-04-27 05:50:48,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 07:51:13] 2026-04-27 05:50:48,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 07:51:13] 2026-04-27 05:50:59,775 | INFO     | [monitor] cgroup control has ended
[2026-04-27 07:51:13] 2026-04-27 05:51:00,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22801704265536)>', '<ExcThread(monitor, started 22801473099520)>']
[2026-04-27 07:51:13] 2026-04-27 05:51:01,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 07:51:13] 2026-04-27 05:51:01,109 | INFO     | [monitor] control thread has ended
[2026-04-27 07:51:13] 2026-04-27 05:51:05,204 | INFO     | all workflow threads have been joined
[2026-04-27 07:51:13] 2026-04-27 05:51:05,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 07:51:13] 2026-04-27 05:51:05,205 | INFO     | traces error code: 0
[2026-04-27 07:51:13] 2026-04-27 05:51:05,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 07:51:13] 2026-04-27 05:51:05,351 [wrapper] ==== pilot stdout END ====
[2026-04-27 07:51:13] 2026-04-27 05:51:05,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 07:51:13] 2026-04-27 05:51:05,356 [wrapper] pilotpid: 932499
[2026-04-27 07:51:13] 2026-04-27 05:51:05,359 [wrapper] Pilot exit status: 0
[2026-04-27 07:51:13] 2026-04-27 05:51:05,371 [wrapper] pandaids: 7114608942
[2026-04-27 07:51:13] 2026-04-27 05:51:05,452 [wrapper] cleanup supervisor_pilot 1323741 932500
[2026-04-27 07:51:13] 2026-04-27 05:51:05,455 [wrapper] Test setup, not cleaning
[2026-04-27 07:51:13] 2026-04-27 05:51:05,459 [wrapper] apfmon messages muted
[2026-04-27 07:51:13] 2026-04-27 05:51:05,462 [wrapper] ==== wrapper stdout END ====
[2026-04-27 07:51:13] 2026-04-27 05:51:05,466 [wrapper] ==== wrapper stderr END ====
[2026-04-27 07:51:13]  *** Error codes and diagnostics ***
[2026-04-27 07:51:13]     "exeErrorCode": 0,
[2026-04-27 07:51:13]     "pilotErrorCode": 0,
[2026-04-27 07:51:13]  *** Listing of results directory ***
[2026-04-27 07:51:13] total 2453388
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc     683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-27 07:51:13] -rwx------. 1 boinc boinc      36322 Apr 26 15:54 runpilot2-wrapper.sh
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc       5631 Apr 26 16:04 queuedata.json
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc        100 Apr 27 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 07:51:13] -rwxr-xr-x. 1 boinc boinc       7986 Apr 27 02:17 run_atlas
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc        105 Apr 27 02:17 job.xml
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc       6483 Apr 27 02:17 init_data.xml
[2026-04-27 07:51:13] -rw-r--r--. 2 boinc boinc 2232187498 Apr 27 02:17 EVNT.49820373._000020.pool.root.1
[2026-04-27 07:51:13] -rw-r--r--. 2 boinc boinc      15667 Apr 27 02:17 start_atlas.sh
[2026-04-27 07:51:13] drwxrwx--x. 2 boinc boinc       4096 Apr 27 02:17 shared
[2026-04-27 07:51:13] -rw-r--r--. 2 boinc boinc     697425 Apr 27 02:17 input.tar.gz
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc          0 Apr 27 02:17 boinc_lockfile
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc       2586 Apr 27 02:17 pandaJob.out
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc     997538 Apr 27 02:17 agis_schedconf.cvmfs.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc        451 Apr 27 02:17 workernode_map.json
[2026-04-27 07:51:13] drwx------. 5 boinc boinc       4096 Apr 27 02:17 pilot3
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc  271252171 Apr 27 07:49 HITS.49820375._013177.pool.root.1
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc        489 Apr 27 07:49 boinc_task_state.xml
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc       1036 Apr 27 07:50 memory_monitor_summary.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc    1509089 Apr 27 07:50 agis_ddmendpoints.agis.ALL.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc     506124 Apr 27 07:50 log.49820375._013177.job.log.tgz.1
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc       6421 Apr 27 07:50 heartbeat_new.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc       6312 Apr 27 07:50 heartbeat.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc         95 Apr 27 07:50 pilot_heartbeat.json
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc       4831 Apr 27 07:51 pilotlog.txt
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc    1842307 Apr 27 07:51 log.49820375._013177.job.log.1
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc        357 Apr 27 07:51 output.list
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc        410 Apr 27 07:51 runtime_log
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc    2365440 Apr 27 07:51 result.tar.gz
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc       8828 Apr 27 07:51 runtime_log.err
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc        666 Apr 27 07:51 192d2e7644a6.diag
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc       8192 Apr 27 07:51 boinc_mmap_file
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc         28 Apr 27 07:51 wrapper_checkpoint.txt
[2026-04-27 07:51:13] -rw-r--r--. 1 boinc boinc      21104 Apr 27 07:51 stderr.txt
[2026-04-27 07:51:13] HITS file was successfully produced:
[2026-04-27 07:51:13] -rw-------. 1 boinc boinc 271252171 Apr 27 07:49 shared/HITS.pool.root.1
[2026-04-27 07:51:13]  *** Contents of shared directory: ***
[2026-04-27 07:51:14] total 2447788
[2026-04-27 07:51:14] -rw-r--r--. 2 boinc boinc 2232187498 Apr 27 02:17 ATLAS.root_0
[2026-04-27 07:51:14] -rw-r--r--. 2 boinc boinc      15667 Apr 27 02:17 start_atlas.sh
[2026-04-27 07:51:14] -rw-r--r--. 2 boinc boinc     697425 Apr 27 02:17 input.tar.gz
[2026-04-27 07:51:14] -rw-------. 1 boinc boinc  271252171 Apr 27 07:49 HITS.pool.root.1
[2026-04-27 07:51:14] -rw-------. 1 boinc boinc    2365440 Apr 27 07:51 result.tar.gz
07:51:15 (928383): run_atlas exited; CPU time 77657.168125
07:51:15 (928383): called boinc_finish(0)

</stderr_txt>
]]>

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