Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:40:27 (3237752): wrapper (7.7.26015): starting
12:40:27 (3237752): wrapper: running run_atlas (--nthreads 4)
[2026-04-29 12:40:27] Arguments: --nthreads 4
[2026-04-29 12:40:27] Threads: 4
[2026-04-29 12:40:27] Checking for CVMFS
[2026-04-29 12:40:27] No cvmfs_config command found, will try listing directly
[2026-04-29 12:40:27] CVMFS is ok
[2026-04-29 12:40:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-29 12:40:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-29 12:40:27] Further information can be found at the LHC@home message board.
[2026-04-29 12:40:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-29 12:40:27] Checking for apptainer binary...
[2026-04-29 12:40:27] which: no apptainer in ((null))
[2026-04-29 12:40:27] apptainer is not installed, using version from CVMFS
[2026-04-29 12:40:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-29 12:40:27] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-04-29 12:40:27] apptainer works
[2026-04-29 12:40:27] Set ATHENA_PROC_NUMBER=4
[2026-04-29 12:40:27] Set ATHENA_CORE_NUMBER=4
[2026-04-29 12:40:28] Starting ATLAS job with PandaID=7114606127
[2026-04-29 12:40:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-29 16:03:18]  *** The last 200 lines of the pilot log: ***
[2026-04-29 16:03:18] 2026-04-29 14:00:32,517 | INFO     | preparing for final server update for job 7114606127 in state='finished'
[2026-04-29 16:03:18] 2026-04-29 14:00:32,780 | INFO     | number of running child processes to parent process 3247322: 1
[2026-04-29 16:03:18] 2026-04-29 14:00:32,780 | INFO     | maximum number of monitored processes: 6
[2026-04-29 16:03:18] 2026-04-29 14:00:33,190 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,190 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7114606127/jobReport.json
[2026-04-29 16:03:18] 2026-04-29 14:00:33,193 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/1/workernode_map.json
[2026-04-29 16:03:18] 2026-04-29 14:00:33,193 | INFO     | this job has now completed (state=finished)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,193 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,194 | INFO     | log transfer has been attempted: DONE
[2026-04-29 16:03:18] 2026-04-29 14:00:33,194 | INFO     | job 7114606127 has finished - writing final server update
[2026-04-29 16:03:18] 2026-04-29 14:00:33,194 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1264221/.job.ad'
[2026-04-29 16:03:18] 2026-04-29 14:00:33,194 | INFO     | total number of processed events: 400 (read)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,220 | INFO     | using path: /var/lib/boinc/var/slot80/slots/1/PanDA_Pilot-7114606127/memory_monitor_summary.json (trf name=prmon)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,221 | INFO     | extracted standard info from prmon json
[2026-04-29 16:03:18] 2026-04-29 14:00:33,221 | INFO     | extracted standard memory fields from prmon json
[2026-04-29 16:03:18] 2026-04-29 14:00:33,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-29 16:03:18] 2026-04-29 14:00:33,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-29 16:03:18] 2026-04-29 14:00:33,225 | INFO     | fitting pss+swap vs Time
[2026-04-29 16:03:18] 2026-04-29 14:00:33,226 | INFO     | sum of square deviations: 2334722845.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,227 | INFO     | sum of deviations: 12654902772.500004
[2026-04-29 16:03:18] 2026-04-29 14:00:33,227 | INFO     | mean x (centered): 0.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,228 | INFO     | mean y: 2331670.7193877553
[2026-04-29 16:03:18] 2026-04-29 14:00:33,228 | INFO     | intersect: 2331670.7193877553
[2026-04-29 16:03:18] 2026-04-29 14:00:33,228 | INFO     | chi2: 1.3478902827864154
[2026-04-29 16:03:18] 2026-04-29 14:00:33,228 | INFO     | sum of square deviations: 2160561440.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | sum of deviations: 12385226805.000011
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | mean x (centered): 0.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | mean y: 2331434.5340314135
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | intersect: 2331434.5340314135
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | chi2: 1.3487255103428626
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | current chi2=1.3487255103428626 (change=-0.061965544756398316 %)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,230 | INFO     | right removable region: 190
[2026-04-29 16:03:18] 2026-04-29 14:00:33,231 | INFO     | sum of square deviations: 2160561440.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,232 | INFO     | sum of deviations: -11611523606.000006
[2026-04-29 16:03:18] 2026-04-29 14:00:33,233 | INFO     | mean x (centered): 0.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,233 | INFO     | mean y: 2352617.8115183245
[2026-04-29 16:03:18] 2026-04-29 14:00:33,233 | INFO     | intersect: 2352617.8115183245
[2026-04-29 16:03:18] 2026-04-29 14:00:33,233 | INFO     | chi2: 0.020820395683431584
[2026-04-29 16:03:18] 2026-04-29 14:00:33,233 | INFO     | current chi2=0.020820395683431584 (change=98.45533453654768 %)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,234 | INFO     | sum of square deviations: 1995283922.5
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | sum of deviations: -11779213703.999996
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | mean x (centered): 0.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | mean y: 2352755.505376344
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | intersect: 2352755.505376344
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | chi2: 0.017311075564465952
[2026-04-29 16:03:18] 2026-04-29 14:00:33,235 | INFO     | current chi2=0.017311075564465952 (change=16.855203773856577 %)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,236 | INFO     | left removable region: 10
[2026-04-29 16:03:18] 2026-04-29 14:00:33,236 | INFO     | sum of square deviations: 1808350185.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,237 | INFO     | sum of deviations: -11368657748.5
[2026-04-29 16:03:18] 2026-04-29 14:00:33,237 | INFO     | mean x (centered): 0.0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,237 | INFO     | mean y: 2353157.561111111
[2026-04-29 16:03:18] 2026-04-29 14:00:33,237 | INFO     | intersect: 2353157.561111111
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | chi2: 0.016801869053719474
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | current memory leak: -6.29 B/s (using 180 data points, chi2=0.02)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | could have reported an average CPU frequency of 2698 MHz (10 samples)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | ..............................
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | . Timing measurements:
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | . get job = 0 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,238 | INFO     | . initial setup = 9 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | . payload setup = 17 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | . stage-in = 0 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | . payload execution = 11954 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | . stage-out = 1 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | . log creation = 0 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,239 | INFO     | ..............................
[2026-04-29 16:03:18] 2026-04-29 14:00:33,334 | INFO     | 
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | job summary report
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | --------------------------------------------------
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | PanDA job id: 7114606127
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | task id: 49888964
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | errors: (none)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | pilot state: finished 
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | transexitcode: 0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | exeerrorcode: 0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,335 | INFO     | exeerrordiag: 
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | exitcode: 0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | exitmsg: OK
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | cpuconsumptiontime: 45760 s
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | nevents: 400
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | neventsw: 0
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | pid: 3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | pgrp: 3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | corecount: 4
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | event service: False
[2026-04-29 16:03:18] 2026-04-29 14:00:33,336 | INFO     | sizes: {0: 2280743, 1: 2282572, 11975: 2312760, 11976: 2321780, 11977: 2321864, 11978: 2322058}
[2026-04-29 16:03:18] 2026-04-29 14:00:33,337 | INFO     | --------------------------------------------------
[2026-04-29 16:03:18] 2026-04-29 14:00:33,337 | INFO     | 
[2026-04-29 16:03:18] 2026-04-29 14:00:33,337 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/1
[2026-04-29 16:03:18] 2026-04-29 14:00:33,378 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,378 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,380 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-29 16:03:18] 2026-04-29 14:00:33,381 | INFO     | job 7114606127 has completed (purged errors)
[2026-04-29 16:03:18] 2026-04-29 14:00:33,381 | INFO     | overall cleanup function is called
[2026-04-29 16:03:18] 2026-04-29 14:00:34,390 | INFO     | --- collectZombieJob: --- 10, [3247322]
[2026-04-29 16:03:18] 2026-04-29 14:00:34,390 | INFO     | zombie collector waiting for pid 3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:34,390 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-29 16:03:18] 2026-04-29 14:00:34,390 | INFO     | collected zombie processes
[2026-04-29 16:03:18] 2026-04-29 14:00:34,390 | INFO     | will attempt to kill all subprocesses of pid=3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:35,120 | INFO     | process IDs to be killed: [3247322] (in reverse order)
[2026-04-29 16:03:18] 2026-04-29 14:00:35,475 | WARNING  | found no corresponding commands to process id(s)
[2026-04-29 16:03:18] 2026-04-29 14:00:35,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-29 16:03:18] 2026-04-29 14:00:35,507 | INFO     | did not find any defunct processes belonging to 3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:35,535 | INFO     | did not find any defunct processes belonging to 3247322
[2026-04-29 16:03:18] 2026-04-29 14:00:35,535 | INFO     | Ready for new job
[2026-04-29 16:03:18] 2026-04-29 14:00:35,537 | INFO     | ***************************************
[2026-04-29 16:03:18] 2026-04-29 14:00:35,538 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-29 16:03:18] 2026-04-29 14:00:35,538 | INFO     | ***************************************
[2026-04-29 16:03:18] 2026-04-29 14:00:35,538 | INFO     | 
[2026-04-29 16:03:18] 2026-04-29 14:00:35,546 | INFO     | architecture information:
[2026-04-29 16:03:18] 2026-04-29 14:00:35,546 | INFO     | executing command: cat /etc/os-release
[2026-04-29 16:03:18] 2026-04-29 14:00:35,576 | INFO     | cat /etc/os-release:
[2026-04-29 16:03:18] NAME="CentOS Linux"
[2026-04-29 16:03:18] VERSION="7 (Core)"
[2026-04-29 16:03:18] ID="centos"
[2026-04-29 16:03:18] ID_LIKE="rhel fedora"
[2026-04-29 16:03:18] VERSION_ID="7"
[2026-04-29 16:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-29 16:03:18] ANSI_COLOR="0;31"
[2026-04-29 16:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-29 16:03:18] HOME_URL="https://www.centos.org/"
[2026-04-29 16:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-29 16:03:18] 
[2026-04-29 16:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-29 16:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-29 16:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-29 16:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-29 16:03:18] 
[2026-04-29 16:03:18] 2026-04-29 14:00:35,577 | INFO     | ***************************************
[2026-04-29 16:03:18] 2026-04-29 14:00:36,079 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/1
[2026-04-29 16:03:18] 2026-04-29 14:00:36,112 | INFO     | sufficient remaining disk space (44880101376 B)
[2026-04-29 16:03:18] 2026-04-29 14:00:36,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-29 16:03:18] 2026-04-29 14:00:36,113 | INFO     | current server update state: UPDATING_FINAL
[2026-04-29 16:03:18] 2026-04-29 14:00:36,113 | INFO     | update_server=False
[2026-04-29 16:03:18] 2026-04-29 14:00:36,113 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-29 16:03:18] 2026-04-29 14:00:36,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-29 16:03:18] 2026-04-29 14:00:36,288 | INFO     | aborting loop
[2026-04-29 16:03:18] 2026-04-29 14:00:36,669 | INFO     | all payload control threads have been joined
[2026-04-29 16:03:18] 2026-04-29 14:00:36,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-29 16:03:18] 2026-04-29 14:00:36,979 | INFO     | all data control threads have been joined
[2026-04-29 16:03:18] 2026-04-29 14:00:37,118 | INFO     | [job] retrieve thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,157 | INFO     | [payload] execute_payloads thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,293 | INFO     | [job] job monitor thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,394 | INFO     | all job control threads have been joined
[2026-04-29 16:03:18] 2026-04-29 14:00:37,662 | INFO     | [payload] validate_post thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,674 | INFO     | [payload] control thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,813 | INFO     | [job] validate thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:37,984 | INFO     | [data] control thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,116 | INFO     | [payload] validate_pre thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,145 | INFO     | [payload] failed_post thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,238 | INFO     | [job] create_data_payload thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-29 16:03:18] 2026-04-29 14:00:38,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-29 16:03:18] 2026-04-29 14:00:38,399 | INFO     | [job] control thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,471 | INFO     | [data] copytool_in thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:38,926 | INFO     | [data] copytool_out thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:39,349 | INFO     | [job] queue monitor thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:42,367 | INFO     | [data] queue_monitor thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:00:46,584 | INFO     | job.realtimelogging is not enabled
[2026-04-29 16:03:18] 2026-04-29 14:00:47,589 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-29 16:03:18] 2026-04-29 14:01:07,242 | INFO     | PID=3241997 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-29 16:03:18] 2026-04-29 14:01:07,243 | INFO     | .. there are 23 such processes running
[2026-04-29 16:03:18] 2026-04-29 14:01:07,245 | INFO     | found 0 job(s) in 20 queues
[2026-04-29 16:03:18] 2026-04-29 14:01:07,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-29 16:03:18] 2026-04-29 14:01:07,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-29 16:03:18] 2026-04-29 14:01:13,501 | INFO     | [monitor] cgroup control has ended
[2026-04-29 16:03:18] 2026-04-29 14:01:15,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23430620034880)>', '<ExcThread(monitor, started 23430319564544)>']
[2026-04-29 16:03:18] 2026-04-29 14:01:16,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-29 16:03:18] 2026-04-29 14:01:16,291 | INFO     | [monitor] control thread has ended
[2026-04-29 16:03:18] 2026-04-29 14:01:20,535 | INFO     | all workflow threads have been joined
[2026-04-29 16:03:18] 2026-04-29 14:01:20,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-29 16:03:18] 2026-04-29 14:01:20,535 | INFO     | traces error code: 0
[2026-04-29 16:03:18] 2026-04-29 14:01:20,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-29 16:03:18] 2026-04-29 14:01:20,767 [wrapper] ==== pilot stdout END ====
[2026-04-29 16:03:18] 2026-04-29 14:01:20,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-29 16:03:18] 2026-04-29 14:01:20,776 [wrapper] pilotpid: 3241997
[2026-04-29 16:03:18] 2026-04-29 14:01:20,780 [wrapper] Pilot exit status: 0
[2026-04-29 16:03:18] 2026-04-29 14:01:20,795 [wrapper] pandaids: 7114606127
[2026-04-29 16:03:18] 2026-04-29 14:01:21,014 [wrapper] cleanup supervisor_pilot 3694831 3241998
[2026-04-29 16:03:18] 2026-04-29 14:01:21,018 [wrapper] Test setup, not cleaning
[2026-04-29 16:03:18] 2026-04-29 14:01:21,022 [wrapper] apfmon messages muted
[2026-04-29 16:03:18] 2026-04-29 14:01:21,026 [wrapper] ==== wrapper stdout END ====
[2026-04-29 16:03:18] 2026-04-29 14:01:21,036 [wrapper] ==== wrapper stderr END ====
[2026-04-29 16:03:18]  *** Error codes and diagnostics ***
[2026-04-29 16:03:18]     "exeErrorCode": 0,
[2026-04-29 16:03:18]     "pilotErrorCode": 0,
[2026-04-29 16:03:18]  *** Listing of results directory ***
[2026-04-29 16:03:18] total 572004
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-29 16:03:18] -rwx------. 1 boinc boinc     36322 Apr 26 15:54 runpilot2-wrapper.sh
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc      5631 Apr 26 16:04 queuedata.json
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc       100 Apr 29 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-29 16:03:18] -rwxr-xr-x. 1 boinc boinc      7986 Apr 29 12:40 run_atlas
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc       105 Apr 29 12:40 job.xml
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc      6539 Apr 29 12:40 init_data.xml
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc 414983973 Apr 29 12:40 EVNT.49888962._000001.pool.root.1
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc     15667 Apr 29 12:40 start_atlas.sh
[2026-04-29 16:03:18] drwxrwx--x. 2 boinc boinc      4096 Apr 29 12:40 shared
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc    697405 Apr 29 12:40 input.tar.gz
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc         0 Apr 29 12:40 boinc_lockfile
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc      2595 Apr 29 12:40 pandaJob.out
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc   1001891 Apr 29 12:40 agis_schedconf.cvmfs.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc       443 Apr 29 12:40 workernode_map.json
[2026-04-29 16:03:18] drwx------. 5 boinc boinc      4096 Apr 29 12:40 pilot3
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc 163734936 Apr 29 15:59 HITS.49888964._000022.pool.root.1
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc       488 Apr 29 16:00 boinc_task_state.xml
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc      1027 Apr 29 16:00 memory_monitor_summary.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc   1512704 Apr 29 16:00 agis_ddmendpoints.agis.ALL.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc    324244 Apr 29 16:00 log.49888964._000022.job.log.tgz.1
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc      6362 Apr 29 16:00 heartbeat_new.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc      6253 Apr 29 16:00 heartbeat.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc        95 Apr 29 16:01 pilot_heartbeat.json
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc      4905 Apr 29 16:01 pilotlog.txt
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc   1110581 Apr 29 16:01 log.49888964._000022.job.log.1
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc       357 Apr 29 16:01 output.list
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc       410 Apr 29 16:01 runtime_log
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc   1454080 Apr 29 16:01 result.tar.gz
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc      8828 Apr 29 16:01 runtime_log.err
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc       666 Apr 29 16:01 191e92ed9c80.diag
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc        27 Apr 29 16:03 wrapper_checkpoint.txt
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc      8192 Apr 29 16:03 boinc_mmap_file
[2026-04-29 16:03:18] -rw-r--r--. 1 boinc boinc     16414 Apr 29 16:03 stderr.txt
[2026-04-29 16:03:18] HITS file was successfully produced:
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc 163734936 Apr 29 15:59 shared/HITS.pool.root.1
[2026-04-29 16:03:18]  *** Contents of shared directory: ***
[2026-04-29 16:03:18] total 567288
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc 414983973 Apr 29 12:40 ATLAS.root_0
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc     15667 Apr 29 12:40 start_atlas.sh
[2026-04-29 16:03:18] -rw-r--r--. 2 boinc boinc    697405 Apr 29 12:40 input.tar.gz
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc 163734936 Apr 29 15:59 HITS.pool.root.1
[2026-04-29 16:03:18] -rw-------. 1 boinc boinc   1454080 Apr 29 16:01 result.tar.gz
16:03:19 (3237752): run_atlas exited; CPU time 46478.938845
16:03:19 (3237752): called boinc_finish(0)

</stderr_txt>
]]>

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