Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 07:03:56 (7472): vboxwrapper version 26210
2026-04-28 07:03:56 (7472): BOINC client version: 8.2.9
2026-04-28 07:03:57 (7472): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2026-04-28 07:03:58 (7472): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 07:03:58 (7472): Create VM. (boinc_aa811ea7111029f6, slot#0)
2026-04-28 07:03:59 (7472): Setting Memory Size for VM. (4400MB)
2026-04-28 07:03:59 (7472): Setting CPU Count for VM. (4)
2026-04-28 07:03:59 (7472): Setting Chipset Options for VM.
2026-04-28 07:03:59 (7472): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 07:04:00 (7472): Setting Boot Options for VM.
2026-04-28 07:04:00 (7472): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 07:04:01 (7472): Enabling VM Network Access.
2026-04-28 07:04:01 (7472): Disabling USB Support for VM.
2026-04-28 07:04:01 (7472): Disabling COM Port Support for VM.
2026-04-28 07:04:02 (7472): Disabling LPT Port Support for VM.
2026-04-28 07:04:02 (7472): Disabling Audio Support for VM.
2026-04-28 07:04:02 (7472): Disabling Clipboard Support for VM.
2026-04-28 07:04:02 (7472): Disabling Drag and Drop Support for VM.
2026-04-28 07:04:03 (7472): Adding storage controller(s) to VM.
2026-04-28 07:04:03 (7472): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 07:04:05 (7472): Adding VirtualBox Guest Additions to VM.
2026-04-28 07:04:05 (7472): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 07:04:06 (7472): forwarding host port 50693 to guest port 80
2026-04-28 07:04:06 (7472): Enabling remote desktop for VM.
2026-04-28 07:04:07 (7472): Enabling shared directory for VM.
2026-04-28 07:04:08 (7472): Starting VM using VBoxManage interface. (boinc_aa811ea7111029f6, slot#0)
2026-04-28 07:04:17 (7472): Successfully started VM. (PID = '18080')
2026-04-28 07:04:17 (7472): Reporting VM Process ID to BOINC.
2026-04-28 07:04:17 (7472): Guest Log: BIOS: VirtualBox 7.2.0
2026-04-28 07:04:17 (7472): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 07:04:17 (7472): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 07:04:17 (7472): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 07:04:17 (7472): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 07:04:17 (7472): Detected: Web Application Enabled (http://localhost:50693)
2026-04-28 07:04:17 (7472): Detected: Remote Desktop Enabled (localhost:50694)
2026-04-28 07:04:17 (7472): Preference change detected
2026-04-28 07:04:17 (7472): Setting CPU throttle for VM. (100%)
2026-04-28 07:04:17 (7472): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 07:04:19 (7472): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 07:04:19 (7472): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 07:04:22 (7472): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 07:04:22 (7472): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 07:04:22 (7472): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 07:04:31 (7472): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 07:04:31 (7472): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 07:04:40 (7472): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000233 main     Log opened 2026-04-28T07:04:37.025018000Z
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000393 main     OS Product: Linux
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000441 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000478 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000515 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000516 main     Process ID: 1307
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.000517 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 07:04:40 (7472): Guest Log: 00:00:00.002835 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 07:04:40 (7472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 07:04:40 (7472): Guest Log: [INFO] Mounting shared directory
2026-04-28 07:04:40 (7472): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 07:04:50 (7472): Guest Log: 00:00:10.006495 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 012 347 117 000ns (GuestNow=1 777 377 889 377 645 000 ns GuestLast=1 777 359 877 030 528 000 ns fSetTimeLastLoop=true )
2026-04-28 07:05:27 (7472): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 07:05:27 (7472): Guest Log: [INFO] Detected branch: prod
2026-04-28 07:05:27 (7472): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 07:05:27 (7472): Guest Log: Copying input files
2026-04-28 07:05:30 (7472): Guest Log: Copied input files into RunAtlas.
2026-04-28 07:05:30 (7472): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 07:05:30 (7472): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 07:05:30 (7472): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 07:05:30 (7472): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 07:05:39 (7472): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 07:05:39 (7472): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 07:05:39 (7472): Guest Log: 2.6.3.0 1610 0 30156 158965 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 07:05:40 (7472): Guest Log: copied the webapp to /var/www
2026-04-28 07:05:40 (7472): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-28 07:05:40 (7472): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-28 07:05:41 (7472): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 07:05:41 (7472): Guest Log:  *** Starting ATLAS job. (PandaID=7114606217 taskID=49889002) ***
2026-04-28 08:44:21 (7472): Status Report: Elapsed Time: '6000.000000'
2026-04-28 08:44:21 (7472): Status Report: CPU Time: '21808.000000'
2026-04-28 10:24:26 (7472): Status Report: Elapsed Time: '12000.000000'
2026-04-28 10:24:26 (7472): Status Report: CPU Time: '45682.125000'
2026-04-28 11:50:48 (7472): Guest Log:  *** Job finished ***
2026-04-28 11:50:48 (7472): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:34,367 | INFO     | all workflow threads have been joined
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:34,368 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:34,369 | INFO     | traces error code: 0
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:34,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,008 | INFO     | PID=6012 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,009 | INFO     | found 0 job(s) in 20 queues
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,010 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,010 | INFO     | [monitor] control thread has ended
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,117 [wrapper] ==== pilot stdout END ====
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,124 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,130 [wrapper] pilotpid: 6012
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,136 [wrapper] Pilot exit status: 0
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,313 [wrapper] pandaids: 7114606217
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,422 [wrapper] cleanup supervisor_pilot 29560 6013
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,432 [wrapper] Test setup, not cleaning
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,444 [wrapper] apfmon messages muted
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,456 [wrapper] ==== wrapper stdout END ====
2026-04-28 11:50:48 (7472): Guest Log: 2026-04-28 16:50:47,467 [wrapper] ==== wrapper stderr END ====
2026-04-28 11:50:48 (7472): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 11:50:48 (7472): Guest Log:     "exeErrorCode": 0,
2026-04-28 11:50:48 (7472): Guest Log:     "pilotErrorCode": 0,
2026-04-28 11:50:48 (7472): Guest Log:  *** Listing of results directory ***
2026-04-28 11:50:48 (7472): Guest Log: total 160220
2026-04-28 11:50:48 (7472): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 26 13:53 pilot3.tar.gz
2026-04-28 11:50:48 (7472): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 26 13:54 runpilot2-wrapper.sh
2026-04-28 11:50:48 (7472): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 26 14:04 queuedata.json
2026-04-28 11:50:48 (7472): Guest Log: -rwxr-xr-x. 1 atlas atlas      8548 Apr 28 12:05 init_data.xml
2026-04-28 11:50:48 (7472): Guest Log: -rwxr-xr-x. 1 atlas atlas    697412 Apr 28 12:05 input.tar.gz
2026-04-28 11:50:48 (7472): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 12:05 start_atlas.sh
2026-04-28 11:50:48 (7472): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 12:05 EVNT.49888999._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 11:50:48 (7472): Guest Log: -rw-r--r--. 1 atlas atlas      2589 Apr 28 12:05 pandaJob.out
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas    993621 Apr 28 12:06 agis_schedconf.cvmfs.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas       426 Apr 28 12:07 workernode_map.json
2026-04-28 11:50:48 (7472): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 12:07 pilot3
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas 156172183 Apr 28 16:49 HITS.49889002._000034.pool.root.1
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 28 16:50 memory_monitor_summary.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 16:50 agis_ddmendpoints.agis.ALL.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas    381661 Apr 28 16:50 log.49889002._000034.job.log.tgz.1
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas      6376 Apr 28 16:50 heartbeat_new.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas      6267 Apr 28 16:50 heartbeat.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 16:50 pilot_heartbeat.json
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas       744 Apr 28 16:50 pilotlog.txt
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas   1532468 Apr 28 16:50 log.49889002._000034.job.log.1
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 16:50 output.list
2026-04-28 11:50:48 (7472): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 16:50 runtime_log
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas   1935360 Apr 28 16:50 result.tar.gz
2026-04-28 11:50:48 (7472): Guest Log: -rw-r--r--. 1 atlas atlas      8402 Apr 28 16:50 runtime_log.err
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas       667 Apr 28 16:50 192d824afcf8.diag
2026-04-28 11:50:48 (7472): Guest Log: Looking for outputfile HITS.49889002._000034.pool.root.1
2026-04-28 11:50:48 (7472): Guest Log: HITS file was successfully produced
2026-04-28 11:50:48 (7472): Guest Log: -rw-------. 1 atlas atlas 156172183 Apr 28 16:49 /home/atlas/RunAtlas/HITS.49889002._000034.pool.root.1
2026-04-28 11:50:49 (7472): Guest Log: Successfully finished the ATLAS job!
2026-04-28 11:50:49 (7472): Guest Log: Copying the results back to the shared directory!
2026-04-28 11:50:49 (7472): Guest Log:  *** Contents of shared directory: ***
2026-04-28 11:50:49 (7472): Guest Log: total 549124
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root 403460421 Apr 28 12:03 ATLAS.root_0
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root 156172183 Apr 28 16:50 HITS.pool.root.1
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root      8548 Apr 28 12:03 init_data.xml
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root    697412 Apr 26 16:19 input.tar.gz
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root   1935360 Apr 28 16:50 result.tar.gz
2026-04-28 11:50:49 (7472): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 26 16:19 start_atlas.sh
2026-04-28 11:50:49 (7472): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 11:50:50 (7472): VM Completion File Detected.
2026-04-28 11:50:50 (7472): Powering off VM.
2026-04-28 11:50:51 (7472): Successfully stopped VM.
2026-04-28 11:50:51 (7472): Deregistering VM. (boinc_aa811ea7111029f6, slot#0)
2026-04-28 11:50:52 (7472): Removing network bandwidth throttle group from VM.
2026-04-28 11:50:52 (7472): Removing VM from VirtualBox.
2026-04-28 11:50:57 (7472): called boinc_finish(0)

</stderr_txt>
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