Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:48 (12611): wrapper (7.7.26015): starting
18:06:48 (12611): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 18:06:48] Arguments: --nthreads 8
[2026-04-26 18:06:48] Threads: 8
[2026-04-26 18:06:48] Checking for CVMFS
[2026-04-26 18:06:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 18:06:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 18:06:53] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 18:06:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 18:06:55] 2.11.2.0 6489 15782 99792 158893 2 11 23396939 25165825 96 130560 0 6061287 99.945 1623147 5842 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 18:06:55] CVMFS is ok
[2026-04-26 18:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 18:06:55] Checking for apptainer binary...
[2026-04-26 18:06:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 18:06:55] Running /usr/bin/apptainer --version
[2026-04-26 18:06:55] apptainer version 1.3.2-1.el7
[2026-04-26 18:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 18:07:19] cg-vwn368.simple-grid.lan
[2026-04-26 18:07:19] apptainer works
[2026-04-26 18:07:19] Set ATHENA_PROC_NUMBER=8
[2026-04-26 18:07:19] Set ATHENA_CORE_NUMBER=8
[2026-04-26 18:07:19] Starting ATLAS job with PandaID=7114606371
[2026-04-26 18:07:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 23:11:57]  *** The last 200 lines of the pilot log: ***
[2026-04-26 23:11:57] 2026-04-26 21:10:44,718 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,718 | INFO     | log transfer has been attempted: DONE
[2026-04-26 23:11:57] 2026-04-26 21:10:44,718 | INFO     | job 7114606371 has finished - writing final server update
[2026-04-26 23:11:57] 2026-04-26 21:10:44,719 | INFO     | total number of processed events: 400 (read)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,721 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7114606371/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,721 | INFO     | extracted standard info from prmon json
[2026-04-26 23:11:57] 2026-04-26 21:10:44,721 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 23:11:57] 2026-04-26 21:10:44,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 23:11:57] 2026-04-26 21:10:44,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 23:11:57] 2026-04-26 21:10:44,728 | INFO     | fitting pss+swap vs Time
[2026-04-26 23:11:57] 2026-04-26 21:10:44,728 | INFO     | sum of square deviations: 7253894147.5
[2026-04-26 23:11:57] 2026-04-26 21:10:44,731 | INFO     | sum of deviations: 183425459383.99994
[2026-04-26 23:11:57] 2026-04-26 21:10:44,731 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,731 | INFO     | mean y: 2409913.321678322
[2026-04-26 23:11:57] 2026-04-26 21:10:44,732 | INFO     | intersect: 2409913.321678322
[2026-04-26 23:11:57] 2026-04-26 21:10:44,732 | INFO     | chi2: 8.969443729922057
[2026-04-26 23:11:57] 2026-04-26 21:10:44,733 | INFO     | sum of square deviations: 6880054580.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,735 | INFO     | sum of deviations: 198820541783.99997
[2026-04-26 23:11:57] 2026-04-26 21:10:44,739 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,739 | INFO     | mean y: 2416083.512455516
[2026-04-26 23:11:57] 2026-04-26 21:10:44,739 | INFO     | intersect: 2416083.512455516
[2026-04-26 23:11:57] 2026-04-26 21:10:44,740 | INFO     | chi2: 8.256126646329875
[2026-04-26 23:11:57] 2026-04-26 21:10:44,740 | INFO     | current chi2=8.256126646329875 (change=7.952746068438524 %)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,740 | INFO     | right removable region: 280
[2026-04-26 23:11:57] 2026-04-26 21:10:44,740 | INFO     | sum of square deviations: 6880054580.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,746 | INFO     | sum of deviations: 81124798712.99998
[2026-04-26 23:11:57] 2026-04-26 21:10:44,747 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,747 | INFO     | mean y: 2451634.893238434
[2026-04-26 23:11:57] 2026-04-26 21:10:44,747 | INFO     | intersect: 2451634.893238434
[2026-04-26 23:11:57] 2026-04-26 21:10:44,747 | INFO     | chi2: 3.6492932235905498
[2026-04-26 23:11:57] 2026-04-26 21:10:44,747 | INFO     | current chi2=3.6492932235905498 (change=59.31416335868733 %)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,748 | INFO     | sum of square deviations: 6519285025.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,751 | INFO     | sum of deviations: 4612581886.499996
[2026-04-26 23:11:57] 2026-04-26 21:10:44,751 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,751 | INFO     | mean y: 2483939.7137681157
[2026-04-26 23:11:57] 2026-04-26 21:10:44,751 | INFO     | intersect: 2483939.7137681157
[2026-04-26 23:11:57] 2026-04-26 21:10:44,752 | INFO     | chi2: 0.8897148563413623
[2026-04-26 23:11:57] 2026-04-26 21:10:44,752 | INFO     | current chi2=0.8897148563413623 (change=75.61952954095672 %)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,752 | INFO     | sum of square deviations: 6171352920.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,755 | INFO     | sum of deviations: -6300283984.000002
[2026-04-26 23:11:57] 2026-04-26 21:10:44,755 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,755 | INFO     | mean y: 2488691.3653136534
[2026-04-26 23:11:57] 2026-04-26 21:10:44,756 | INFO     | intersect: 2488691.3653136534
[2026-04-26 23:11:57] 2026-04-26 21:10:44,756 | INFO     | chi2: 0.815383859217152
[2026-04-26 23:11:57] 2026-04-26 21:10:44,756 | INFO     | current chi2=0.815383859217152 (change=8.354474087335156 %)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,756 | INFO     | left removable region: 15
[2026-04-26 23:11:57] 2026-04-26 21:10:44,757 | INFO     | sum of square deviations: 5770452380.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,759 | INFO     | sum of deviations: 11471107889.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,759 | INFO     | mean x (centered): 0.0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,760 | INFO     | mean y: 2496650.2113207546
[2026-04-26 23:11:57] 2026-04-26 21:10:44,760 | INFO     | intersect: 2496650.2113207546
[2026-04-26 23:11:57] 2026-04-26 21:10:44,760 | INFO     | chi2: 0.021703570718081766
[2026-04-26 23:11:57] 2026-04-26 21:10:44,760 | INFO     | current memory leak: 1.99 B/s (using 265 data points, chi2=0.02)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,761 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,761 | INFO     | ..............................
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . Timing measurements:
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . get job = 0 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . initial setup = 114 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . payload setup = 257 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . stage-in = 0 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . payload execution = 17565 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . stage-out = 3 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | . log creation = 1 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,762 | INFO     | ..............................
[2026-04-26 23:11:57] 2026-04-26 21:10:44,894 | INFO     | 
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | job summary report
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | --------------------------------------------------
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | PanDA job id: 7114606371
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | task id: 49888985
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | errors: (none)
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 23:11:57] 2026-04-26 21:10:44,895 | INFO     | pilot state: finished 
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | transexitcode: 0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | exeerrorcode: 0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | exeerrordiag: 
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | exitcode: 0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | exitmsg: OK
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | cpuconsumptiontime: 65862 s
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | nevents: 400
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | neventsw: 0
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | pid: 21129
[2026-04-26 23:11:57] 2026-04-26 21:10:44,896 | INFO     | pgrp: 21129
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | corecount: 8
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | event service: False
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | sizes: {0: 2274021, 1: 2274933, 2: 2276535, 13: 2276535, 17827: 2308742, 17832: 2317740, 17833: 2317924, 17836: 2318118}
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | --------------------------------------------------
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | 
[2026-04-26 23:11:57] 2026-04-26 21:10:44,897 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-26 23:11:57] 2026-04-26 21:10:45,370 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,372 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,373 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 23:11:57] 2026-04-26 21:10:45,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,373 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 23:11:57] 2026-04-26 21:10:45,373 | INFO     | job 7114606371 has completed (purged errors)
[2026-04-26 23:11:57] 2026-04-26 21:10:45,373 | INFO     | overall cleanup function is called
[2026-04-26 23:11:57] 2026-04-26 21:10:46,381 | INFO     | --- collectZombieJob: --- 10, [21129]
[2026-04-26 23:11:57] 2026-04-26 21:10:46,381 | INFO     | zombie collector waiting for pid 21129
[2026-04-26 23:11:57] 2026-04-26 21:10:46,381 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 23:11:57] 2026-04-26 21:10:46,381 | INFO     | collected zombie processes
[2026-04-26 23:11:57] 2026-04-26 21:10:46,381 | INFO     | will attempt to kill all subprocesses of pid=21129
[2026-04-26 23:11:57] 2026-04-26 21:10:46,453 | INFO     | process IDs to be killed: [21129] (in reverse order)
[2026-04-26 23:11:57] 2026-04-26 21:10:47,136 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 23:11:57] 2026-04-26 21:10:47,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 23:11:57] 2026-04-26 21:10:47,138 | INFO     | did not find any defunct processes belonging to 21129
[2026-04-26 23:11:57] 2026-04-26 21:10:47,140 | INFO     | did not find any defunct processes belonging to 21129
[2026-04-26 23:11:57] 2026-04-26 21:10:47,140 | INFO     | Ready for new job
[2026-04-26 23:11:57] 2026-04-26 21:10:47,142 | INFO     | ***************************************
[2026-04-26 23:11:57] 2026-04-26 21:10:47,142 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 23:11:57] 2026-04-26 21:10:47,142 | INFO     | ***************************************
[2026-04-26 23:11:57] 2026-04-26 21:10:47,142 | INFO     | 
[2026-04-26 23:11:57] 2026-04-26 21:10:47,143 | INFO     | pilot is running in a VM
[2026-04-26 23:11:57] 2026-04-26 21:10:47,143 | INFO     | architecture information:
[2026-04-26 23:11:57] 2026-04-26 21:10:47,145 | INFO     | executing command: cat /etc/os-release
[2026-04-26 23:11:57] 2026-04-26 21:10:47,214 | INFO     | cat /etc/os-release:
[2026-04-26 23:11:57] NAME="CentOS Linux"
[2026-04-26 23:11:57] VERSION="7 (Core)"
[2026-04-26 23:11:57] ID="centos"
[2026-04-26 23:11:57] ID_LIKE="rhel fedora"
[2026-04-26 23:11:57] VERSION_ID="7"
[2026-04-26 23:11:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 23:11:57] ANSI_COLOR="0;31"
[2026-04-26 23:11:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 23:11:57] HOME_URL="https://www.centos.org/"
[2026-04-26 23:11:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 23:11:57] 
[2026-04-26 23:11:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 23:11:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 23:11:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 23:11:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 23:11:57] 
[2026-04-26 23:11:57] 2026-04-26 21:10:47,214 | INFO     | ***************************************
[2026-04-26 23:11:57] 2026-04-26 21:10:47,718 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-26 23:11:57] 2026-04-26 21:10:47,877 | INFO     | sufficient remaining disk space (496209231872 B)
[2026-04-26 23:11:57] 2026-04-26 21:10:47,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 23:11:57] 2026-04-26 21:10:47,878 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 23:11:57] 2026-04-26 21:10:47,878 | INFO     | update_server=False
[2026-04-26 23:11:57] 2026-04-26 21:10:47,878 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 23:11:57] 2026-04-26 21:10:47,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 23:11:57] 2026-04-26 21:10:47,929 | INFO     | all data control threads have been joined
[2026-04-26 23:11:57] 2026-04-26 21:10:47,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 23:11:57] 2026-04-26 21:10:47,937 | INFO     | aborting loop
[2026-04-26 23:11:57] 2026-04-26 21:10:48,573 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 23:11:57] 2026-04-26 21:10:48,884 | INFO     | [job] retrieve thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:48,935 | INFO     | [data] control thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:48,938 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:48,944 | INFO     | [job] job monitor thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:48,960 | INFO     | [payload] failed_post thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,023 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,040 | INFO     | [payload] validate_post thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,062 | INFO     | all job control threads have been joined
[2026-04-26 23:11:57] 2026-04-26 21:10:49,309 | INFO     | all payload control threads have been joined
[2026-04-26 23:11:57] 2026-04-26 21:10:49,403 | INFO     | [data] copytool_in thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,693 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,892 | INFO     | [data] copytool_out thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:49,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 23:11:57] 2026-04-26 21:10:49,939 | INFO     | [job] validate thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:50,068 | INFO     | [job] control thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:50,184 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:50,315 | INFO     | [payload] control thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:50,914 | INFO     | [job] queue monitor thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:10:52,582 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 23:11:57] 2026-04-26 21:11:17,786 | INFO     | PID=16651 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-26 23:11:57] 2026-04-26 21:11:17,786 | INFO     | .. there are 2 such processes running
[2026-04-26 23:11:57] 2026-04-26 21:11:17,786 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 23:11:57] 2026-04-26 21:11:17,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 23:11:57] 2026-04-26 21:11:17,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 23:11:57] 2026-04-26 21:11:34,589 [wrapper] supervise_pilot (15 min periods counter: 21)
[2026-04-26 23:11:57] 2026-04-26 21:11:46,093 | INFO     | [monitor] cgroup control has ended
[2026-04-26 23:11:57] 2026-04-26 21:11:46,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374291937088)>', '<ExcThread(monitor, started 140373984782080)>']
[2026-04-26 23:11:57] 2026-04-26 21:11:46,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 23:11:57] 2026-04-26 21:11:46,960 | INFO     | [monitor] control thread has ended
[2026-04-26 23:11:57] 2026-04-26 21:11:51,754 | INFO     | all workflow threads have been joined
[2026-04-26 23:11:57] 2026-04-26 21:11:51,754 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 23:11:57] 2026-04-26 21:11:51,754 | INFO     | traces error code: 0
[2026-04-26 23:11:57] 2026-04-26 21:11:51,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 23:11:57] 2026-04-26 21:11:52,061 [wrapper] ==== pilot stdout END ====
[2026-04-26 23:11:57] 2026-04-26 21:11:52,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 23:11:57] 2026-04-26 21:11:52,195 [wrapper] pilotpid: 16651
[2026-04-26 23:11:57] 2026-04-26 21:11:52,308 [wrapper] Pilot exit status: 0
[2026-04-26 23:11:57] 2026-04-26 21:11:52,828 [wrapper] pandaids: 7114606371
[2026-04-26 23:11:57] 2026-04-26 21:11:53,957 [wrapper] cleanup supervisor_pilot 28790 16652
[2026-04-26 23:11:57] 2026-04-26 21:11:54,065 [wrapper] Test setup, not cleaning
[2026-04-26 23:11:57] 2026-04-26 21:11:54,190 [wrapper] apfmon messages muted
[2026-04-26 23:11:57] 2026-04-26 21:11:54,332 [wrapper] ==== wrapper stdout END ====
[2026-04-26 23:11:57] 2026-04-26 21:11:54,476 [wrapper] ==== wrapper stderr END ====
[2026-04-26 23:11:57]  *** Error codes and diagnostics ***
[2026-04-26 23:11:57]     "exeErrorCode": 0,
[2026-04-26 23:11:57]     "pilotErrorCode": 0,
[2026-04-26 23:11:57]  *** Listing of results directory ***
[2026-04-26 23:11:57] total 563444
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-26 23:11:57] -rwx------. 1 boinc boinc     36322 Apr 26 15:54 runpilot2-wrapper.sh
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc      5631 Apr 26 16:04 queuedata.json
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc       100 Apr 26 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 23:11:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 18:06 run_atlas
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc       105 Apr 26 18:06 job.xml
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc      6305 Apr 26 18:06 init_data.xml
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc 405958426 Apr 26 18:06 EVNT.49888983._000001.pool.root.1
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc     15667 Apr 26 18:06 start_atlas.sh
[2026-04-26 23:11:57] drwxrwx--x. 2 boinc boinc        68 Apr 26 18:06 shared
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc    697409 Apr 26 18:06 input.tar.gz
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc         0 Apr 26 18:06 boinc_lockfile
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc      2589 Apr 26 18:07 pandaJob.out
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc       415 Apr 26 18:13 workernode_map.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc    997522 Apr 26 18:13 agis_schedconf.cvmfs.json
[2026-04-26 23:11:57] drwx------. 5 boinc boinc      4096 Apr 26 18:13 pilot3
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc 162663922 Apr 26 23:09 HITS.49888985._000037.pool.root.1
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc       489 Apr 26 23:09 boinc_task_state.xml
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc        95 Apr 26 23:10 pilot_heartbeat.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc      1011 Apr 26 23:10 memory_monitor_summary.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc   1509089 Apr 26 23:10 agis_ddmendpoints.agis.ALL.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc    456308 Apr 26 23:10 log.49888985._000037.job.log.tgz.1
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc      6321 Apr 26 23:10 heartbeat_new.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc      6212 Apr 26 23:10 heartbeat.json
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc      4883 Apr 26 23:11 pilotlog.txt
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc   1660817 Apr 26 23:11 log.49888985._000037.job.log.1
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc      8192 Apr 26 23:11 boinc_mmap_file
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc        28 Apr 26 23:11 wrapper_checkpoint.txt
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc       357 Apr 26 23:11 output.list
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc       410 Apr 26 23:11 runtime_log
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc   2129920 Apr 26 23:11 result.tar.gz
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc      8439 Apr 26 23:11 runtime_log.err
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc       656 Apr 26 23:11 192df92a782c.diag
[2026-04-26 23:11:57] -rw-r--r--. 1 boinc boinc     20576 Apr 26 23:11 stderr.txt
[2026-04-26 23:11:57] HITS file was successfully produced:
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc 162663922 Apr 26 23:09 shared/HITS.pool.root.1
[2026-04-26 23:11:57]  *** Contents of shared directory: ***
[2026-04-26 23:11:57] total 558076
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc 405958426 Apr 26 18:06 ATLAS.root_0
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc     15667 Apr 26 18:06 start_atlas.sh
[2026-04-26 23:11:57] -rw-r--r--. 2 boinc boinc    697409 Apr 26 18:06 input.tar.gz
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc 162663922 Apr 26 23:09 HITS.pool.root.1
[2026-04-26 23:11:57] -rw-------. 1 boinc boinc   2129920 Apr 26 23:11 result.tar.gz
23:11:58 (12611): run_atlas exited; CPU time 66039.684721
23:11:58 (12611): called boinc_finish(0)

</stderr_txt>
]]>

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