Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:06:51 (971107): wrapper (7.7.26015): starting
19:06:51 (971107): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 19:06:51] Arguments: --nthreads 12
[2026-04-27 19:06:51] Threads: 12
[2026-04-27 19:06:51] Checking for CVMFS
[2026-04-27 19:06:51] No cvmfs_config command found, will try listing directly
[2026-04-27 19:06:51] CVMFS is ok
[2026-04-27 19:06:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 19:06:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 19:06:51] Further information can be found at the LHC@home message board.
[2026-04-27 19:06:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 19:06:51] Checking for apptainer binary...
[2026-04-27 19:06:51] which: no apptainer in ((null))
[2026-04-27 19:06:51] apptainer is not installed, using version from CVMFS
[2026-04-27 19:06:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 19:06:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-04-27 19:06:51] apptainer works
[2026-04-27 19:06:51] Set ATHENA_PROC_NUMBER=12
[2026-04-27 19:06:51] Set ATHENA_CORE_NUMBER=12
[2026-04-27 19:06:51] Starting ATLAS job with PandaID=7114609775
[2026-04-27 19:06:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 19:36:11]  *** The last 200 lines of the pilot log: ***
[2026-04-27 19:36:11]  filesize=336809
[2026-04-27 19:36:11]  filetype=log
[2026-04-27 19:36:11]  guid=56e9417b-3ec8-4e67-9c52-337dc5c6cbce
[2026-04-27 19:36:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 19:36:11]  is_altstaged=None
[2026-04-27 19:36:11]  is_tar=False
[2026-04-27 19:36:11]  lfn=log.49545114._035290.job.log.tgz.1
[2026-04-27 19:36:11]  mtime=0
[2026-04-27 19:36:11]  protocol_id=None
[2026-04-27 19:36:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 19:36:11]  replicas=None
[2026-04-27 19:36:11]  scope=mc23_13p6TeV
[2026-04-27 19:36:11]  status=None
[2026-04-27 19:36:11]  status_code=0
[2026-04-27 19:36:11]  storage_token=
[2026-04-27 19:36:11]  surl=/var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114609775/log.49545114._035290.job.log.tgz.1
[2026-04-27 19:36:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/c3/log.49545114._035290.job.log.tgz.1
[2026-04-27 19:36:11]  workdir=None
[2026-04-27 19:36:11] ]
[2026-04-27 19:36:11] 2026-04-27 17:35:08,152 | INFO     | transferring file log.49545114._035290.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114609775/log.49545114._035290.job.log.tgz.1 to /var/lib/
[2026-04-27 19:36:11] 2026-04-27 17:35:08,152 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114609775/log.49545114._035290.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/1/
[2026-04-27 19:36:11] 2026-04-27 17:35:08,168 | INFO     | adding to output.list: log.49545114._035290.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d8/c3/log.49545114._035290.job.log.tg
[2026-04-27 19:36:11] 2026-04-27 17:35:08,169 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 19:36:11] 2026-04-27 17:35:08,169 | INFO     | summary of transferred files:
[2026-04-27 19:36:11] 2026-04-27 17:35:08,169 | INFO     |  -- lfn=log.49545114._035290.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 19:36:11] 2026-04-27 17:35:08,169 | INFO     | stage-out finished correctly
[2026-04-27 19:36:11] 2026-04-27 17:35:09,523 | INFO     | monitor loop #130: job 0:7114609775 is in state 'finished'
[2026-04-27 19:36:11] 2026-04-27 17:35:09,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 19:36:11] 2026-04-27 17:35:10,264 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 19:36:11] 2026-04-27 17:35:12,026 | INFO     | monitor loop #131: job 0:7114609775 is in state 'finished'
[2026-04-27 19:36:11] 2026-04-27 17:35:12,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,586 | INFO     | job 7114609775 has state=finished
[2026-04-27 19:36:11] 2026-04-27 17:35:12,586 | INFO     | preparing for final server update for job 7114609775 in state='finished'
[2026-04-27 19:36:11] 2026-04-27 17:35:12,586 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114609775/jobReport.json
[2026-04-27 19:36:11] 2026-04-27 17:35:12,588 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/1/workernode_map.json
[2026-04-27 19:36:11] 2026-04-27 17:35:12,588 | INFO     | this job has now completed (state=finished)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,588 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,588 | INFO     | log transfer has been attempted: DONE
[2026-04-27 19:36:11] 2026-04-27 17:35:12,588 | INFO     | job 7114609775 has finished - writing final server update
[2026-04-27 19:36:11] 2026-04-27 17:35:12,589 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2235930/.job.ad'
[2026-04-27 19:36:11] 2026-04-27 17:35:12,589 | INFO     | total number of processed events: 400 (read)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,606 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114609775/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,606 | INFO     | extracted standard info from prmon json
[2026-04-27 19:36:11] 2026-04-27 17:35:12,606 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 19:36:11] 2026-04-27 17:35:12,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 19:36:11] 2026-04-27 17:35:12,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | fitting pss+swap vs Time
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | sum of square deviations: 2865170.0
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | sum of deviations: 35759725.0
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | mean x (centered): 0.0
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | mean y: 2715308.8095238097
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | intersect: 2715308.8095238097
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | chi2: 5.6178545980389476e-05
[2026-04-27 19:36:11] 2026-04-27 17:35:12,607 | INFO     | current memory leak: 12.48 B/s (using 21 data points, chi2=0.00)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | could have reported an average CPU frequency of 3618 MHz (4 samples)
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | ..............................
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . Timing measurements:
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . get job = 0 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . initial setup = 4 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . payload setup = 6 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . stage-in = 0 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . payload execution = 1663 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . stage-out = 0 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | . log creation = 0 s
[2026-04-27 19:36:11] 2026-04-27 17:35:12,608 | INFO     | ..............................
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | 
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | job summary report
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | --------------------------------------------------
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | PanDA job id: 7114609775
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | task id: 49545114
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | errors: (none)
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | pilot state: finished 
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | transexitcode: 0
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | exeerrorcode: 0
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | exeerrordiag: 
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | exitcode: 0
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | exitmsg: OK
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | cpuconsumptiontime: 17628 s
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | nevents: 400
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | neventsw: 0
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | pid: 981472
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | pgrp: 981472
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | corecount: 12
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | event service: False
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | sizes: {0: 2280765, 1: 2282594, 11: 2282594, 1673: 2307439, 1674: 2316461, 1676: 2316517, 1678: 2316839}
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | --------------------------------------------------
[2026-04-27 19:36:11] 2026-04-27 17:35:13,055 | INFO     | 
[2026-04-27 19:36:11] 2026-04-27 17:35:13,056 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/1
[2026-04-27 19:36:11] 2026-04-27 17:35:13,068 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | job 7114609775 has completed (purged errors)
[2026-04-27 19:36:11] 2026-04-27 17:35:13,069 | INFO     | overall cleanup function is called
[2026-04-27 19:36:11] 2026-04-27 17:35:14,077 | INFO     | --- collectZombieJob: --- 10, [981472]
[2026-04-27 19:36:11] 2026-04-27 17:35:14,077 | INFO     | zombie collector waiting for pid 981472
[2026-04-27 19:36:11] 2026-04-27 17:35:14,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 19:36:11] 2026-04-27 17:35:14,077 | INFO     | collected zombie processes
[2026-04-27 19:36:11] 2026-04-27 17:35:14,077 | INFO     | will attempt to kill all subprocesses of pid=981472
[2026-04-27 19:36:11] 2026-04-27 17:35:14,364 | INFO     | process IDs to be killed: [981472] (in reverse order)
[2026-04-27 19:36:11] 2026-04-27 17:35:14,510 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 19:36:11] 2026-04-27 17:35:14,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 19:36:11] 2026-04-27 17:35:14,534 | INFO     | did not find any defunct processes belonging to 981472
[2026-04-27 19:36:11] 2026-04-27 17:35:14,556 | INFO     | did not find any defunct processes belonging to 981472
[2026-04-27 19:36:11] 2026-04-27 17:35:14,556 | INFO     | Ready for new job
[2026-04-27 19:36:11] 2026-04-27 17:35:14,557 | INFO     | ***************************************
[2026-04-27 19:36:11] 2026-04-27 17:35:14,557 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 19:36:11] 2026-04-27 17:35:14,557 | INFO     | ***************************************
[2026-04-27 19:36:11] 2026-04-27 17:35:14,557 | INFO     | 
[2026-04-27 19:36:11] 2026-04-27 17:35:14,562 | INFO     | architecture information:
[2026-04-27 19:36:11] 2026-04-27 17:35:14,562 | INFO     | executing command: cat /etc/os-release
[2026-04-27 19:36:11] 2026-04-27 17:35:14,578 | INFO     | cat /etc/os-release:
[2026-04-27 19:36:11] NAME="CentOS Linux"
[2026-04-27 19:36:11] VERSION="7 (Core)"
[2026-04-27 19:36:11] ID="centos"
[2026-04-27 19:36:11] ID_LIKE="rhel fedora"
[2026-04-27 19:36:11] VERSION_ID="7"
[2026-04-27 19:36:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 19:36:11] ANSI_COLOR="0;31"
[2026-04-27 19:36:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 19:36:11] HOME_URL="https://www.centos.org/"
[2026-04-27 19:36:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 19:36:11] 
[2026-04-27 19:36:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 19:36:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 19:36:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 19:36:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 19:36:11] 
[2026-04-27 19:36:11] 2026-04-27 17:35:14,579 | INFO     | ***************************************
[2026-04-27 19:36:11] 2026-04-27 17:35:15,081 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/1
[2026-04-27 19:36:11] 2026-04-27 17:35:15,097 | INFO     | sufficient remaining disk space (20681064448 B)
[2026-04-27 19:36:11] 2026-04-27 17:35:15,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 19:36:11] 2026-04-27 17:35:15,097 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 19:36:11] 2026-04-27 17:35:15,097 | INFO     | update_server=False
[2026-04-27 19:36:11] 2026-04-27 17:35:15,097 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 19:36:11] 2026-04-27 17:35:15,349 | INFO     | all data control threads have been joined
[2026-04-27 19:36:11] 2026-04-27 17:35:15,357 | INFO     | all payload control threads have been joined
[2026-04-27 19:36:11] 2026-04-27 17:35:15,534 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 19:36:11] 2026-04-27 17:35:15,534 | INFO     | aborting loop
[2026-04-27 19:36:11] 2026-04-27 17:35:15,859 | INFO     | all job control threads have been joined
[2026-04-27 19:36:11] 2026-04-27 17:35:16,103 | INFO     | [job] retrieve thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,104 | INFO     | [payload] failed_post thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,201 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 19:36:11] 2026-04-27 17:35:16,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 19:36:11] 2026-04-27 17:35:16,354 | INFO     | [data] control thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,362 | INFO     | [payload] control thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,540 | INFO     | [job] job monitor thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,737 | INFO     | [payload] validate_post thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:16,865 | INFO     | [job] control thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:17,086 | INFO     | [job] validate thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:17,272 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:17,435 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:17,516 | INFO     | [data] copytool_in thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:17,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 19:36:11] 2026-04-27 17:35:18,230 | INFO     | [data] copytool_out thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:18,669 | INFO     | [job] queue monitor thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:20,322 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:25,784 | INFO     | job.realtimelogging is not enabled
[2026-04-27 19:36:11] 2026-04-27 17:35:26,789 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 19:36:11] 2026-04-27 17:35:44,944 | INFO     | PID=975668 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-27 19:36:11] 2026-04-27 17:35:44,944 | INFO     | .. there are 15 such processes running
[2026-04-27 19:36:11] 2026-04-27 17:35:44,946 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 19:36:11] 2026-04-27 17:35:44,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 19:36:11] 2026-04-27 17:35:44,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 19:36:11] 2026-04-27 17:36:05,776 | INFO     | [monitor] cgroup control has ended
[2026-04-27 19:36:11] 2026-04-27 17:36:06,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23006246594368)>', '<ExcThread(monitor, started 23006012524288)>']
[2026-04-27 19:36:11] 2026-04-27 17:36:07,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 19:36:11] 2026-04-27 17:36:07,054 | INFO     | [monitor] control thread has ended
[2026-04-27 19:36:11] 2026-04-27 17:36:11,247 | INFO     | all workflow threads have been joined
[2026-04-27 19:36:11] 2026-04-27 17:36:11,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 19:36:11] 2026-04-27 17:36:11,247 | INFO     | traces error code: 0
[2026-04-27 19:36:11] 2026-04-27 17:36:11,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 19:36:11] 2026-04-27 17:36:11,409 [wrapper] ==== pilot stdout END ====
[2026-04-27 19:36:11] 2026-04-27 17:36:11,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 19:36:11] 2026-04-27 17:36:11,413 [wrapper] pilotpid: 975668
[2026-04-27 19:36:11] 2026-04-27 17:36:11,415 [wrapper] Pilot exit status: 0
[2026-04-27 19:36:11] 2026-04-27 17:36:11,423 [wrapper] pandaids: 7114609775
[2026-04-27 19:36:11] 2026-04-27 17:36:11,528 [wrapper] cleanup supervisor_pilot 1095496 975669
[2026-04-27 19:36:11] 2026-04-27 17:36:11,531 [wrapper] Test setup, not cleaning
[2026-04-27 19:36:11] 2026-04-27 17:36:11,533 [wrapper] apfmon messages muted
[2026-04-27 19:36:11] 2026-04-27 17:36:11,536 [wrapper] ==== wrapper stdout END ====
[2026-04-27 19:36:11] 2026-04-27 17:36:11,538 [wrapper] ==== wrapper stderr END ====
[2026-04-27 19:36:11]  *** Error codes and diagnostics ***
[2026-04-27 19:36:11]     "exeErrorCode": 0,
[2026-04-27 19:36:11]     "pilotErrorCode": 0,
[2026-04-27 19:36:11]  *** Listing of results directory ***
[2026-04-27 19:36:11] total 453428
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-27 19:36:11] -rwx------. 1 boinc boinc     36322 Apr 26 15:54 runpilot2-wrapper.sh
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc      5631 Apr 26 16:01 queuedata.json
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc       100 Apr 27 19:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 19:36:11] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 19:06 run_atlas
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc       105 Apr 27 19:06 job.xml
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc      6630 Apr 27 19:06 init_data.xml
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc 278203869 Apr 27 19:06 EVNT.49539591._000476.pool.root.1
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc     15667 Apr 27 19:06 start_atlas.sh
[2026-04-27 19:36:11] drwxrwx--x. 2 boinc boinc      4096 Apr 27 19:06 shared
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc    697440 Apr 27 19:06 input.tar.gz
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc         0 Apr 27 19:06 boinc_lockfile
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc      2607 Apr 27 19:06 pandaJob.out
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc    997697 Apr 27 19:06 agis_schedconf.cvmfs.json
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc   1512704 Apr 27 19:06 agis_ddmendpoints.agis.ALL.json
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc       445 Apr 27 19:07 workernode_map.json
[2026-04-27 19:36:11] drwx------. 5 boinc boinc      4096 Apr 27 19:07 pilot3
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc 180875757 Apr 27 19:34 HITS.49545114._035290.pool.root.1
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc       487 Apr 27 19:34 boinc_task_state.xml
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc      1029 Apr 27 19:35 memory_monitor_summary.json
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc    336809 Apr 27 19:35 log.49545114._035290.job.log.tgz.1
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc      6380 Apr 27 19:35 heartbeat_new.json
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc      6271 Apr 27 19:35 heartbeat.json
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc        95 Apr 27 19:35 pilot_heartbeat.json
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc      8192 Apr 27 19:35 boinc_mmap_file
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc        27 Apr 27 19:35 wrapper_checkpoint.txt
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc      4904 Apr 27 19:36 pilotlog.txt
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc    205744 Apr 27 19:36 log.49545114._035290.job.log.1
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc       357 Apr 27 19:36 output.list
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc       410 Apr 27 19:36 runtime_log
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc    563200 Apr 27 19:36 result.tar.gz
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc      8846 Apr 27 19:36 runtime_log.err
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc       660 Apr 27 19:36 1915ed004c9e.diag
[2026-04-27 19:36:11] -rw-r--r--. 1 boinc boinc     21020 Apr 27 19:36 stderr.txt
[2026-04-27 19:36:11] HITS file was successfully produced:
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc 180875757 Apr 27 19:34 shared/HITS.pool.root.1
[2026-04-27 19:36:11]  *** Contents of shared directory: ***
[2026-04-27 19:36:11] total 449584
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc 278203869 Apr 27 19:06 ATLAS.root_0
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc     15667 Apr 27 19:06 start_atlas.sh
[2026-04-27 19:36:11] -rw-r--r--. 2 boinc boinc    697440 Apr 27 19:06 input.tar.gz
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc 180875757 Apr 27 19:34 HITS.pool.root.1
[2026-04-27 19:36:11] -rw-------. 1 boinc boinc    563200 Apr 27 19:36 result.tar.gz
19:36:13 (971107): run_atlas exited; CPU time 17674.403020
19:36:13 (971107): called boinc_finish(0)

</stderr_txt>
]]>

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