Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-28 20:07:37 (19084): vboxwrapper version 26210
2026-04-28 20:07:37 (19084): BOINC client version: 8.2.9
2026-04-28 20:07:38 (19084): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-04-28 20:07:39 (19084): Successfully copied 'init_data.xml' to the shared directory.
2026-04-28 20:07:40 (19084): Create VM. (boinc_4eb642005f5537a6, slot#0)
2026-04-28 20:07:40 (19084): Setting Memory Size for VM. (4600MB)
2026-04-28 20:07:40 (19084): Setting CPU Count for VM. (6)
2026-04-28 20:07:41 (19084): Setting Chipset Options for VM.
2026-04-28 20:07:41 (19084): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-28 20:07:41 (19084): Setting Boot Options for VM.
2026-04-28 20:07:42 (19084): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-28 20:07:42 (19084): Enabling VM Network Access.
2026-04-28 20:07:42 (19084): Disabling USB Support for VM.
2026-04-28 20:07:43 (19084): Disabling COM Port Support for VM.
2026-04-28 20:07:43 (19084): Disabling LPT Port Support for VM.
2026-04-28 20:07:43 (19084): Disabling Audio Support for VM.
2026-04-28 20:07:44 (19084): Disabling Clipboard Support for VM.
2026-04-28 20:07:44 (19084): Disabling Drag and Drop Support for VM.
2026-04-28 20:07:44 (19084): Adding storage controller(s) to VM.
2026-04-28 20:07:45 (19084): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-28 20:07:48 (19084): Adding VirtualBox Guest Additions to VM.
2026-04-28 20:07:48 (19084): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-28 20:07:48 (19084): forwarding host port 65288 to guest port 80
2026-04-28 20:07:48 (19084): Enabling remote desktop for VM.
2026-04-28 20:07:49 (19084): Required extension pack not installed, remote desktop not enabled.
2026-04-28 20:07:49 (19084): Enabling shared directory for VM.
2026-04-28 20:07:49 (19084): Starting VM using VBoxManage interface. (boinc_4eb642005f5537a6, slot#0)
2026-04-28 20:07:56 (19084): Successfully started VM. (PID = '16728')
2026-04-28 20:07:56 (19084): Reporting VM Process ID to BOINC.
2026-04-28 20:07:56 (19084): Guest Log: BIOS: VirtualBox 7.2.6
2026-04-28 20:07:56 (19084): Guest Log: CPUID EDX: 0x178bfbff
2026-04-28 20:07:56 (19084): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-28 20:07:56 (19084): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-28 20:07:56 (19084): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-28 20:07:56 (19084): Detected: Web Application Enabled (http://localhost:65288)
2026-04-28 20:07:56 (19084): Preference change detected
2026-04-28 20:07:56 (19084): Setting CPU throttle for VM. (50%)
2026-04-28 20:07:56 (19084): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-28 20:07:58 (19084): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-28 20:07:58 (19084): Guest Log: BIOS: Booting from Hard Disk...
2026-04-28 20:08:03 (19084): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-28 20:08:03 (19084): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-28 20:08:03 (19084): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-28 20:08:13 (19084): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-28 20:08:13 (19084): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-28 20:08:23 (19084): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000143 main     Log opened 2026-04-28T20:08:20.248465000Z
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000234 main     OS Product: Linux
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000257 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000275 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000291 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000291 main     Process ID: 1343
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000291 main     Package type: LINUX_64BITS_GENERIC
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.000880 main     5.2.32 r132073 started. Verbose level = 0
2026-04-28 20:08:23 (19084): Guest Log: 00:00:00.005928 automount vbsvcAutoMountWorker: Shared folder 'D_DRIVE' was mounted to '/media/sf_D_DRIVE'
2026-04-28 20:08:23 (19084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-28 20:08:23 (19084): Guest Log: [INFO] Mounting shared directory
2026-04-28 20:08:23 (19084): Guest Log: [INFO] Checking for init_data.xml
2026-04-28 20:08:33 (19084): Guest Log: 00:00:10.003836 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 018 856 000ns (GuestNow=1 777 403 312 231 598 000 ns GuestLast=1 777 406 900 250 454 000 ns fSetTimeLastLoop=true )
2026-04-28 20:09:24 (19084): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-28 20:09:24 (19084): Guest Log: [INFO] Detected branch: prod
2026-04-28 20:09:24 (19084): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-28 20:09:24 (19084): Guest Log: Copying input files
2026-04-28 20:09:27 (19084): Guest Log: Copied input files into RunAtlas.
2026-04-28 20:09:27 (19084): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-28 20:09:27 (19084): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-28 20:09:27 (19084): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-28 20:09:27 (19084): Guest Log: Further information can be found at the LHC@home message board.
2026-04-28 20:09:37 (19084): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-28 20:09:37 (19084): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-28 20:09:37 (19084): Guest Log: 2.6.3.0 1642 0 32172 158977 3 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-04-28 20:09:39 (19084): Guest Log: copied the webapp to /var/www
2026-04-28 20:09:39 (19084): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-28 20:09:39 (19084): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-28 20:09:40 (19084): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-28 20:09:40 (19084): Guest Log:  *** Starting ATLAS job. (PandaID=7114701145 taskID=49888948) ***
2026-04-28 21:47:56 (19084): Status Report: Elapsed Time: '6000.000000'
2026-04-28 21:47:56 (19084): Status Report: CPU Time: '19805.781250'
2026-04-28 23:24:51 (19084): Guest Log:  *** Job finished ***
2026-04-28 23:24:51 (19084): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:23,492 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:23,492 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:43,117 | INFO     | [monitor] cgroup control has ended
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:43,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991142262592)>', '<ExcThread(monitor, started 139990323406592)>']
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:43,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:43,644 | INFO     | [monitor] control thread has ended
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:48,619 | INFO     | all workflow threads have been joined
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:48,619 | INFO     | end of generic workflow (traces error code: 0)
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:48,619 | INFO     | traces error code: 0
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:48,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,192 [wrapper] ==== pilot stdout END ====
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,195 [wrapper] ==== wrapper stdout RESUME ====
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,197 [wrapper] pilotpid: 6053
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,200 [wrapper] Pilot exit status: 0
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,274 [wrapper] pandaids: 7114701145
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,292 [wrapper] cleanup supervisor_pilot 27582 6054
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,295 [wrapper] Test setup, not cleaning
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,299 [wrapper] apfmon messages muted
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,301 [wrapper] ==== wrapper stdout END ====
2026-04-28 23:24:51 (19084): Guest Log: 2026-04-28 22:24:49,303 [wrapper] ==== wrapper stderr END ====
2026-04-28 23:24:51 (19084): Guest Log:  *** Error codes and diagnostics ***
2026-04-28 23:24:51 (19084): Guest Log:     "exeErrorCode": 0,
2026-04-28 23:24:51 (19084): Guest Log:     "pilotErrorCode": 0,
2026-04-28 23:24:51 (19084): Guest Log:  *** Listing of results directory ***
2026-04-28 23:24:51 (19084): Guest Log: total 174888
2026-04-28 23:24:51 (19084): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 26 13:47 runpilot2-wrapper.sh
2026-04-28 23:24:51 (19084): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 26 13:53 pilot3.tar.gz
2026-04-28 23:24:51 (19084): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 26 13:54 queuedata.json
2026-04-28 23:24:51 (19084): Guest Log: -rwxr-xr-x. 1 atlas atlas    697410 Apr 28 19:09 input.tar.gz
2026-04-28 23:24:51 (19084): Guest Log: -rwxr-xr-x. 1 atlas atlas      8554 Apr 28 19:09 init_data.xml
2026-04-28 23:24:51 (19084): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 28 19:09 start_atlas.sh
2026-04-28 23:24:51 (19084): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 28 19:09 EVNT.49888946._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-28 23:24:51 (19084): Guest Log: -rw-r--r--. 1 atlas atlas      2598 Apr 28 19:09 pandaJob.out
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas   1001831 Apr 28 19:10 agis_schedconf.cvmfs.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas       424 Apr 28 19:10 workernode_map.json
2026-04-28 23:24:51 (19084): Guest Log: drwx------. 5 atlas atlas      4096 Apr 28 19:10 pilot3
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas 172216570 Apr 28 22:23 HITS.49888948._000035.pool.root.1
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas      1032 Apr 28 22:23 memory_monitor_summary.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas   1512704 Apr 28 22:23 agis_ddmendpoints.agis.ALL.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas    362149 Apr 28 22:23 log.49888948._000035.job.log.tgz.1
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas        95 Apr 28 22:23 pilot_heartbeat.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas      6380 Apr 28 22:23 heartbeat_new.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas      6271 Apr 28 22:23 heartbeat.json
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas      4876 Apr 28 22:24 pilotlog.txt
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas   1037600 Apr 28 22:24 log.49888948._000035.job.log.1
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas       357 Apr 28 22:24 output.list
2026-04-28 23:24:51 (19084): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 28 22:24 runtime_log
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas   1413120 Apr 28 22:24 result.tar.gz
2026-04-28 23:24:51 (19084): Guest Log: -rw-r--r--. 1 atlas atlas      8384 Apr 28 22:24 runtime_log.err
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas       661 Apr 28 22:24 17818e9fceee.diag
2026-04-28 23:24:51 (19084): Guest Log: Looking for outputfile HITS.49888948._000035.pool.root.1
2026-04-28 23:24:51 (19084): Guest Log: HITS file was successfully produced
2026-04-28 23:24:51 (19084): Guest Log: -rw-------. 1 atlas atlas 172216570 Apr 28 22:23 /home/atlas/RunAtlas/HITS.49888948._000035.pool.root.1
2026-04-28 23:24:52 (19084): Guest Log: Successfully finished the ATLAS job!
2026-04-28 23:24:52 (19084): Guest Log: Copying the results back to the shared directory!
2026-04-28 23:24:52 (19084): Guest Log:  *** Contents of shared directory: ***
2026-04-28 23:24:52 (19084): Guest Log: total 582892
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root 422518279 Apr 28 19:07 ATLAS.root_0
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root 172216570 Apr 28 22:24 HITS.pool.root.1
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root      8554 Apr 28 19:07 init_data.xml
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root    697410 Apr 26 15:12 input.tar.gz
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root   1413120 Apr 28 22:24 result.tar.gz
2026-04-28 23:24:52 (19084): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 26 15:12 start_atlas.sh
2026-04-28 23:24:52 (19084): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-28 23:24:52 (19084): VM Completion File Detected.
2026-04-28 23:24:52 (19084): Powering off VM.
2026-04-28 23:24:53 (19084): Successfully stopped VM.
2026-04-28 23:24:53 (19084): Deregistering VM. (boinc_4eb642005f5537a6, slot#0)
2026-04-28 23:24:53 (19084): Removing network bandwidth throttle group from VM.
2026-04-28 23:24:53 (19084): Removing VM from VirtualBox.
2026-04-28 23:24:58 (19084): called boinc_finish(0)

</stderr_txt>
]]>

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