Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:32:35 (25808): wrapper (7.7.26015): starting
21:32:35 (25808): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 21:32:35] Arguments: --nthreads 8
[2026-04-26 21:32:35] Threads: 8
[2026-04-26 21:32:35] Checking for CVMFS
[2026-04-26 21:32:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 21:32:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 21:32:38] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 21:32:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 21:32:40] 2.11.2.0 28119 5177 77204 158901 2 53 14366357 25165824 96 130560 0 2022967 99.982 381932 5489 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 21:32:40] CVMFS is ok
[2026-04-26 21:32:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 21:32:40] Checking for apptainer binary...
[2026-04-26 21:32:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 21:32:40] Running /usr/bin/apptainer --version
[2026-04-26 21:32:40] apptainer version 1.3.2-1.el7
[2026-04-26 21:32:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 21:32:49] cg-vwn439.simple-grid.lan
[2026-04-26 21:32:49] apptainer works
[2026-04-26 21:32:49] Set ATHENA_PROC_NUMBER=8
[2026-04-26 21:32:49] Set ATHENA_CORE_NUMBER=8
[2026-04-26 21:32:49] Starting ATLAS job with PandaID=7114714083
[2026-04-26 21:32:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 01:59:46]  *** The last 200 lines of the pilot log: ***
[2026-04-27 01:59:46] 2026-04-26 23:58:31,874 | INFO     | this job has now completed (state=finished)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,875 | INFO     | log transfer has been attempted: DONE
[2026-04-27 01:59:46] 2026-04-26 23:58:31,875 | INFO     | job 7114714083 has finished - writing final server update
[2026-04-27 01:59:46] 2026-04-26 23:58:31,875 | INFO     | total number of processed events: 400 (read)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,877 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7114714083/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,878 | INFO     | extracted standard info from prmon json
[2026-04-27 01:59:46] 2026-04-26 23:58:31,878 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 01:59:46] 2026-04-26 23:58:31,878 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 01:59:46] 2026-04-26 23:58:31,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 01:59:46] 2026-04-26 23:58:31,884 | INFO     | fitting pss+swap vs Time
[2026-04-27 01:59:46] 2026-04-26 23:58:31,884 | INFO     | sum of square deviations: 4787066500.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,891 | INFO     | sum of deviations: 108239013721.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,891 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,891 | INFO     | mean y: 2452337.5903614457
[2026-04-27 01:59:46] 2026-04-26 23:58:31,891 | INFO     | intersect: 2452337.5903614457
[2026-04-27 01:59:46] 2026-04-26 23:58:31,892 | INFO     | chi2: 7.863263336996798
[2026-04-27 01:59:46] 2026-04-26 23:58:31,893 | INFO     | sum of square deviations: 4504437945.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,895 | INFO     | sum of deviations: 122490496638.5
[2026-04-27 01:59:46] 2026-04-26 23:58:31,895 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,895 | INFO     | mean y: 2459881.2909836066
[2026-04-27 01:59:46] 2026-04-26 23:58:31,895 | INFO     | intersect: 2459881.2909836066
[2026-04-27 01:59:46] 2026-04-26 23:58:31,896 | INFO     | chi2: 7.161307593889779
[2026-04-27 01:59:46] 2026-04-26 23:58:31,896 | INFO     | current chi2=7.161307593889779 (change=8.927028296309302 %)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,896 | INFO     | right removable region: 243
[2026-04-27 01:59:46] 2026-04-26 23:58:31,897 | INFO     | sum of square deviations: 4504437945.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,900 | INFO     | sum of deviations: 20147992316.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,900 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,900 | INFO     | mean y: 2499843.0573770492
[2026-04-27 01:59:46] 2026-04-26 23:58:31,900 | INFO     | intersect: 2499843.0573770492
[2026-04-27 01:59:46] 2026-04-26 23:58:31,900 | INFO     | chi2: 2.822435238668268
[2026-04-27 01:59:46] 2026-04-26 23:58:31,901 | INFO     | current chi2=2.822435238668268 (change=64.10605727282898 %)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,901 | INFO     | sum of square deviations: 4233158440.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,903 | INFO     | sum of deviations: -32248104267.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,903 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,904 | INFO     | mean y: 2529175.460251046
[2026-04-27 01:59:46] 2026-04-26 23:58:31,904 | INFO     | intersect: 2529175.460251046
[2026-04-27 01:59:46] 2026-04-26 23:58:31,904 | INFO     | chi2: 0.9403288279565786
[2026-04-27 01:59:46] 2026-04-26 23:58:31,904 | INFO     | current chi2=0.9403288279565786 (change=66.6837766523826 %)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,905 | INFO     | sum of square deviations: 3972995422.5
[2026-04-27 01:59:46] 2026-04-26 23:58:31,907 | INFO     | sum of deviations: -33589995809.000004
[2026-04-27 01:59:46] 2026-04-26 23:58:31,907 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,907 | INFO     | mean y: 2529912.846153846
[2026-04-27 01:59:46] 2026-04-26 23:58:31,907 | INFO     | intersect: 2529912.846153846
[2026-04-27 01:59:46] 2026-04-26 23:58:31,908 | INFO     | chi2: 0.9044337881946134
[2026-04-27 01:59:46] 2026-04-26 23:58:31,908 | INFO     | current chi2=0.9044337881946134 (change=3.8172858998663703 %)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,908 | INFO     | left removable region: 15
[2026-04-27 01:59:46] 2026-04-26 23:58:31,909 | INFO     | sum of square deviations: 3675146117.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,911 | INFO     | sum of deviations: -17350115075.999996
[2026-04-27 01:59:46] 2026-04-26 23:58:31,911 | INFO     | mean x (centered): 0.0
[2026-04-27 01:59:46] 2026-04-26 23:58:31,911 | INFO     | mean y: 2539683.535087719
[2026-04-27 01:59:46] 2026-04-26 23:58:31,911 | INFO     | intersect: 2539683.535087719
[2026-04-27 01:59:46] 2026-04-26 23:58:31,911 | INFO     | chi2: 0.116087527832738
[2026-04-27 01:59:46] 2026-04-26 23:58:31,912 | INFO     | current memory leak: -4.72 B/s (using 228 data points, chi2=0.12)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,912 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | ..............................
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . Timing measurements:
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . get job = 0 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . initial setup = 139 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . payload setup = 138 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . stage-in = 0 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . payload execution = 15280 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,913 | INFO     | . stage-out = 4 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,914 | INFO     | . log creation = 1 s
[2026-04-27 01:59:46] 2026-04-26 23:58:31,914 | INFO     | ..............................
[2026-04-27 01:59:46] 2026-04-26 23:58:32,453 | INFO     | 
[2026-04-27 01:59:46] 2026-04-26 23:58:32,453 | INFO     | job summary report
[2026-04-27 01:59:46] 2026-04-26 23:58:32,453 | INFO     | --------------------------------------------------
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | PanDA job id: 7114714083
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | task id: 49499824
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | errors: (none)
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | pilot state: finished 
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | transexitcode: 0
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | exeerrorcode: 0
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | exeerrordiag: 
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | exitcode: 0
[2026-04-27 01:59:46] 2026-04-26 23:58:32,454 | INFO     | exitmsg: OK
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | cpuconsumptiontime: 57716 s
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | nevents: 400
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | neventsw: 0
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | pid: 1894
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | pgrp: 1894
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | corecount: 8
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | event service: False
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | sizes: {0: 2273997, 1: 2274682, 2: 2275083, 3: 2276511, 13: 2276539, 15423: 2307712, 15424: 2307839, 15429: 2316893, 15430: 2317143}
[2026-04-27 01:59:46] 2026-04-26 23:58:32,455 | INFO     | --------------------------------------------------
[2026-04-27 01:59:46] 2026-04-26 23:58:32,456 | INFO     | 
[2026-04-27 01:59:46] 2026-04-26 23:58:32,456 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-27 01:59:46] 2026-04-26 23:58:32,954 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,954 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | job 7114714083 has completed (purged errors)
[2026-04-27 01:59:46] 2026-04-26 23:58:32,956 | INFO     | overall cleanup function is called
[2026-04-27 01:59:46] 2026-04-26 23:58:33,965 | INFO     | --- collectZombieJob: --- 10, [1894]
[2026-04-27 01:59:46] 2026-04-26 23:58:33,965 | INFO     | zombie collector waiting for pid 1894
[2026-04-27 01:59:46] 2026-04-26 23:58:33,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 01:59:46] 2026-04-26 23:58:33,966 | INFO     | collected zombie processes
[2026-04-27 01:59:46] 2026-04-26 23:58:33,966 | INFO     | will attempt to kill all subprocesses of pid=1894
[2026-04-27 01:59:46] 2026-04-26 23:58:34,030 | INFO     | process IDs to be killed: [1894] (in reverse order)
[2026-04-27 01:59:46] 2026-04-26 23:58:34,767 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 01:59:46] 2026-04-26 23:58:34,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 01:59:46] 2026-04-26 23:58:34,769 | INFO     | did not find any defunct processes belonging to 1894
[2026-04-27 01:59:46] 2026-04-26 23:58:34,771 | INFO     | did not find any defunct processes belonging to 1894
[2026-04-27 01:59:46] 2026-04-26 23:58:34,771 | INFO     | Ready for new job
[2026-04-27 01:59:46] 2026-04-26 23:58:34,773 | INFO     | ***************************************
[2026-04-27 01:59:46] 2026-04-26 23:58:34,773 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 01:59:46] 2026-04-26 23:58:34,773 | INFO     | ***************************************
[2026-04-27 01:59:46] 2026-04-26 23:58:34,773 | INFO     | 
[2026-04-27 01:59:46] 2026-04-26 23:58:34,774 | INFO     | pilot is running in a VM
[2026-04-27 01:59:46] 2026-04-26 23:58:34,774 | INFO     | architecture information:
[2026-04-27 01:59:46] 2026-04-26 23:58:34,788 | INFO     | executing command: cat /etc/os-release
[2026-04-27 01:59:46] 2026-04-26 23:58:35,127 | INFO     | cat /etc/os-release:
[2026-04-27 01:59:46] NAME="CentOS Linux"
[2026-04-27 01:59:46] VERSION="7 (Core)"
[2026-04-27 01:59:46] ID="centos"
[2026-04-27 01:59:46] ID_LIKE="rhel fedora"
[2026-04-27 01:59:46] VERSION_ID="7"
[2026-04-27 01:59:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 01:59:46] ANSI_COLOR="0;31"
[2026-04-27 01:59:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 01:59:46] HOME_URL="https://www.centos.org/"
[2026-04-27 01:59:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 01:59:46] 
[2026-04-27 01:59:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 01:59:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 01:59:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 01:59:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 01:59:46] 
[2026-04-27 01:59:46] 2026-04-26 23:58:35,128 | INFO     | ***************************************
[2026-04-27 01:59:46] 2026-04-26 23:58:35,634 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-27 01:59:46] 2026-04-26 23:58:35,869 | INFO     | sufficient remaining disk space (494163460096 B)
[2026-04-27 01:59:46] 2026-04-26 23:58:35,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 01:59:46] 2026-04-26 23:58:35,869 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 01:59:46] 2026-04-26 23:58:35,869 | INFO     | update_server=False
[2026-04-27 01:59:46] 2026-04-26 23:58:35,869 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 01:59:46] 2026-04-26 23:58:35,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 01:59:46] 2026-04-26 23:58:35,874 | INFO     | aborting loop
[2026-04-27 01:59:46] 2026-04-26 23:58:35,969 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 01:59:46] 2026-04-26 23:58:36,105 | INFO     | all data control threads have been joined
[2026-04-27 01:59:46] 2026-04-26 23:58:36,336 | INFO     | all job control threads have been joined
[2026-04-27 01:59:46] 2026-04-26 23:58:36,875 | INFO     | [job] retrieve thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:36,880 | INFO     | [job] job monitor thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:36,887 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:36,961 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:36,981 | INFO     | all payload control threads have been joined
[2026-04-27 01:59:46] 2026-04-26 23:58:37,080 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 01:59:46] 2026-04-26 23:58:37,111 | INFO     | [data] control thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,294 | INFO     | [payload] failed_post thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,342 | INFO     | [job] control thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,689 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,730 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,818 | INFO     | [payload] validate_post thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 01:59:46] 2026-04-26 23:58:37,914 | INFO     | [data] copytool_in thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,976 | INFO     | [data] copytool_out thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:37,987 | INFO     | [payload] control thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:38,067 | INFO     | [job] validate thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:38,086 | INFO     | [job] queue monitor thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:58:41,829 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 01:59:46] 2026-04-26 23:59:05,159 | INFO     | PID=29829 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 01:59:46] 2026-04-26 23:59:05,159 | INFO     | .. there are 2 such processes running
[2026-04-27 01:59:46] 2026-04-26 23:59:05,159 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 01:59:46] 2026-04-26 23:59:05,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 01:59:46] 2026-04-26 23:59:05,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 01:59:46] 2026-04-26 23:59:35,000 | INFO     | [monitor] cgroup control has ended
[2026-04-27 01:59:46] 2026-04-26 23:59:36,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438014281536)>', '<ExcThread(monitor, started 140437377513216)>']
[2026-04-27 01:59:46] 2026-04-26 23:59:36,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 01:59:46] 2026-04-26 23:59:36,345 | INFO     | [monitor] control thread has ended
[2026-04-27 01:59:46] 2026-04-26 23:59:41,279 | INFO     | all workflow threads have been joined
[2026-04-27 01:59:46] 2026-04-26 23:59:41,279 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 01:59:46] 2026-04-26 23:59:41,280 | INFO     | traces error code: 0
[2026-04-27 01:59:46] 2026-04-26 23:59:41,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 01:59:46] 2026-04-26 23:59:41,806 [wrapper] ==== pilot stdout END ====
[2026-04-27 01:59:46] 2026-04-26 23:59:41,890 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 01:59:46] 2026-04-26 23:59:41,983 [wrapper] pilotpid: 29829
[2026-04-27 01:59:46] 2026-04-26 23:59:42,085 [wrapper] Pilot exit status: 0
[2026-04-27 01:59:46] 2026-04-26 23:59:42,602 [wrapper] pandaids: 7114714083
[2026-04-27 01:59:46] 2026-04-26 23:59:43,556 [wrapper] cleanup supervisor_pilot  9147 29830
[2026-04-27 01:59:46] 2026-04-26 23:59:43,623 [wrapper] Test setup, not cleaning
[2026-04-27 01:59:46] 2026-04-26 23:59:43,693 [wrapper] apfmon messages muted
[2026-04-27 01:59:46] 2026-04-26 23:59:43,823 [wrapper] ==== wrapper stdout END ====
[2026-04-27 01:59:46] 2026-04-26 23:59:43,923 [wrapper] ==== wrapper stderr END ====
[2026-04-27 01:59:46]  *** Error codes and diagnostics ***
[2026-04-27 01:59:46]     "exeErrorCode": 0,
[2026-04-27 01:59:46]     "pilotErrorCode": 0,
[2026-04-27 01:59:46]  *** Listing of results directory ***
[2026-04-27 01:59:46] total 433480
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc    683926 Apr 26 14:59 pilot3.tar.gz
[2026-04-27 01:59:46] -rwx------. 1 boinc boinc     36322 Apr 26 15:46 runpilot2-wrapper.sh
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:50 queuedata.json
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc       100 Apr 26 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 01:59:46] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 21:32 run_atlas
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc       105 Apr 26 21:32 job.xml
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc 260954616 Apr 26 21:32 EVNT.49474788._000006.pool.root.1
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc      6306 Apr 26 21:32 init_data.xml
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:32 start_atlas.sh
[2026-04-27 01:59:46] drwxrwx--x. 2 boinc boinc        68 Apr 26 21:32 shared
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc    697421 Apr 26 21:32 input.tar.gz
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc         0 Apr 26 21:32 boinc_lockfile
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc      2570 Apr 26 21:32 pandaJob.out
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc       415 Apr 26 21:41 workernode_map.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc    997522 Apr 26 21:41 agis_schedconf.cvmfs.json
[2026-04-27 01:59:46] drwx------. 5 boinc boinc      4096 Apr 26 21:41 pilot3
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc 175121894 Apr 27 01:56 HITS.49499824._000308.pool.root.1
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc       488 Apr 27 01:57 boinc_task_state.xml
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc      1012 Apr 27 01:58 memory_monitor_summary.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc   1509089 Apr 27 01:58 agis_ddmendpoints.agis.ALL.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc    417685 Apr 27 01:58 log.49499824._000308.job.log.tgz.1
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc        95 Apr 27 01:58 pilot_heartbeat.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc      6329 Apr 27 01:58 heartbeat_new.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc      6220 Apr 27 01:58 heartbeat.json
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc      4883 Apr 27 01:59 pilotlog.txt
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc   1428510 Apr 27 01:59 log.49499824._000308.job.log.1
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc      8192 Apr 27 01:59 boinc_mmap_file
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc        28 Apr 27 01:59 wrapper_checkpoint.txt
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc       357 Apr 27 01:59 output.list
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc       410 Apr 27 01:59 runtime_log
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc   1863680 Apr 27 01:59 result.tar.gz
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc      8439 Apr 27 01:59 runtime_log.err
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc       655 Apr 27 01:59 17366a988d2c.diag
[2026-04-27 01:59:46] -rw-r--r--. 1 boinc boinc     20631 Apr 27 01:59 stderr.txt
[2026-04-27 01:59:46] HITS file was successfully produced:
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc 175121894 Apr 27 01:56 shared/HITS.pool.root.1
[2026-04-27 01:59:46]  *** Contents of shared directory: ***
[2026-04-27 01:59:46] total 428380
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc 260954616 Apr 26 21:32 ATLAS.root_0
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:32 start_atlas.sh
[2026-04-27 01:59:46] -rw-r--r--. 2 boinc boinc    697421 Apr 26 21:32 input.tar.gz
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc 175121894 Apr 27 01:56 HITS.pool.root.1
[2026-04-27 01:59:46] -rw-------. 1 boinc boinc   1863680 Apr 27 01:59 result.tar.gz
01:59:48 (25808): run_atlas exited; CPU time 57867.601640
01:59:48 (25808): called boinc_finish(0)

</stderr_txt>
]]>

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