Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:51 (15392): wrapper (7.7.26015): starting
16:55:51 (15392): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 16:55:51] Arguments: --nthreads 8
[2026-04-26 16:55:51] Threads: 8
[2026-04-26 16:55:51] Checking for CVMFS
[2026-04-26 16:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 16:55:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 16:55:54] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 16:55:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 16:55:56] 2.11.2.0 24173 15745 99768 158890 2 11 23822434 25165825 96 130560 0 6830923 99.849 5961981 15920 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 16:55:56] CVMFS is ok
[2026-04-26 16:55:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 16:55:56] Checking for apptainer binary...
[2026-04-26 16:55:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 16:55:56] Running /usr/bin/apptainer --version
[2026-04-26 16:55:56] apptainer version 1.3.2-1.el7
[2026-04-26 16:55:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 16:56:08] cg-vwn464.simple-grid.lan
[2026-04-26 16:56:08] apptainer works
[2026-04-26 16:56:08] Set ATHENA_PROC_NUMBER=8
[2026-04-26 16:56:08] Set ATHENA_CORE_NUMBER=8
[2026-04-26 16:56:08] Starting ATLAS job with PandaID=7114715621
[2026-04-26 16:56:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 22:43:20]  *** The last 200 lines of the pilot log: ***
[2026-04-26 22:43:20] 2026-04-26 20:42:32,593 | INFO     | this job has now completed (state=finished)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,594 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,594 | INFO     | log transfer has been attempted: DONE
[2026-04-26 22:43:20] 2026-04-26 20:42:32,594 | INFO     | job 7114715621 has finished - writing final server update
[2026-04-26 22:43:20] 2026-04-26 20:42:32,594 | INFO     | total number of processed events: 400 (read)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,600 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-7114715621/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,601 | INFO     | extracted standard info from prmon json
[2026-04-26 22:43:20] 2026-04-26 20:42:32,601 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 22:43:20] 2026-04-26 20:42:32,601 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 22:43:20] 2026-04-26 20:42:32,601 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 22:43:20] 2026-04-26 20:42:32,608 | INFO     | fitting pss+swap vs Time
[2026-04-26 22:43:20] 2026-04-26 20:42:32,608 | INFO     | sum of square deviations: 11042365180.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,612 | INFO     | sum of deviations: 147687967603.00006
[2026-04-26 22:43:20] 2026-04-26 20:42:32,612 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,612 | INFO     | mean y: 2471146.249240122
[2026-04-26 22:43:20] 2026-04-26 20:42:32,612 | INFO     | intersect: 2471146.249240122
[2026-04-26 22:43:20] 2026-04-26 20:42:32,613 | INFO     | chi2: 6.8667668782459055
[2026-04-26 22:43:20] 2026-04-26 20:42:32,613 | INFO     | sum of square deviations: 10546523325.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,617 | INFO     | sum of deviations: 167078894134.4999
[2026-04-26 22:43:20] 2026-04-26 20:42:32,617 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,617 | INFO     | mean y: 2477026.527777778
[2026-04-26 22:43:20] 2026-04-26 20:42:32,617 | INFO     | intersect: 2477026.527777778
[2026-04-26 22:43:20] 2026-04-26 20:42:32,618 | INFO     | chi2: 6.130371503865696
[2026-04-26 22:43:20] 2026-04-26 20:42:32,618 | INFO     | current chi2=6.130371503865696 (change=10.724047975374393 %)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,618 | INFO     | right removable region: 323
[2026-04-26 22:43:20] 2026-04-26 20:42:32,618 | INFO     | sum of square deviations: 10546523325.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,622 | INFO     | sum of deviations: 34761568671.49999
[2026-04-26 22:43:20] 2026-04-26 20:42:32,622 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,622 | INFO     | mean y: 2505856.0833333335
[2026-04-26 22:43:20] 2026-04-26 20:42:32,622 | INFO     | intersect: 2505856.0833333335
[2026-04-26 22:43:20] 2026-04-26 20:42:32,623 | INFO     | chi2: 2.3693100000877885
[2026-04-26 22:43:20] 2026-04-26 20:42:32,623 | INFO     | current chi2=2.3693100000877885 (change=65.49598898436724 %)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,623 | INFO     | sum of square deviations: 10065751520.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,626 | INFO     | sum of deviations: -25039783860.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,627 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,627 | INFO     | mean y: 2524744.764890282
[2026-04-26 22:43:20] 2026-04-26 20:42:32,627 | INFO     | intersect: 2524744.764890282
[2026-04-26 22:43:20] 2026-04-26 20:42:32,627 | INFO     | chi2: 0.8702917769834732
[2026-04-26 22:43:20] 2026-04-26 20:42:32,628 | INFO     | current chi2=0.8702917769834732 (change=63.26813388913959 %)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,628 | INFO     | sum of square deviations: 9599817202.5
[2026-04-26 22:43:20] 2026-04-26 20:42:32,635 | INFO     | sum of deviations: -23342343844.5
[2026-04-26 22:43:20] 2026-04-26 20:42:32,636 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,636 | INFO     | mean y: 2524167.372611465
[2026-04-26 22:43:20] 2026-04-26 20:42:32,636 | INFO     | intersect: 2524167.372611465
[2026-04-26 22:43:20] 2026-04-26 20:42:32,636 | INFO     | chi2: 0.8494784238036321
[2026-04-26 22:43:20] 2026-04-26 20:42:32,637 | INFO     | current chi2=0.8494784238036321 (change=2.3915373820929777 %)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,637 | INFO     | left removable region: 15
[2026-04-26 22:43:20] 2026-04-26 20:42:32,637 | INFO     | sum of square deviations: 9059954057.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,640 | INFO     | sum of deviations: -2331256550.5
[2026-04-26 22:43:20] 2026-04-26 20:42:32,640 | INFO     | mean x (centered): 0.0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,641 | INFO     | mean y: 2531174.814935065
[2026-04-26 22:43:20] 2026-04-26 20:42:32,641 | INFO     | intersect: 2531174.814935065
[2026-04-26 22:43:20] 2026-04-26 20:42:32,641 | INFO     | chi2: 0.05822552926677783
[2026-04-26 22:43:20] 2026-04-26 20:42:32,641 | INFO     | current memory leak: -0.26 B/s (using 308 data points, chi2=0.06)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,642 | INFO     | could have reported an average CPU frequency of 2250 MHz (15 samples)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,642 | INFO     | ..............................
[2026-04-26 22:43:20] 2026-04-26 20:42:32,642 | INFO     | . Timing measurements:
[2026-04-26 22:43:20] 2026-04-26 20:42:32,642 | INFO     | . get job = 0 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,642 | INFO     | . initial setup = 112 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | . payload setup = 229 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | . stage-in = 0 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | . payload execution = 20145 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | . stage-out = 3 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | . log creation = 1 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,643 | INFO     | ..............................
[2026-04-26 22:43:20] 2026-04-26 20:42:32,792 | INFO     | 
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | job summary report
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | --------------------------------------------------
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | PanDA job id: 7114715621
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | task id: 49863851
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | errors: (none)
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | pilot state: finished 
[2026-04-26 22:43:20] 2026-04-26 20:42:32,793 | INFO     | transexitcode: 0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | exeerrorcode: 0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | exeerrordiag: 
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | exitcode: 0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | exitmsg: OK
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | cpuconsumptiontime: 77529 s
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | nevents: 400
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | neventsw: 0
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | pid: 23921
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | pgrp: 23921
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | corecount: 8
[2026-04-26 22:43:20] 2026-04-26 20:42:32,794 | INFO     | event service: False
[2026-04-26 22:43:20] 2026-04-26 20:42:32,795 | INFO     | sizes: {0: 2274678, 1: 2276563, 12: 2276563, 20378: 2309974, 20379: 2309973, 20383: 2319029, 20385: 2319213, 20386: 2319407}
[2026-04-26 22:43:20] 2026-04-26 20:42:32,795 | INFO     | --------------------------------------------------
[2026-04-26 22:43:20] 2026-04-26 20:42:32,795 | INFO     | 
[2026-04-26 22:43:20] 2026-04-26 20:42:32,795 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-04-26 22:43:20] 2026-04-26 20:42:33,361 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 22:43:20] 2026-04-26 20:42:33,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 22:43:20] 2026-04-26 20:42:33,364 | INFO     | job 7114715621 has completed (purged errors)
[2026-04-26 22:43:20] 2026-04-26 20:42:33,364 | INFO     | overall cleanup function is called
[2026-04-26 22:43:20] 2026-04-26 20:42:34,372 | INFO     | --- collectZombieJob: --- 10, [23921]
[2026-04-26 22:43:20] 2026-04-26 20:42:34,373 | INFO     | zombie collector waiting for pid 23921
[2026-04-26 22:43:20] 2026-04-26 20:42:34,373 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 22:43:20] 2026-04-26 20:42:34,373 | INFO     | collected zombie processes
[2026-04-26 22:43:20] 2026-04-26 20:42:34,373 | INFO     | will attempt to kill all subprocesses of pid=23921
[2026-04-26 22:43:20] 2026-04-26 20:42:34,434 | INFO     | process IDs to be killed: [23921] (in reverse order)
[2026-04-26 22:43:20] 2026-04-26 20:42:35,517 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 22:43:20] 2026-04-26 20:42:35,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 22:43:20] 2026-04-26 20:42:35,519 | INFO     | did not find any defunct processes belonging to 23921
[2026-04-26 22:43:20] 2026-04-26 20:42:35,521 | INFO     | did not find any defunct processes belonging to 23921
[2026-04-26 22:43:20] 2026-04-26 20:42:35,522 | INFO     | Ready for new job
[2026-04-26 22:43:20] 2026-04-26 20:42:35,524 | INFO     | ***************************************
[2026-04-26 22:43:20] 2026-04-26 20:42:35,524 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 22:43:20] 2026-04-26 20:42:35,524 | INFO     | ***************************************
[2026-04-26 22:43:20] 2026-04-26 20:42:35,524 | INFO     | 
[2026-04-26 22:43:20] 2026-04-26 20:42:35,525 | INFO     | pilot is running in a VM
[2026-04-26 22:43:20] 2026-04-26 20:42:35,525 | INFO     | architecture information:
[2026-04-26 22:43:20] 2026-04-26 20:42:35,525 | INFO     | executing command: cat /etc/os-release
[2026-04-26 22:43:20] 2026-04-26 20:42:35,816 | INFO     | cat /etc/os-release:
[2026-04-26 22:43:20] NAME="CentOS Linux"
[2026-04-26 22:43:20] VERSION="7 (Core)"
[2026-04-26 22:43:20] ID="centos"
[2026-04-26 22:43:20] ID_LIKE="rhel fedora"
[2026-04-26 22:43:20] VERSION_ID="7"
[2026-04-26 22:43:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 22:43:20] ANSI_COLOR="0;31"
[2026-04-26 22:43:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 22:43:20] HOME_URL="https://www.centos.org/"
[2026-04-26 22:43:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 22:43:20] 
[2026-04-26 22:43:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 22:43:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 22:43:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 22:43:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 22:43:20] 
[2026-04-26 22:43:20] 2026-04-26 20:42:35,816 | INFO     | ***************************************
[2026-04-26 22:43:20] 2026-04-26 20:42:36,320 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-04-26 22:43:20] 2026-04-26 20:42:36,387 | INFO     | sufficient remaining disk space (496500736000 B)
[2026-04-26 22:43:20] 2026-04-26 20:42:36,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 22:43:20] 2026-04-26 20:42:36,388 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 22:43:20] 2026-04-26 20:42:36,388 | INFO     | update_server=False
[2026-04-26 22:43:20] 2026-04-26 20:42:36,388 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 22:43:20] 2026-04-26 20:42:36,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 22:43:20] 2026-04-26 20:42:36,389 | INFO     | aborting loop
[2026-04-26 22:43:20] 2026-04-26 20:42:36,525 | INFO     | all payload control threads have been joined
[2026-04-26 22:43:20] 2026-04-26 20:42:37,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 22:43:20] 2026-04-26 20:42:37,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 22:43:20] 2026-04-26 20:42:37,129 | INFO     | all data control threads have been joined
[2026-04-26 22:43:20] 2026-04-26 20:42:37,394 | INFO     | [job] retrieve thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,395 | INFO     | [job] job monitor thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,531 | INFO     | [payload] control thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,567 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,610 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,642 | INFO     | all job control threads have been joined
[2026-04-26 22:43:20] 2026-04-26 20:42:37,645 | INFO     | [payload] validate_post thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,654 | INFO     | [payload] failed_post thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 22:43:20] 2026-04-26 20:42:37,812 | INFO     | [data] copytool_in thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,816 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:37,950 | INFO     | [job] validate thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:38,136 | INFO     | [data] control thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:38,610 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:38,649 | INFO     | [job] control thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:38,808 | INFO     | [job] queue monitor thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:39,040 | INFO     | [data] copytool_out thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:42:41,063 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 22:43:20] 2026-04-26 20:43:05,108 | INFO     | PID=19435 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-26 22:43:20] 2026-04-26 20:43:05,109 | INFO     | .. there are 2 such processes running
[2026-04-26 22:43:20] 2026-04-26 20:43:05,109 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 22:43:20] 2026-04-26 20:43:05,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 22:43:20] 2026-04-26 20:43:05,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 22:43:20] 2026-04-26 20:43:08,823 | INFO     | [monitor] cgroup control has ended
[2026-04-26 22:43:20] 2026-04-26 20:43:10,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256999495488)>', '<ExcThread(monitor, started 140256569448192)>']
[2026-04-26 22:43:20] 2026-04-26 20:43:11,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 22:43:20] 2026-04-26 20:43:11,148 | INFO     | [monitor] control thread has ended
[2026-04-26 22:43:20] 2026-04-26 20:43:15,266 | INFO     | all workflow threads have been joined
[2026-04-26 22:43:20] 2026-04-26 20:43:15,266 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 22:43:20] 2026-04-26 20:43:15,266 | INFO     | traces error code: 0
[2026-04-26 22:43:20] 2026-04-26 20:43:15,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 22:43:20] 2026-04-26 20:43:15,740 [wrapper] ==== pilot stdout END ====
[2026-04-26 22:43:20] 2026-04-26 20:43:15,851 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 22:43:20] 2026-04-26 20:43:15,896 [wrapper] pilotpid: 19435
[2026-04-26 22:43:20] 2026-04-26 20:43:15,932 [wrapper] Pilot exit status: 0
[2026-04-26 22:43:20] 2026-04-26 20:43:16,356 [wrapper] pandaids: 7114715621
[2026-04-26 22:43:20] 2026-04-26 20:43:17,300 [wrapper] cleanup supervisor_pilot 31766 19436
[2026-04-26 22:43:20] 2026-04-26 20:43:17,404 [wrapper] Test setup, not cleaning
[2026-04-26 22:43:20] 2026-04-26 20:43:17,501 [wrapper] apfmon messages muted
[2026-04-26 22:43:20] 2026-04-26 20:43:17,602 [wrapper] ==== wrapper stdout END ====
[2026-04-26 22:43:20] 2026-04-26 20:43:17,708 [wrapper] ==== wrapper stderr END ====
[2026-04-26 22:43:20]  *** Error codes and diagnostics ***
[2026-04-26 22:43:20]     "exeErrorCode": 0,
[2026-04-26 22:43:20]     "pilotErrorCode": 0,
[2026-04-26 22:43:20]  *** Listing of results directory ***
[2026-04-26 22:43:20] total 476520
[2026-04-26 22:43:20] -rwx------. 1 boinc boinc     36322 Apr 26 15:47 runpilot2-wrapper.sh
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:50 queuedata.json
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc       100 Apr 26 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 22:43:20] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 16:55 run_atlas
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc       105 Apr 26 16:55 job.xml
[2026-04-26 22:43:20] -rw-r--r--. 2 boinc boinc 263817129 Apr 26 16:55 EVNT.49863848._000010.pool.root.1
[2026-04-26 22:43:20] -rw-r--r--. 2 boinc boinc    697436 Apr 26 16:55 input.tar.gz
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc      6307 Apr 26 16:55 init_data.xml
[2026-04-26 22:43:20] -rw-r--r--. 2 boinc boinc     15667 Apr 26 16:55 start_atlas.sh
[2026-04-26 22:43:20] drwxrwx--x. 2 boinc boinc        68 Apr 26 16:55 shared
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc         0 Apr 26 16:55 boinc_lockfile
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc      2649 Apr 26 16:56 pandaJob.out
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc       413 Apr 26 17:02 workernode_map.json
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc    997514 Apr 26 17:02 agis_schedconf.cvmfs.json
[2026-04-26 22:43:20] drwx------. 5 boinc boinc      4096 Apr 26 17:02 pilot3
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc 215307182 Apr 26 22:41 HITS.49863851._000247.pool.root.1
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc       488 Apr 26 22:41 boinc_task_state.xml
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc      1013 Apr 26 22:42 memory_monitor_summary.json
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc   1509089 Apr 26 22:42 agis_ddmendpoints.agis.ALL.json
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc    460670 Apr 26 22:42 log.49863851._000247.job.log.tgz.1
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc        95 Apr 26 22:42 pilot_heartbeat.json
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc      6325 Apr 26 22:42 heartbeat_new.json
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc      6216 Apr 26 22:42 heartbeat.json
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc        28 Apr 26 22:43 wrapper_checkpoint.txt
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc      8192 Apr 26 22:43 boinc_mmap_file
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc      4884 Apr 26 22:43 pilotlog.txt
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc   1893137 Apr 26 22:43 log.49863851._000247.job.log.1
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc       357 Apr 26 22:43 output.list
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc       410 Apr 26 22:43 runtime_log
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc   2375680 Apr 26 22:43 result.tar.gz
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc      8455 Apr 26 22:43 runtime_log.err
[2026-04-26 22:43:20] -rw-------. 1 boinc boinc       656 Apr 26 22:43 176007aca18e.diag
[2026-04-26 22:43:20] -rw-r--r--. 1 boinc boinc     20645 Apr 26 22:43 stderr.txt
[2026-04-26 22:43:21] HITS file was successfully produced:
[2026-04-26 22:43:21] -rw-------. 1 boinc boinc 215307182 Apr 26 22:41 shared/HITS.pool.root.1
[2026-04-26 22:43:21]  *** Contents of shared directory: ***
[2026-04-26 22:43:21] total 470920
[2026-04-26 22:43:21] -rw-r--r--. 2 boinc boinc 263817129 Apr 26 16:55 ATLAS.root_0
[2026-04-26 22:43:21] -rw-r--r--. 2 boinc boinc    697436 Apr 26 16:55 input.tar.gz
[2026-04-26 22:43:21] -rw-r--r--. 2 boinc boinc     15667 Apr 26 16:55 start_atlas.sh
[2026-04-26 22:43:21] -rw-------. 1 boinc boinc 215307182 Apr 26 22:41 HITS.pool.root.1
[2026-04-26 22:43:21] -rw-------. 1 boinc boinc   2375680 Apr 26 22:43 result.tar.gz
22:43:22 (15392): run_atlas exited; CPU time 77716.177851
22:43:22 (15392): called boinc_finish(0)

</stderr_txt>
]]>

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