Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:02:02 (16480): wrapper (7.7.26015): starting
21:02:02 (16480): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 21:02:02] Arguments: --nthreads 8
[2026-04-26 21:02:02] Threads: 8
[2026-04-26 21:02:02] Checking for CVMFS
[2026-04-26 21:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 21:02:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 21:02:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 21:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 21:02:08] 2.11.2.0 15377 15964 101116 158900 2 53 23030213 25165825 96 130560 0 6012535 99.775 5671197 14745 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 21:02:08] CVMFS is ok
[2026-04-26 21:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 21:02:08] Checking for apptainer binary...
[2026-04-26 21:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 21:02:08] Running /usr/bin/apptainer --version
[2026-04-26 21:02:08] apptainer version 1.3.2-1.el7
[2026-04-26 21:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 21:02:43] cg-vwn467.simple-grid.lan
[2026-04-26 21:02:43] apptainer works
[2026-04-26 21:02:43] Set ATHENA_PROC_NUMBER=8
[2026-04-26 21:02:43] Set ATHENA_CORE_NUMBER=8
[2026-04-26 21:02:43] Starting ATLAS job with PandaID=7114675798
[2026-04-26 21:02:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 03:19:34]  *** The last 200 lines of the pilot log: ***
[2026-04-27 03:19:34] 2026-04-27 01:18:48,057 | INFO     | this job has now completed (state=finished)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,057 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,057 | INFO     | log transfer has been attempted: DONE
[2026-04-27 03:19:34] 2026-04-27 01:18:48,057 | INFO     | job 7114675798 has finished - writing final server update
[2026-04-27 03:19:34] 2026-04-27 01:18:48,058 | INFO     | total number of processed events: 400 (read)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,060 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7114675798/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,060 | INFO     | extracted standard info from prmon json
[2026-04-27 03:19:34] 2026-04-27 01:18:48,060 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 03:19:34] 2026-04-27 01:18:48,061 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 03:19:34] 2026-04-27 01:18:48,061 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 03:19:34] 2026-04-27 01:18:48,068 | INFO     | fitting pss+swap vs Time
[2026-04-27 03:19:34] 2026-04-27 01:18:48,068 | INFO     | sum of square deviations: 14346910860.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,072 | INFO     | sum of deviations: 73193700285.99997
[2026-04-27 03:19:34] 2026-04-27 01:18:48,073 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,073 | INFO     | mean y: 2507094.732590529
[2026-04-27 03:19:34] 2026-04-27 01:18:48,074 | INFO     | intersect: 2507094.732590529
[2026-04-27 03:19:34] 2026-04-27 01:18:48,075 | INFO     | chi2: 7.597588143230122
[2026-04-27 03:19:34] 2026-04-27 01:18:48,075 | INFO     | sum of square deviations: 13755764892.5
[2026-04-27 03:19:34] 2026-04-27 01:18:48,079 | INFO     | sum of deviations: 96778980625.99995
[2026-04-27 03:19:34] 2026-04-27 01:18:48,079 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,079 | INFO     | mean y: 2513109.418079096
[2026-04-27 03:19:34] 2026-04-27 01:18:48,080 | INFO     | intersect: 2513109.418079096
[2026-04-27 03:19:34] 2026-04-27 01:18:48,080 | INFO     | chi2: 6.875315204137211
[2026-04-27 03:19:34] 2026-04-27 01:18:48,080 | INFO     | current chi2=6.875315204137211 (change=9.506608221932865 %)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,080 | INFO     | right removable region: 353
[2026-04-27 03:19:34] 2026-04-27 01:18:48,081 | INFO     | sum of square deviations: 13755764892.5
[2026-04-27 03:19:34] 2026-04-27 01:18:48,085 | INFO     | sum of deviations: -56378271102.50001
[2026-04-27 03:19:34] 2026-04-27 01:18:48,092 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,092 | INFO     | mean y: 2540507.34180791
[2026-04-27 03:19:34] 2026-04-27 01:18:48,092 | INFO     | intersect: 2540507.34180791
[2026-04-27 03:19:34] 2026-04-27 01:18:48,093 | INFO     | chi2: 2.725245563842182
[2026-04-27 03:19:34] 2026-04-27 01:18:48,093 | INFO     | current chi2=2.725245563842182 (change=64.13012244852297 %)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,094 | INFO     | sum of square deviations: 13181084350.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,098 | INFO     | sum of deviations: -123786165217.00002
[2026-04-27 03:19:34] 2026-04-27 01:18:48,098 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,098 | INFO     | mean y: 2558326.240687679
[2026-04-27 03:19:34] 2026-04-27 01:18:48,098 | INFO     | intersect: 2558326.240687679
[2026-04-27 03:19:34] 2026-04-27 01:18:48,099 | INFO     | chi2: 1.1183203106336315
[2026-04-27 03:19:34] 2026-04-27 01:18:48,099 | INFO     | current chi2=1.1183203106336315 (change=58.96442047383906 %)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,099 | INFO     | sum of square deviations: 12622636670.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,103 | INFO     | sum of deviations: -130686045925.50005
[2026-04-27 03:19:34] 2026-04-27 01:18:48,103 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,103 | INFO     | mean y: 2560199.5145348837
[2026-04-27 03:19:34] 2026-04-27 01:18:48,103 | INFO     | intersect: 2560199.5145348837
[2026-04-27 03:19:34] 2026-04-27 01:18:48,104 | INFO     | chi2: 1.0749125570371634
[2026-04-27 03:19:34] 2026-04-27 01:18:48,104 | INFO     | current chi2=1.0749125570371634 (change=3.8815134790741306 %)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,104 | INFO     | left removable region: 15
[2026-04-27 03:19:34] 2026-04-27 01:18:48,105 | INFO     | sum of square deviations: 11973599384.5
[2026-04-27 03:19:34] 2026-04-27 01:18:48,116 | INFO     | sum of deviations: -104982528202.5
[2026-04-27 03:19:34] 2026-04-27 01:18:48,117 | INFO     | mean x (centered): 0.0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,117 | INFO     | mean y: 2567351.2869822485
[2026-04-27 03:19:34] 2026-04-27 01:18:48,117 | INFO     | intersect: 2567351.2869822485
[2026-04-27 03:19:34] 2026-04-27 01:18:48,117 | INFO     | chi2: 0.29086692354869875
[2026-04-27 03:19:34] 2026-04-27 01:18:48,118 | INFO     | current memory leak: -8.77 B/s (using 338 data points, chi2=0.29)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,118 | INFO     | could have reported an average CPU frequency of 2250 MHz (16 samples)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | ..............................
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . Timing measurements:
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . get job = 0 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . initial setup = 109 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . payload setup = 189 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . stage-in = 0 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . payload execution = 21990 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . stage-out = 6 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | . log creation = 1 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,119 | INFO     | ..............................
[2026-04-27 03:19:34] 2026-04-27 01:18:48,303 | INFO     | 
[2026-04-27 03:19:34] 2026-04-27 01:18:48,303 | INFO     | job summary report
[2026-04-27 03:19:34] 2026-04-27 01:18:48,303 | INFO     | --------------------------------------------------
[2026-04-27 03:19:34] 2026-04-27 01:18:48,303 | INFO     | PanDA job id: 7114675798
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | task id: 49863714
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | errors: (none)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | pilot state: finished 
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | transexitcode: 0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | exeerrorcode: 0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | exeerrordiag: 
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | exitcode: 0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | exitmsg: OK
[2026-04-27 03:19:34] 2026-04-27 01:18:48,304 | INFO     | cpuconsumptiontime: 84103 s
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | nevents: 400
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | neventsw: 0
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | pid: 24929
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | pgrp: 24929
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | corecount: 8
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | event service: False
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | sizes: {0: 2273957, 1: 2274642, 2: 2276471, 13: 2276471, 22183: 2310871, 22190: 2320053, 22191: 2320191}
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | --------------------------------------------------
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | 
[2026-04-27 03:19:34] 2026-04-27 01:18:48,305 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-27 03:19:34] 2026-04-27 01:18:48,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | job 7114675798 has completed (purged errors)
[2026-04-27 03:19:34] 2026-04-27 01:18:48,622 | INFO     | overall cleanup function is called
[2026-04-27 03:19:34] 2026-04-27 01:18:49,631 | INFO     | --- collectZombieJob: --- 10, [24929]
[2026-04-27 03:19:34] 2026-04-27 01:18:49,631 | INFO     | zombie collector waiting for pid 24929
[2026-04-27 03:19:34] 2026-04-27 01:18:49,631 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 03:19:34] 2026-04-27 01:18:49,632 | INFO     | collected zombie processes
[2026-04-27 03:19:34] 2026-04-27 01:18:49,632 | INFO     | will attempt to kill all subprocesses of pid=24929
[2026-04-27 03:19:34] 2026-04-27 01:18:49,694 | INFO     | process IDs to be killed: [24929] (in reverse order)
[2026-04-27 03:19:34] 2026-04-27 01:18:50,486 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 03:19:34] 2026-04-27 01:18:50,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 03:19:34] 2026-04-27 01:18:50,488 | INFO     | did not find any defunct processes belonging to 24929
[2026-04-27 03:19:34] 2026-04-27 01:18:50,489 | INFO     | did not find any defunct processes belonging to 24929
[2026-04-27 03:19:34] 2026-04-27 01:18:50,490 | INFO     | Ready for new job
[2026-04-27 03:19:34] 2026-04-27 01:18:50,491 | INFO     | ***************************************
[2026-04-27 03:19:34] 2026-04-27 01:18:50,492 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 03:19:34] 2026-04-27 01:18:50,492 | INFO     | ***************************************
[2026-04-27 03:19:34] 2026-04-27 01:18:50,492 | INFO     | 
[2026-04-27 03:19:34] 2026-04-27 01:18:50,492 | INFO     | pilot is running in a VM
[2026-04-27 03:19:34] 2026-04-27 01:18:50,493 | INFO     | architecture information:
[2026-04-27 03:19:34] 2026-04-27 01:18:50,503 | INFO     | executing command: cat /etc/os-release
[2026-04-27 03:19:34] 2026-04-27 01:18:50,772 | INFO     | cat /etc/os-release:
[2026-04-27 03:19:34] NAME="CentOS Linux"
[2026-04-27 03:19:34] VERSION="7 (Core)"
[2026-04-27 03:19:34] ID="centos"
[2026-04-27 03:19:34] ID_LIKE="rhel fedora"
[2026-04-27 03:19:34] VERSION_ID="7"
[2026-04-27 03:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 03:19:34] ANSI_COLOR="0;31"
[2026-04-27 03:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 03:19:34] HOME_URL="https://www.centos.org/"
[2026-04-27 03:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 03:19:34] 
[2026-04-27 03:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 03:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 03:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 03:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 03:19:34] 
[2026-04-27 03:19:34] 2026-04-27 01:18:50,772 | INFO     | ***************************************
[2026-04-27 03:19:34] 2026-04-27 01:18:51,275 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-27 03:19:34] 2026-04-27 01:18:51,575 | INFO     | sufficient remaining disk space (496109617152 B)
[2026-04-27 03:19:34] 2026-04-27 01:18:51,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 03:19:34] 2026-04-27 01:18:51,575 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 03:19:34] 2026-04-27 01:18:51,575 | INFO     | update_server=False
[2026-04-27 03:19:34] 2026-04-27 01:18:51,575 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 03:19:34] 2026-04-27 01:18:51,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 03:19:34] 2026-04-27 01:18:51,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 03:19:34] 2026-04-27 01:18:51,582 | INFO     | aborting loop
[2026-04-27 03:19:34] 2026-04-27 01:18:51,645 | INFO     | all job control threads have been joined
[2026-04-27 03:19:34] 2026-04-27 01:18:52,428 | INFO     | all payload control threads have been joined
[2026-04-27 03:19:34] 2026-04-27 01:18:52,581 | INFO     | [job] retrieve thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:52,587 | INFO     | [job] job monitor thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:52,624 | INFO     | all data control threads have been joined
[2026-04-27 03:19:34] 2026-04-27 01:18:52,638 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:52,651 | INFO     | [job] control thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,055 | INFO     | [job] validate thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,274 | INFO     | [data] copytool_in thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,275 | INFO     | [payload] validate_post thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 03:19:34] 2026-04-27 01:18:53,434 | INFO     | [payload] control thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,538 | INFO     | [payload] failed_post thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,583 | INFO     | [data] copytool_out thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,630 | INFO     | [data] control thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,664 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,665 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:53,710 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:54,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 03:19:34] 2026-04-27 01:18:54,325 | INFO     | [job] queue monitor thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:18:58,067 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 03:19:34] 2026-04-27 01:19:21,181 | INFO     | PID=20458 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-27 03:19:34] 2026-04-27 01:19:21,182 | INFO     | .. there are 2 such processes running
[2026-04-27 03:19:34] 2026-04-27 01:19:21,187 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 03:19:34] 2026-04-27 01:19:21,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 03:19:34] 2026-04-27 01:19:21,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 03:19:34] 2026-04-27 01:19:22,917 | INFO     | [monitor] cgroup control has ended
[2026-04-27 03:19:34] 2026-04-27 01:19:24,679 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691459368768)>', '<ExcThread(monitor, started 140691007055616)>']
[2026-04-27 03:19:34] 2026-04-27 01:19:25,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 03:19:34] 2026-04-27 01:19:25,212 | INFO     | [monitor] control thread has ended
[2026-04-27 03:19:34] 2026-04-27 01:19:29,705 | INFO     | all workflow threads have been joined
[2026-04-27 03:19:34] 2026-04-27 01:19:29,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 03:19:34] 2026-04-27 01:19:29,706 | INFO     | traces error code: 0
[2026-04-27 03:19:34] 2026-04-27 01:19:29,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 03:19:34] 2026-04-27 01:19:30,131 [wrapper] ==== pilot stdout END ====
[2026-04-27 03:19:34] 2026-04-27 01:19:30,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 03:19:34] 2026-04-27 01:19:30,298 [wrapper] pilotpid: 20458
[2026-04-27 03:19:34] 2026-04-27 01:19:30,337 [wrapper] Pilot exit status: 0
[2026-04-27 03:19:34] 2026-04-27 01:19:30,799 [wrapper] pandaids: 7114675798
[2026-04-27 03:19:34] 2026-04-27 01:19:31,924 [wrapper] cleanup supervisor_pilot   675 20459
[2026-04-27 03:19:34] 2026-04-27 01:19:31,979 [wrapper] Test setup, not cleaning
[2026-04-27 03:19:34] 2026-04-27 01:19:32,039 [wrapper] apfmon messages muted
[2026-04-27 03:19:34] 2026-04-27 01:19:32,115 [wrapper] ==== wrapper stdout END ====
[2026-04-27 03:19:34] 2026-04-27 01:19:32,167 [wrapper] ==== wrapper stderr END ====
[2026-04-27 03:19:34]  *** Error codes and diagnostics ***
[2026-04-27 03:19:34]     "exeErrorCode": 0,
[2026-04-27 03:19:34]     "pilotErrorCode": 0,
[2026-04-27 03:19:34]  *** Listing of results directory ***
[2026-04-27 03:19:35] total 483204
[2026-04-27 03:19:35] -rwx------. 1 boinc boinc     36322 Apr 26 15:47 runpilot2-wrapper.sh
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:50 queuedata.json
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc    683926 Apr 26 15:53 pilot3.tar.gz
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc       100 Apr 26 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 03:19:35] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 21:02 run_atlas
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc       105 Apr 26 21:02 job.xml
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc 263200197 Apr 26 21:02 EVNT.49863712._000049.pool.root.1
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc      6305 Apr 26 21:02 init_data.xml
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:02 start_atlas.sh
[2026-04-27 03:19:35] drwxrwx--x. 2 boinc boinc        68 Apr 26 21:02 shared
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc    697416 Apr 26 21:02 input.tar.gz
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc         0 Apr 26 21:02 boinc_lockfile
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc      2577 Apr 26 21:02 pandaJob.out
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc       413 Apr 26 21:08 workernode_map.json
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc    997530 Apr 26 21:08 agis_schedconf.cvmfs.json
[2026-04-27 03:19:35] drwx------. 5 boinc boinc      4096 Apr 26 21:08 pilot3
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc 222460091 Apr 27 03:17 HITS.49863714._001220.pool.root.1
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc       489 Apr 27 03:17 boinc_task_state.xml
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc      1012 Apr 27 03:18 memory_monitor_summary.json
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc   1509089 Apr 27 03:18 agis_ddmendpoints.agis.ALL.json
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc    472531 Apr 27 03:18 log.49863714._001220.job.log.tgz.1
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc      6344 Apr 27 03:18 heartbeat_new.json
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc      6235 Apr 27 03:18 heartbeat.json
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc        95 Apr 27 03:19 pilot_heartbeat.json
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc      8192 Apr 27 03:19 boinc_mmap_file
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc        28 Apr 27 03:19 wrapper_checkpoint.txt
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc      4883 Apr 27 03:19 pilotlog.txt
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc   2039752 Apr 27 03:19 log.49863714._001220.job.log.1
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc       357 Apr 27 03:19 output.list
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc       410 Apr 27 03:19 runtime_log
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc   2529280 Apr 27 03:19 result.tar.gz
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc      8439 Apr 27 03:19 runtime_log.err
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc       656 Apr 27 03:19 1760997ca87a.diag
[2026-04-27 03:19:35] -rw-r--r--. 1 boinc boinc     20632 Apr 27 03:19 stderr.txt
[2026-04-27 03:19:35] HITS file was successfully produced:
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc 222460091 Apr 27 03:17 shared/HITS.pool.root.1
[2026-04-27 03:19:35]  *** Contents of shared directory: ***
[2026-04-27 03:19:35] total 477452
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc 263200197 Apr 26 21:02 ATLAS.root_0
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc     15667 Apr 26 21:02 start_atlas.sh
[2026-04-27 03:19:35] -rw-r--r--. 2 boinc boinc    697416 Apr 26 21:02 input.tar.gz
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc 222460091 Apr 27 03:17 HITS.pool.root.1
[2026-04-27 03:19:35] -rw-------. 1 boinc boinc   2529280 Apr 27 03:19 result.tar.gz
03:19:36 (16480): run_atlas exited; CPU time 84308.595284
03:19:36 (16480): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN