Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:53:05 (3556606): wrapper (7.7.26015): starting
16:53:05 (3556606): wrapper: running run_atlas (--nthreads 12)
[2026-04-27 16:53:05] Arguments: --nthreads 12
[2026-04-27 16:53:05] Threads: 12
[2026-04-27 16:53:05] Checking for CVMFS
[2026-04-27 16:53:05] No cvmfs_config command found, will try listing directly
[2026-04-27 16:53:05] CVMFS is ok
[2026-04-27 16:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 16:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 16:53:05] Further information can be found at the LHC@home message board.
[2026-04-27 16:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 16:53:05] Checking for apptainer binary...
[2026-04-27 16:53:05] which: no apptainer in ((null))
[2026-04-27 16:53:05] apptainer is not installed, using version from CVMFS
[2026-04-27 16:53:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 16:53:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot168/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-27 16:53:05] apptainer works
[2026-04-27 16:53:05] Set ATHENA_PROC_NUMBER=12
[2026-04-27 16:53:05] Set ATHENA_CORE_NUMBER=12
[2026-04-27 16:53:05] Starting ATLAS job with PandaID=7114639390
[2026-04-27 16:53:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot168/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 17:32:26]  *** The last 200 lines of the pilot log: ***
[2026-04-27 17:32:26]  filesize=350878
[2026-04-27 17:32:26]  filetype=log
[2026-04-27 17:32:26]  guid=7c8ce276-533b-480f-af20-953a65c1227d
[2026-04-27 17:32:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-27 17:32:26]  is_altstaged=None
[2026-04-27 17:32:26]  is_tar=False
[2026-04-27 17:32:26]  lfn=log.49863771._000197.job.log.tgz.1
[2026-04-27 17:32:26]  mtime=0
[2026-04-27 17:32:26]  protocol_id=None
[2026-04-27 17:32:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-27 17:32:26]  replicas=None
[2026-04-27 17:32:26]  scope=mc23_13p6TeV
[2026-04-27 17:32:26]  status=None
[2026-04-27 17:32:26]  status_code=0
[2026-04-27 17:32:26]  storage_token=
[2026-04-27 17:32:26]  surl=/var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114639390/log.49863771._000197.job.log.tgz.1
[2026-04-27 17:32:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/05/log.49863771._000197.job.log.tgz.1
[2026-04-27 17:32:26]  workdir=None
[2026-04-27 17:32:26] ]
[2026-04-27 17:32:26] 2026-04-27 15:31:37,179 | INFO     | transferring file log.49863771._000197.job.log.tgz.1 from /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114639390/log.49863771._000197.job.log.tgz.1 to /var/lib/
[2026-04-27 17:32:26] 2026-04-27 15:31:37,179 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114639390/log.49863771._000197.job.log.tgz.1 /var/lib/boinc/var/slot168/slots/1/
[2026-04-27 17:32:26] 2026-04-27 15:31:37,197 | INFO     | adding to output.list: log.49863771._000197.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/59/05/log.49863771._000197.job.log.tg
[2026-04-27 17:32:26] 2026-04-27 15:31:37,197 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-27 17:32:26] 2026-04-27 15:31:37,197 | INFO     | summary of transferred files:
[2026-04-27 17:32:26] 2026-04-27 15:31:37,197 | INFO     |  -- lfn=log.49863771._000197.job.log.tgz.1, status_code=0, status=transferred
[2026-04-27 17:32:26] 2026-04-27 15:31:37,197 | INFO     | stage-out finished correctly
[2026-04-27 17:32:26] 2026-04-27 15:31:37,244 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-27 17:32:26] 2026-04-27 15:31:38,047 | INFO     | monitor loop #175: job 0:7114639390 is in state 'finished'
[2026-04-27 17:32:26] 2026-04-27 15:31:38,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-27 17:32:26] 2026-04-27 15:31:38,510 | INFO     | PID=3561128 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-27 17:32:26] 2026-04-27 15:31:38,510 | INFO     | .. there are 15 such processes running
[2026-04-27 17:32:26] 2026-04-27 15:31:39,650 | INFO     | job 7114639390 has state=finished
[2026-04-27 17:32:26] 2026-04-27 15:31:39,650 | INFO     | preparing for final server update for job 7114639390 in state='finished'
[2026-04-27 17:32:26] 2026-04-27 15:31:40,065 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,066 | INFO     | reading metadata from: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114639390/jobReport.json
[2026-04-27 17:32:26] 2026-04-27 15:31:40,067 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot168/slots/1/workernode_map.json
[2026-04-27 17:32:26] 2026-04-27 15:31:40,067 | INFO     | this job has now completed (state=finished)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,067 | INFO     | log transfer has been attempted: DONE
[2026-04-27 17:32:26] 2026-04-27 15:31:40,067 | INFO     | job 7114639390 has finished - writing final server update
[2026-04-27 17:32:26] 2026-04-27 15:31:40,068 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2028953/.job.ad'
[2026-04-27 17:32:26] 2026-04-27 15:31:40,068 | INFO     | total number of processed events: 400 (read)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,085 | INFO     | using path: /var/lib/boinc/var/slot168/slots/1/PanDA_Pilot-7114639390/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,085 | INFO     | extracted standard info from prmon json
[2026-04-27 17:32:26] 2026-04-27 15:31:40,085 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 17:32:26] 2026-04-27 15:31:40,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 17:32:26] 2026-04-27 15:31:40,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | fitting pss+swap vs Time
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | sum of square deviations: 9228080.0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | sum of deviations: 137647537.0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | mean x (centered): 0.0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | mean y: 2753806.7741935486
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | intersect: 2753806.7741935486
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | chi2: 0.0006790877158824231
[2026-04-27 17:32:26] 2026-04-27 15:31:40,086 | INFO     | current memory leak: 14.92 B/s (using 31 data points, chi2=0.00)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | could have reported an average CPU frequency of 3586 MHz (5 samples)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | ..............................
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . Timing measurements:
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . get job = 0 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . initial setup = 4 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . payload setup = 6 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . stage-in = 0 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . payload execution = 2277 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . stage-out = 0 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | . log creation = 0 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,087 | INFO     | ..............................
[2026-04-27 17:32:26] 2026-04-27 15:31:40,265 | INFO     | 
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | job summary report
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | --------------------------------------------------
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | PanDA job id: 7114639390
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | task id: 49863771
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | errors: (none)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | pilot state: finished 
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | transexitcode: 0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | exeerrorcode: 0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | exeerrordiag: 
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | exitcode: 0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | exitmsg: OK
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | cpuconsumptiontime: 24612 s
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | nevents: 400
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | neventsw: 0
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | pid: 3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | pgrp: 3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | corecount: 12
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | event service: False
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | sizes: {0: 2276176, 11: 2276176, 2287: 2301325, 2288: 2310403, 2291: 2310573}
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | --------------------------------------------------
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | 
[2026-04-27 17:32:26] 2026-04-27 15:31:40,266 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot168/slots/1
[2026-04-27 17:32:26] 2026-04-27 15:31:40,286 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,286 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,286 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | job 7114639390 has completed (purged errors)
[2026-04-27 17:32:26] 2026-04-27 15:31:40,287 | INFO     | overall cleanup function is called
[2026-04-27 17:32:26] 2026-04-27 15:31:41,294 | INFO     | --- collectZombieJob: --- 10, [3567152]
[2026-04-27 17:32:26] 2026-04-27 15:31:41,295 | INFO     | zombie collector waiting for pid 3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:41,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 17:32:26] 2026-04-27 15:31:41,295 | INFO     | collected zombie processes
[2026-04-27 17:32:26] 2026-04-27 15:31:41,295 | INFO     | will attempt to kill all subprocesses of pid=3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:41,606 | INFO     | process IDs to be killed: [3567152] (in reverse order)
[2026-04-27 17:32:26] 2026-04-27 15:31:41,762 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 17:32:26] 2026-04-27 15:31:41,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 17:32:26] 2026-04-27 15:31:41,785 | INFO     | did not find any defunct processes belonging to 3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:41,807 | INFO     | did not find any defunct processes belonging to 3567152
[2026-04-27 17:32:26] 2026-04-27 15:31:41,808 | INFO     | Ready for new job
[2026-04-27 17:32:26] 2026-04-27 15:31:41,809 | INFO     | ***************************************
[2026-04-27 17:32:26] 2026-04-27 15:31:41,809 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 17:32:26] 2026-04-27 15:31:41,809 | INFO     | ***************************************
[2026-04-27 17:32:26] 2026-04-27 15:31:41,809 | INFO     | 
[2026-04-27 17:32:26] 2026-04-27 15:31:41,815 | INFO     | architecture information:
[2026-04-27 17:32:26] 2026-04-27 15:31:41,815 | INFO     | executing command: cat /etc/os-release
[2026-04-27 17:32:26] 2026-04-27 15:31:41,832 | INFO     | cat /etc/os-release:
[2026-04-27 17:32:26] NAME="CentOS Linux"
[2026-04-27 17:32:26] VERSION="7 (Core)"
[2026-04-27 17:32:26] ID="centos"
[2026-04-27 17:32:26] ID_LIKE="rhel fedora"
[2026-04-27 17:32:26] VERSION_ID="7"
[2026-04-27 17:32:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 17:32:26] ANSI_COLOR="0;31"
[2026-04-27 17:32:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 17:32:26] HOME_URL="https://www.centos.org/"
[2026-04-27 17:32:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 17:32:26] 
[2026-04-27 17:32:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 17:32:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 17:32:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 17:32:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 17:32:26] 
[2026-04-27 17:32:26] 2026-04-27 15:31:41,832 | INFO     | ***************************************
[2026-04-27 17:32:26] 2026-04-27 15:31:42,335 | INFO     | executing command: df -mP /var/lib/boinc/var/slot168/slots/1
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | INFO     | sufficient remaining disk space (17972592640 B)
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | INFO     | update_server=False
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 17:32:26] 2026-04-27 15:31:42,353 | INFO     | aborting loop
[2026-04-27 17:32:26] 2026-04-27 15:31:42,638 | INFO     | all data control threads have been joined
[2026-04-27 17:32:26] 2026-04-27 15:31:42,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 17:32:26] 2026-04-27 15:31:42,896 | INFO     | all payload control threads have been joined
[2026-04-27 17:32:26] 2026-04-27 15:31:43,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 17:32:26] 2026-04-27 15:31:43,346 | INFO     | all job control threads have been joined
[2026-04-27 17:32:26] 2026-04-27 15:31:43,359 | INFO     | [job] retrieve thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:43,359 | INFO     | [job] job monitor thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:43,644 | INFO     | [data] control thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:43,664 | INFO     | [payload] validate_post thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:43,900 | INFO     | [payload] control thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,252 | INFO     | [payload] failed_post thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,351 | INFO     | [job] control thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,389 | INFO     | [job] validate thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,477 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,608 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,723 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,757 | INFO     | [data] copytool_out thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,769 | INFO     | [data] copytool_in thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:44,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:45,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 17:32:26] 2026-04-27 15:31:46,150 | INFO     | [job] queue monitor thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:31:47,298 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 17:32:26] 2026-04-27 15:32:13,052 | INFO     | PID=3561128 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-27 17:32:26] 2026-04-27 15:32:13,052 | INFO     | .. there are 15 such processes running
[2026-04-27 17:32:26] 2026-04-27 15:32:13,053 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 17:32:26] 2026-04-27 15:32:13,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 17:32:26] 2026-04-27 15:32:13,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 17:32:26] 2026-04-27 15:32:21,013 | INFO     | [monitor] cgroup control has ended
[2026-04-27 17:32:26] 2026-04-27 15:32:21,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23398848145216)>', '<ExcThread(monitor, started 23398603552512)>']
[2026-04-27 17:32:26] 2026-04-27 15:32:22,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 17:32:26] 2026-04-27 15:32:22,092 | INFO     | [monitor] control thread has ended
[2026-04-27 17:32:26] 2026-04-27 15:32:26,535 | INFO     | all workflow threads have been joined
[2026-04-27 17:32:26] 2026-04-27 15:32:26,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 17:32:26] 2026-04-27 15:32:26,536 | INFO     | traces error code: 0
[2026-04-27 17:32:26] 2026-04-27 15:32:26,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 17:32:26] 2026-04-27 15:32:26,651 [wrapper] ==== pilot stdout END ====
[2026-04-27 17:32:26] 2026-04-27 15:32:26,654 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 17:32:26] 2026-04-27 15:32:26,658 [wrapper] pilotpid: 3561128
[2026-04-27 17:32:26] 2026-04-27 15:32:26,660 [wrapper] Pilot exit status: 0
[2026-04-27 17:32:26] 2026-04-27 15:32:26,670 [wrapper] pandaids: 7114639390
[2026-04-27 17:32:26] 2026-04-27 15:32:26,780 [wrapper] cleanup supervisor_pilot 3763108 3561129
[2026-04-27 17:32:26] 2026-04-27 15:32:26,783 [wrapper] Test setup, not cleaning
[2026-04-27 17:32:26] 2026-04-27 15:32:26,786 [wrapper] apfmon messages muted
[2026-04-27 17:32:26] 2026-04-27 15:32:26,789 [wrapper] ==== wrapper stdout END ====
[2026-04-27 17:32:26] 2026-04-27 15:32:26,792 [wrapper] ==== wrapper stderr END ====
[2026-04-27 17:32:26]  *** Error codes and diagnostics ***
[2026-04-27 17:32:26]     "exeErrorCode": 0,
[2026-04-27 17:32:26]     "pilotErrorCode": 0,
[2026-04-27 17:32:26]  *** Listing of results directory ***
[2026-04-27 17:32:26] total 474372
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc    683926 Apr 26 14:59 pilot3.tar.gz
[2026-04-27 17:32:26] -rwx------. 1 boinc boinc     36322 Apr 26 15:43 runpilot2-wrapper.sh
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:46 queuedata.json
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc       100 Apr 27 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 17:32:26] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 16:53 run_atlas
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc       105 Apr 27 16:53 job.xml
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc 263823282 Apr 27 16:53 EVNT.49863768._000006.pool.root.1
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc     15667 Apr 27 16:53 start_atlas.sh
[2026-04-27 17:32:26] drwxrwx--x. 2 boinc boinc      4096 Apr 27 16:53 shared
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc    697412 Apr 27 16:53 input.tar.gz
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc      6630 Apr 27 16:53 init_data.xml
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc         0 Apr 27 16:53 boinc_lockfile
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc      2575 Apr 27 16:53 pandaJob.out
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc    996921 Apr 27 16:53 agis_schedconf.cvmfs.json
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc   1508585 Apr 27 16:53 agis_ddmendpoints.agis.ALL.json
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc       445 Apr 27 16:53 workernode_map.json
[2026-04-27 17:32:26] drwx------. 5 boinc boinc      4096 Apr 27 16:53 pilot3
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc 216567931 Apr 27 17:31 HITS.49863771._000197.pool.root.1
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc       486 Apr 27 17:31 boinc_task_state.xml
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc      1028 Apr 27 17:31 memory_monitor_summary.json
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc    350878 Apr 27 17:31 log.49863771._000197.job.log.tgz.1
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc      6371 Apr 27 17:31 heartbeat_new.json
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc      6262 Apr 27 17:31 heartbeat.json
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc        95 Apr 27 17:32 pilot_heartbeat.json
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc      8192 Apr 27 17:32 boinc_mmap_file
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc        26 Apr 27 17:32 wrapper_checkpoint.txt
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc      4833 Apr 27 17:32 pilotlog.txt
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc    263165 Apr 27 17:32 log.49863771._000197.job.log.1
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc       357 Apr 27 17:32 output.list
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc       410 Apr 27 17:32 runtime_log
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc    634880 Apr 27 17:32 result.tar.gz
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc      8846 Apr 27 17:32 runtime_log.err
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc       661 Apr 27 17:32 168bd61a755e.diag
[2026-04-27 17:32:26] -rw-r--r--. 1 boinc boinc     21096 Apr 27 17:32 stderr.txt
[2026-04-27 17:32:26] HITS file was successfully produced:
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc 216567931 Apr 27 17:31 shared/HITS.pool.root.1
[2026-04-27 17:32:26]  *** Contents of shared directory: ***
[2026-04-27 17:32:26] total 470464
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc 263823282 Apr 27 16:53 ATLAS.root_0
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc     15667 Apr 27 16:53 start_atlas.sh
[2026-04-27 17:32:26] -rw-r--r--. 2 boinc boinc    697412 Apr 27 16:53 input.tar.gz
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc 216567931 Apr 27 17:31 HITS.pool.root.1
[2026-04-27 17:32:26] -rw-------. 1 boinc boinc    634880 Apr 27 17:32 result.tar.gz
17:32:28 (3556606): run_atlas exited; CPU time 24679.484771
17:32:28 (3556606): called boinc_finish(0)

</stderr_txt>
]]>

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