Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:50:52 (848886): wrapper (7.7.26015): starting
14:50:52 (848886): wrapper: running run_atlas (--nthreads 4)
[2026-04-27 14:50:52] Arguments: --nthreads 4
[2026-04-27 14:50:52] Threads: 4
[2026-04-27 14:50:52] Checking for CVMFS
[2026-04-27 14:50:52] No cvmfs_config command found, will try listing directly
[2026-04-27 14:50:52] CVMFS is ok
[2026-04-27 14:50:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 14:50:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-27 14:50:52] Further information can be found at the LHC@home message board.
[2026-04-27 14:50:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 14:50:52] Checking for apptainer binary...
[2026-04-27 14:50:52] which: no apptainer in ((null))
[2026-04-27 14:50:52] apptainer is not installed, using version from CVMFS
[2026-04-27 14:50:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 14:50:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-27 14:50:52] apptainer works
[2026-04-27 14:50:52] Set ATHENA_PROC_NUMBER=4
[2026-04-27 14:50:52] Set ATHENA_CORE_NUMBER=4
[2026-04-27 14:50:52] Starting ATLAS job with PandaID=7114639489
[2026-04-27 14:50:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-27 18:22:14]  *** The last 200 lines of the pilot log: ***
[2026-04-27 18:22:14] 2026-04-27 16:20:47,662 | INFO     | using path: /var/lib/boinc/var/slot56/slots/3/PanDA_Pilot-7114639489/memory_monitor_summary.json (trf name=prmon)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,662 | INFO     | extracted standard info from prmon json
[2026-04-27 18:22:14] 2026-04-27 16:20:47,662 | INFO     | extracted standard memory fields from prmon json
[2026-04-27 18:22:14] 2026-04-27 16:20:47,663 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-27 18:22:14] 2026-04-27 16:20:47,663 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-27 18:22:14] 2026-04-27 16:20:47,665 | INFO     | fitting pss+swap vs Time
[2026-04-27 18:22:14] 2026-04-27 16:20:47,665 | INFO     | sum of square deviations: 2710627567.5
[2026-04-27 18:22:14] 2026-04-27 16:20:47,666 | INFO     | sum of deviations: 17732605816.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,666 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,666 | INFO     | mean y: 2311476.7378640776
[2026-04-27 18:22:14] 2026-04-27 16:20:47,666 | INFO     | intersect: 2311476.7378640776
[2026-04-27 18:22:14] 2026-04-27 16:20:47,667 | INFO     | chi2: 2.0250507438413035
[2026-04-27 18:22:14] 2026-04-27 16:20:47,667 | INFO     | sum of square deviations: 2518000700.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | sum of deviations: 29008649856.999996
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | mean y: 2320219.2537313434
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | intersect: 2320219.2537313434
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | chi2: 1.3556545034613285
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | current chi2=1.3556545034613285 (change=33.05577612885899 %)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,668 | INFO     | sum of square deviations: 2334722845.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,669 | INFO     | sum of deviations: 28219979667.5
[2026-04-27 18:22:14] 2026-04-27 16:20:47,669 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,669 | INFO     | mean y: 2319562.9948979593
[2026-04-27 18:22:14] 2026-04-27 16:20:47,669 | INFO     | intersect: 2319562.9948979593
[2026-04-27 18:22:14] 2026-04-27 16:20:47,670 | INFO     | chi2: 1.3562439038746756
[2026-04-27 18:22:14] 2026-04-27 16:20:47,670 | INFO     | current chi2=1.3562439038746756 (change=-0.04347718477253668 %)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,670 | INFO     | right removable region: 195
[2026-04-27 18:22:14] 2026-04-27 16:20:47,670 | INFO     | sum of square deviations: 2518000700.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | sum of deviations: -9358123887.000002
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | mean y: 2332669.3482587063
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | intersect: 2332669.3482587063
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | chi2: 0.6921391604075458
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | current chi2=0.6921391604075458 (change=65.82114485217136 %)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,671 | INFO     | sum of square deviations: 2334722845.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,672 | INFO     | sum of deviations: -10738511766.5
[2026-04-27 18:22:14] 2026-04-27 16:20:47,672 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,672 | INFO     | mean y: 2333801.4540816327
[2026-04-27 18:22:14] 2026-04-27 16:20:47,672 | INFO     | intersect: 2333801.4540816327
[2026-04-27 18:22:14] 2026-04-27 16:20:47,672 | INFO     | chi2: 0.6868920235330281
[2026-04-27 18:22:14] 2026-04-27 16:20:47,673 | INFO     | current chi2=0.6868920235330281 (change=0.7581043198636511 %)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,673 | INFO     | left removable region: 10
[2026-04-27 18:22:14] 2026-04-27 16:20:47,673 | INFO     | sum of square deviations: 1963274020.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | sum of deviations: 588746258.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | mean x (centered): 0.0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | mean y: 2343511.9513513516
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | intersect: 2343511.9513513516
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | chi2: 0.0022817759896318775
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | current memory leak: 0.30 B/s (using 185 data points, chi2=0.00)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | could have reported an average CPU frequency of 2704 MHz (10 samples)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,674 | INFO     | ..............................
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . Timing measurements:
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . get job = 0 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . initial setup = 8 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . payload setup = 15 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . stage-in = 0 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . payload execution = 12533 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . stage-out = 1 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | . log creation = 0 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,675 | INFO     | ..............................
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | 
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | job summary report
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | --------------------------------------------------
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | PanDA job id: 7114639489
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | task id: 49863733
[2026-04-27 18:22:14] 2026-04-27 16:20:47,742 | INFO     | errors: (none)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | pilot state: finished 
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | transexitcode: 0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | exeerrorcode: 0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | exeerrordiag: 
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | exitcode: 0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | exitmsg: OK
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | cpuconsumptiontime: 47561 s
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | nevents: 400
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | neventsw: 0
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | pid: 869348
[2026-04-27 18:22:14] 2026-04-27 16:20:47,743 | INFO     | pgrp: 869348
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | corecount: 4
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | event service: False
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | sizes: {0: 2274541, 1: 2276171, 11: 2276199, 12553: 2306608, 12555: 2315628, 12558: 2315684, 12561: 2316006}
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | --------------------------------------------------
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | 
[2026-04-27 18:22:14] 2026-04-27 16:20:47,744 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/3
[2026-04-27 18:22:14] 2026-04-27 16:20:47,787 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,790 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-27 18:22:14] 2026-04-27 16:20:47,790 | INFO     | job 7114639489 has completed (purged errors)
[2026-04-27 18:22:14] 2026-04-27 16:20:47,790 | INFO     | overall cleanup function is called
[2026-04-27 18:22:14] 2026-04-27 16:20:47,930 | INFO     | number of running child processes to parent process 869348: 1
[2026-04-27 18:22:14] 2026-04-27 16:20:47,931 | INFO     | maximum number of monitored processes: 6
[2026-04-27 18:22:14] 2026-04-27 16:20:47,931 | INFO     | aborting job monitoring since job object (job id=7114639489) has expired
[2026-04-27 18:22:14] 2026-04-27 16:20:48,801 | INFO     | --- collectZombieJob: --- 10, [869348]
[2026-04-27 18:22:14] 2026-04-27 16:20:48,801 | INFO     | zombie collector waiting for pid 869348
[2026-04-27 18:22:14] 2026-04-27 16:20:48,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-27 18:22:14] 2026-04-27 16:20:48,801 | INFO     | collected zombie processes
[2026-04-27 18:22:14] 2026-04-27 16:20:48,801 | INFO     | will attempt to kill all subprocesses of pid=869348
[2026-04-27 18:22:14] 2026-04-27 16:20:49,478 | INFO     | process IDs to be killed: [869348] (in reverse order)
[2026-04-27 18:22:14] 2026-04-27 16:20:49,790 | WARNING  | found no corresponding commands to process id(s)
[2026-04-27 18:22:14] 2026-04-27 16:20:49,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-27 18:22:14] 2026-04-27 16:20:49,820 | INFO     | did not find any defunct processes belonging to 869348
[2026-04-27 18:22:14] 2026-04-27 16:20:49,845 | INFO     | did not find any defunct processes belonging to 869348
[2026-04-27 18:22:14] 2026-04-27 16:20:49,845 | INFO     | Ready for new job
[2026-04-27 18:22:14] 2026-04-27 16:20:49,848 | INFO     | ***************************************
[2026-04-27 18:22:14] 2026-04-27 16:20:49,848 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-27 18:22:14] 2026-04-27 16:20:49,848 | INFO     | ***************************************
[2026-04-27 18:22:14] 2026-04-27 16:20:49,848 | INFO     | 
[2026-04-27 18:22:14] 2026-04-27 16:20:49,856 | INFO     | architecture information:
[2026-04-27 18:22:14] 2026-04-27 16:20:49,857 | INFO     | executing command: cat /etc/os-release
[2026-04-27 18:22:14] 2026-04-27 16:20:49,882 | INFO     | cat /etc/os-release:
[2026-04-27 18:22:14] NAME="CentOS Linux"
[2026-04-27 18:22:14] VERSION="7 (Core)"
[2026-04-27 18:22:14] ID="centos"
[2026-04-27 18:22:14] ID_LIKE="rhel fedora"
[2026-04-27 18:22:14] VERSION_ID="7"
[2026-04-27 18:22:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-27 18:22:14] ANSI_COLOR="0;31"
[2026-04-27 18:22:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-27 18:22:14] HOME_URL="https://www.centos.org/"
[2026-04-27 18:22:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-27 18:22:14] 
[2026-04-27 18:22:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-27 18:22:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-27 18:22:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-27 18:22:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-27 18:22:14] 
[2026-04-27 18:22:14] 2026-04-27 16:20:49,883 | INFO     | ***************************************
[2026-04-27 18:22:14] 2026-04-27 16:20:50,386 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/3
[2026-04-27 18:22:14] 2026-04-27 16:20:50,414 | INFO     | sufficient remaining disk space (21906849792 B)
[2026-04-27 18:22:14] 2026-04-27 16:20:50,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-27 18:22:14] 2026-04-27 16:20:50,415 | INFO     | current server update state: UPDATING_FINAL
[2026-04-27 18:22:14] 2026-04-27 16:20:50,415 | INFO     | update_server=False
[2026-04-27 18:22:14] 2026-04-27 16:20:50,415 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-27 18:22:14] 2026-04-27 16:20:50,415 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-27 18:22:14] 2026-04-27 16:20:50,434 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-27 18:22:14] 2026-04-27 16:20:50,434 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-27 18:22:14] 2026-04-27 16:20:50,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-27 18:22:14] 2026-04-27 16:20:50,435 | INFO     | will abort loop
[2026-04-27 18:22:14] 2026-04-27 16:20:50,671 | INFO     | all data control threads have been joined
[2026-04-27 18:22:14] 2026-04-27 16:20:50,671 | INFO     | all payload control threads have been joined
[2026-04-27 18:22:14] 2026-04-27 16:20:51,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-27 18:22:14] 2026-04-27 16:20:51,420 | INFO     | [job] retrieve thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,440 | INFO     | [job] job monitor thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,470 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,577 | INFO     | all job control threads have been joined
[2026-04-27 18:22:14] 2026-04-27 16:20:51,676 | INFO     | [data] control thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,677 | INFO     | [payload] control thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,763 | INFO     | [job] validate thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:51,792 | INFO     | [payload] validate_post thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,003 | INFO     | [payload] validate_pre thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,016 | INFO     | [job] create_data_payload thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,421 | INFO     | [data] copytool_out thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,505 | INFO     | [payload] execute_payloads thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,582 | INFO     | [job] control thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,751 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-27 18:22:14] 2026-04-27 16:20:52,785 | INFO     | [payload] failed_post thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:52,830 | INFO     | [data] copytool_in thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:53,756 | INFO     | [job] queue monitor thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:20:55,087 | INFO     | [data] queue_monitor thread has finished
[2026-04-27 18:22:14] 2026-04-27 16:21:06,926 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-04-27 18:22:14] 2026-04-27 16:21:20,155 | INFO     | PID=856415 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-27 18:22:14] 2026-04-27 16:21:20,155 | INFO     | .. there are 23 such processes running
[2026-04-27 18:22:14] 2026-04-27 16:21:20,156 | INFO     | found 0 job(s) in 20 queues
[2026-04-27 18:22:14] 2026-04-27 16:21:20,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-27 18:22:14] 2026-04-27 16:21:20,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-27 18:22:14] 2026-04-27 16:21:36,225 | INFO     | [monitor] cgroup control has ended
[2026-04-27 18:22:14] 2026-04-27 16:21:38,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23168656398144)>', '<ExcThread(monitor, started 23168418064128)>']
[2026-04-27 18:22:14] 2026-04-27 16:21:39,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-27 18:22:14] 2026-04-27 16:21:39,253 | INFO     | [monitor] control thread has ended
[2026-04-27 18:22:14] 2026-04-27 16:21:43,348 | INFO     | all workflow threads have been joined
[2026-04-27 18:22:14] 2026-04-27 16:21:43,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-27 18:22:14] 2026-04-27 16:21:43,348 | INFO     | traces error code: 0
[2026-04-27 18:22:14] 2026-04-27 16:21:43,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-27 18:22:14] 2026-04-27 16:21:43,505 [wrapper] ==== pilot stdout END ====
[2026-04-27 18:22:14] 2026-04-27 16:21:43,510 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-27 18:22:14] 2026-04-27 16:21:43,514 [wrapper] pilotpid: 856415
[2026-04-27 18:22:14] 2026-04-27 16:21:43,518 [wrapper] Pilot exit status: 0
[2026-04-27 18:22:14] 2026-04-27 16:21:43,532 [wrapper] pandaids: 7114639489
[2026-04-27 18:22:14] 2026-04-27 16:21:43,739 [wrapper] cleanup supervisor_pilot 1333080 856416
[2026-04-27 18:22:14] 2026-04-27 16:21:43,743 [wrapper] Test setup, not cleaning
[2026-04-27 18:22:14] 2026-04-27 16:21:43,747 [wrapper] apfmon messages muted
[2026-04-27 18:22:14] 2026-04-27 16:21:43,751 [wrapper] ==== wrapper stdout END ====
[2026-04-27 18:22:14] 2026-04-27 16:21:43,756 [wrapper] ==== wrapper stderr END ====
[2026-04-27 18:22:14]  *** Error codes and diagnostics ***
[2026-04-27 18:22:14]     "exeErrorCode": 0,
[2026-04-27 18:22:14]     "pilotErrorCode": 0,
[2026-04-27 18:22:14]  *** Listing of results directory ***
[2026-04-27 18:22:14] total 463980
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc    683926 Apr 26 14:59 pilot3.tar.gz
[2026-04-27 18:22:14] -rwx------. 1 boinc boinc     36322 Apr 26 15:41 runpilot2-wrapper.sh
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc      5631 Apr 26 15:44 queuedata.json
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc       100 Apr 27 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-27 18:22:14] -rwxr-xr-x. 1 boinc boinc      7986 Apr 27 14:50 run_atlas
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc       105 Apr 27 14:50 job.xml
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc 262663868 Apr 27 14:50 EVNT.49863730._000004.pool.root.1
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc      6538 Apr 27 14:50 init_data.xml
[2026-04-27 18:22:14] drwxrwx--x. 2 boinc boinc      4096 Apr 27 14:50 shared
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc    697408 Apr 27 14:50 input.tar.gz
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc     15667 Apr 27 14:50 start_atlas.sh
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc         0 Apr 27 14:50 boinc_lockfile
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc      2573 Apr 27 14:50 pandaJob.out
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc    996913 Apr 27 14:51 agis_schedconf.cvmfs.json
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc       443 Apr 27 14:51 workernode_map.json
[2026-04-27 18:22:14] drwx------. 5 boinc boinc      4096 Apr 27 14:51 pilot3
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc 205368323 Apr 27 18:20 HITS.49863733._000037.pool.root.1
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc        95 Apr 27 18:20 pilot_heartbeat.json
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc      1027 Apr 27 18:20 memory_monitor_summary.json
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc       487 Apr 27 18:20 boinc_task_state.xml
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc   1508585 Apr 27 18:20 agis_ddmendpoints.agis.ALL.json
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc    318485 Apr 27 18:20 log.49863733._000037.job.log.tgz.1
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc      6363 Apr 27 18:20 heartbeat_new.json
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc      6254 Apr 27 18:20 heartbeat.json
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc      5017 Apr 27 18:21 pilotlog.txt
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc   1158229 Apr 27 18:21 log.49863733._000037.job.log.1
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc       357 Apr 27 18:21 output.list
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc       410 Apr 27 18:21 runtime_log
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc   1495040 Apr 27 18:21 result.tar.gz
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc      8828 Apr 27 18:21 runtime_log.err
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc       667 Apr 27 18:21 1624e2b1de2c.diag
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc        27 Apr 27 18:22 wrapper_checkpoint.txt
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc      8192 Apr 27 18:22 boinc_mmap_file
[2026-04-27 18:22:14] -rw-r--r--. 1 boinc boinc     20770 Apr 27 18:22 stderr.txt
[2026-04-27 18:22:14] HITS file was successfully produced:
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc 205368323 Apr 27 18:20 shared/HITS.pool.root.1
[2026-04-27 18:22:14]  *** Contents of shared directory: ***
[2026-04-27 18:22:14] total 459232
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc 262663868 Apr 27 14:50 ATLAS.root_0
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc    697408 Apr 27 14:50 input.tar.gz
[2026-04-27 18:22:14] -rw-r--r--. 2 boinc boinc     15667 Apr 27 14:50 start_atlas.sh
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc 205368323 Apr 27 18:20 HITS.pool.root.1
[2026-04-27 18:22:14] -rw-------. 1 boinc boinc   1495040 Apr 27 18:21 result.tar.gz
18:22:15 (848886): run_atlas exited; CPU time 48295.444965
18:22:15 (848886): called boinc_finish(0)

</stderr_txt>
]]>

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