Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:19:17 (606037): wrapper (7.7.26015): starting
16:19:17 (606037): wrapper: running run_atlas (--nthreads 2)
[2026-04-27 16:19:17] Arguments: --nthreads 2
[2026-04-27 16:19:17] Threads: 2
[2026-04-27 16:19:17] Checking for CVMFS
[2026-04-27 16:19:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-27 16:19:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-27 16:19:57] Running cvmfs_config stat atlas.cern.ch
[2026-04-27 16:19:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-27 16:19:59] 2.13.3.0 572880 889 49736 158919 1 49 3648265 4096000 0 130560 0 68925 99.940 34755 186 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-27 16:19:59] CVMFS is ok
[2026-04-27 16:19:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-27 16:19:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-27 16:19:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-27 16:19:59] Further information can be found at the LHC@home message board.
[2026-04-27 16:19:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-27 16:19:59] Checking for apptainer binary...
[2026-04-27 16:19:59] apptainer is not installed, using version from CVMFS
[2026-04-27 16:19:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-27 16:20:06] zblade01.appleyard
[2026-04-27 16:20:06] apptainer works
[2026-04-27 16:20:06] Set ATHENA_PROC_NUMBER=2
[2026-04-27 16:20:06] Set ATHENA_CORE_NUMBER=2
[2026-04-27 16:20:06] Starting ATLAS job with PandaID=7114639253
[2026-04-27 16:20:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/ephemeral/home/boinc/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 12:55:07]  *** The last 200 lines of the pilot log: ***
[2026-04-28 12:55:07] 2026-04-28 03:54:28,824 | INFO     |  -- lfn=log.49863771._000060.job.log.tgz.1, status_code=0, status=transferred
[2026-04-28 12:55:07] 2026-04-28 03:54:28,825 | INFO     | stage-out finished correctly
[2026-04-28 12:55:07] 2026-04-28 03:54:31,195 | INFO     | monitor loop #5512: job 0:7114639253 is in state 'finished'
[2026-04-28 12:55:07] 2026-04-28 03:54:31,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 12:55:07] 2026-04-28 03:54:31,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-28 12:55:07] 2026-04-28 03:54:32,017 | INFO     | job 7114639253 has state=finished
[2026-04-28 12:55:07] 2026-04-28 03:54:32,018 | INFO     | preparing for final server update for job 7114639253 in state='finished'
[2026-04-28 12:55:07] 2026-04-28 03:54:32,018 | INFO     | reading metadata from: /ephemeral/home/boinc/boinc-client/slots/0/PanDA_Pilot-7114639253/jobReport.json
[2026-04-28 12:55:07] 2026-04-28 03:54:32,033 | INFO     | added worker_node to metadata from /ephemeral/home/boinc/boinc-client/slots/0/workernode_map.json
[2026-04-28 12:55:07] 2026-04-28 03:54:32,033 | INFO     | this job has now completed (state=finished)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,034 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,034 | INFO     | log transfer has been attempted: DONE
[2026-04-28 12:55:07] 2026-04-28 03:54:32,034 | INFO     | job 7114639253 has finished - writing final server update
[2026-04-28 12:55:07] 2026-04-28 03:54:32,035 | INFO     | total number of processed events: 400 (read)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,038 | INFO     | using path: /ephemeral/home/boinc/boinc-client/slots/0/PanDA_Pilot-7114639253/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,040 | INFO     | extracted standard info from prmon json
[2026-04-28 12:55:07] 2026-04-28 03:54:32,041 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 12:55:07] 2026-04-28 03:54:32,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 12:55:07] 2026-04-28 03:54:32,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 12:55:07] 2026-04-28 03:54:32,117 | INFO     | fitting pss+swap vs Time
[2026-04-28 12:55:07] 2026-04-28 03:54:32,119 | INFO     | sum of square deviations: 550694269510.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,161 | INFO     | sum of deviations: -53750405590.000015
[2026-04-28 12:55:07] 2026-04-28 03:54:32,161 | INFO     | mean x (centered): 0.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,162 | INFO     | mean y: 2304480.734104046
[2026-04-28 12:55:07] 2026-04-28 03:54:32,162 | INFO     | intersect: 2304480.734104046
[2026-04-28 12:55:07] 2026-04-28 03:54:32,164 | INFO     | chi2: 5.408213640477322
[2026-04-28 12:55:07] 2026-04-28 03:54:32,166 | INFO     | sum of square deviations: 543901239817.5
[2026-04-28 12:55:07] 2026-04-28 03:54:32,206 | INFO     | sum of deviations: 10532308403.499966
[2026-04-28 12:55:07] 2026-04-28 03:54:32,207 | INFO     | mean x (centered): 0.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,207 | INFO     | mean y: 2305918.868159204
[2026-04-28 12:55:07] 2026-04-28 03:54:32,207 | INFO     | intersect: 2305918.868159204
[2026-04-28 12:55:07] 2026-04-28 03:54:32,209 | INFO     | chi2: 4.762284316233193
[2026-04-28 12:55:07] 2026-04-28 03:54:32,210 | INFO     | current chi2=4.762284316233193 (change=11.943487576188284 %)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,210 | INFO     | right removable region: 1205
[2026-04-28 12:55:07] 2026-04-28 03:54:32,212 | INFO     | sum of square deviations: 543901239817.5
[2026-04-28 12:55:07] 2026-04-28 03:54:32,252 | INFO     | sum of deviations: -385301672551.50006
[2026-04-28 12:55:07] 2026-04-28 03:54:32,253 | INFO     | mean x (centered): 0.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,253 | INFO     | mean y: 2311920.3126036483
[2026-04-28 12:55:07] 2026-04-28 03:54:32,253 | INFO     | intersect: 2311920.3126036483
[2026-04-28 12:55:07] 2026-04-28 03:54:32,255 | INFO     | chi2: 2.1608566483698923
[2026-04-28 12:55:07] 2026-04-28 03:54:32,256 | INFO     | current chi2=2.1608566483698923 (change=60.044909613090326 %)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,257 | INFO     | sum of square deviations: 537164304200.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,297 | INFO     | sum of deviations: -485977083169.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,298 | INFO     | mean x (centered): 0.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,298 | INFO     | mean y: 2314195.1074104914
[2026-04-28 12:55:07] 2026-04-28 03:54:32,298 | INFO     | intersect: 2314195.1074104914
[2026-04-28 12:55:07] 2026-04-28 03:54:32,300 | INFO     | chi2: 1.679035837399017
[2026-04-28 12:55:07] 2026-04-28 03:54:32,301 | INFO     | current chi2=1.679035837399017 (change=22.297675846954096 %)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,301 | INFO     | left removable region: 10
[2026-04-28 12:55:07] 2026-04-28 03:54:32,303 | INFO     | sum of square deviations: 529153698190.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,342 | INFO     | sum of deviations: -420305461365.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,342 | INFO     | mean x (centered): 0.0
[2026-04-28 12:55:07] 2026-04-28 03:54:32,343 | INFO     | mean y: 2315689.059414226
[2026-04-28 12:55:07] 2026-04-28 03:54:32,343 | INFO     | intersect: 2315689.059414226
[2026-04-28 12:55:07] 2026-04-28 03:54:32,345 | INFO     | chi2: 1.0244650628150482
[2026-04-28 12:55:07] 2026-04-28 03:54:32,345 | INFO     | current memory leak: -0.79 B/s (using 1195 data points, chi2=1.02)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,347 | INFO     | could have reported an average CPU frequency of 2089 MHz (44 samples)
[2026-04-28 12:55:07] 2026-04-28 03:54:32,348 | INFO     | ..............................
[2026-04-28 12:55:07] 2026-04-28 03:54:32,348 | INFO     | . Timing measurements:
[2026-04-28 12:55:07] 2026-04-28 03:54:32,348 | INFO     | . get job = 0 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,348 | INFO     | . initial setup = 15 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | . payload setup = 33 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | . stage-in = 0 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | . payload execution = 73845 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | . stage-out = 27 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | . log creation = 1 s
[2026-04-28 12:55:07] 2026-04-28 03:54:32,349 | INFO     | ..............................
[2026-04-28 12:55:07] 2026-04-28 03:54:33,011 | INFO     | 
[2026-04-28 12:55:07] 2026-04-28 03:54:33,012 | INFO     | job summary report
[2026-04-28 12:55:07] 2026-04-28 03:54:33,012 | INFO     | --------------------------------------------------
[2026-04-28 12:55:07] 2026-04-28 03:54:33,013 | INFO     | PanDA job id: 7114639253
[2026-04-28 12:55:07] 2026-04-28 03:54:33,013 | INFO     | task id: 49863771
[2026-04-28 12:55:07] 2026-04-28 03:54:33,013 | INFO     | errors: (none)
[2026-04-28 12:55:07] 2026-04-28 03:54:33,014 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 12:55:07] 2026-04-28 03:54:33,014 | INFO     | pilot state: finished 
[2026-04-28 12:55:07] 2026-04-28 03:54:33,014 | INFO     | transexitcode: 0
[2026-04-28 12:55:07] 2026-04-28 03:54:33,014 | INFO     | exeerrorcode: 0
[2026-04-28 12:55:07] 2026-04-28 03:54:33,015 | INFO     | exeerrordiag: 
[2026-04-28 12:55:07] 2026-04-28 03:54:33,015 | INFO     | exitcode: 0
[2026-04-28 12:55:07] 2026-04-28 03:54:33,015 | INFO     | exitmsg: OK
[2026-04-28 12:55:07] 2026-04-28 03:54:33,015 | INFO     | cpuconsumptiontime: 145174 s
[2026-04-28 12:55:07] 2026-04-28 03:54:33,016 | INFO     | nevents: 400
[2026-04-28 12:55:07] 2026-04-28 03:54:33,016 | INFO     | neventsw: 0
[2026-04-28 12:55:07] 2026-04-28 03:54:33,016 | INFO     | pid: 614521
[2026-04-28 12:55:07] 2026-04-28 03:54:33,016 | INFO     | pgrp: 614521
[2026-04-28 12:55:07] 2026-04-28 03:54:33,017 | INFO     | corecount: 2
[2026-04-28 12:55:07] 2026-04-28 03:54:33,017 | INFO     | event service: False
[2026-04-28 12:55:07] 2026-04-28 03:54:33,017 | INFO     | sizes: {0: 2274616, 1: 2274700, 2: 2276529, 73882: 2335314, 73883: 2335313, 73911: 2350457, 73913: 2350641, 73914: 2350835}
[2026-04-28 12:55:07] 2026-04-28 03:54:33,017 | INFO     | --------------------------------------------------
[2026-04-28 12:55:07] 2026-04-28 03:54:33,018 | INFO     | 
[2026-04-28 12:55:07] 2026-04-28 03:54:33,018 | INFO     | executing command: ls -lF /ephemeral/home/boinc/boinc-client/slots/0
[2026-04-28 12:55:07] 2026-04-28 03:54:33,055 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,056 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,056 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,056 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,058 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,058 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,059 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 12:55:07] 2026-04-28 03:54:33,059 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,059 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 12:55:07] 2026-04-28 03:54:33,060 | INFO     | job 7114639253 has completed (purged errors)
[2026-04-28 12:55:07] 2026-04-28 03:54:33,060 | INFO     | overall cleanup function is called
[2026-04-28 12:55:07] 2026-04-28 03:54:34,066 | INFO     | --- collectZombieJob: --- 10, [614521]
[2026-04-28 12:55:07] 2026-04-28 03:54:34,067 | INFO     | zombie collector waiting for pid 614521
[2026-04-28 12:55:07] 2026-04-28 03:54:34,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 12:55:07] 2026-04-28 03:54:34,067 | INFO     | collected zombie processes
[2026-04-28 12:55:07] 2026-04-28 03:54:34,068 | INFO     | will attempt to kill all subprocesses of pid=614521
[2026-04-28 12:55:07] 2026-04-28 03:54:34,173 | INFO     | process IDs to be killed: [614521] (in reverse order)
[2026-04-28 12:55:07] 2026-04-28 03:54:34,452 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 12:55:07] 2026-04-28 03:54:34,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 12:55:07] 2026-04-28 03:54:34,457 | INFO     | did not find any defunct processes belonging to 614521
[2026-04-28 12:55:07] 2026-04-28 03:54:34,461 | INFO     | did not find any defunct processes belonging to 614521
[2026-04-28 12:55:07] 2026-04-28 03:54:34,462 | INFO     | Ready for new job
[2026-04-28 12:55:07] 2026-04-28 03:54:34,464 | INFO     | ***************************************
[2026-04-28 12:55:07] 2026-04-28 03:54:34,464 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 12:55:07] 2026-04-28 03:54:34,464 | INFO     | ***************************************
[2026-04-28 12:55:07] 2026-04-28 03:54:34,464 | INFO     | 
[2026-04-28 12:55:07] 2026-04-28 03:54:34,465 | INFO     | architecture information:
[2026-04-28 12:55:07] 2026-04-28 03:54:34,466 | INFO     | executing command: cat /etc/os-release
[2026-04-28 12:55:07] 2026-04-28 03:54:34,576 | INFO     | cat /etc/os-release:
[2026-04-28 12:55:07] NAME="CentOS Linux"
[2026-04-28 12:55:07] VERSION="7 (Core)"
[2026-04-28 12:55:07] ID="centos"
[2026-04-28 12:55:07] ID_LIKE="rhel fedora"
[2026-04-28 12:55:07] VERSION_ID="7"
[2026-04-28 12:55:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 12:55:07] ANSI_COLOR="0;31"
[2026-04-28 12:55:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 12:55:07] HOME_URL="https://www.centos.org/"
[2026-04-28 12:55:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 12:55:07] 
[2026-04-28 12:55:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 12:55:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 12:55:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 12:55:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 12:55:07] 
[2026-04-28 12:55:07] 2026-04-28 03:54:34,577 | INFO     | ***************************************
[2026-04-28 12:55:07] 2026-04-28 03:54:35,080 | INFO     | executing command: df -mP /ephemeral/home/boinc/boinc-client/slots/0
[2026-04-28 12:55:07] 2026-04-28 03:54:35,106 | INFO     | sufficient remaining disk space (228801380352 B)
[2026-04-28 12:55:07] 2026-04-28 03:54:35,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 12:55:07] 2026-04-28 03:54:35,107 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 12:55:07] 2026-04-28 03:54:35,107 | INFO     | update_server=False
[2026-04-28 12:55:07] 2026-04-28 03:54:35,107 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 12:55:07] 2026-04-28 03:54:35,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 12:55:07] 2026-04-28 03:54:35,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:55:07] 2026-04-28 03:54:35,109 | INFO     | aborting loop
[2026-04-28 12:55:07] 2026-04-28 03:54:35,322 | INFO     | all payload control threads have been joined
[2026-04-28 12:55:07] 2026-04-28 03:54:35,990 | INFO     | all data control threads have been joined
[2026-04-28 12:55:07] 2026-04-28 03:54:36,030 | INFO     | all job control threads have been joined
[2026-04-28 12:55:07] 2026-04-28 03:54:36,059 | INFO     | [monitor] cgroup control has ended
[2026-04-28 12:55:07] 2026-04-28 03:54:36,113 | INFO     | [job] retrieve thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,115 | INFO     | [job] job monitor thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,247 | INFO     | [job] validate thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,327 | INFO     | [payload] control thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,430 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,431 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,431 | INFO     | [data] copytool_in thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,661 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:36,996 | INFO     | [data] control thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:37,030 | INFO     | [payload] validate_post thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:37,035 | INFO     | [job] control thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:37,111 | INFO     | [data] copytool_out thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:37,417 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 12:55:07] 2026-04-28 03:54:37,524 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 12:55:07] 2026-04-28 03:54:37,603 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:37,695 | INFO     | [payload] failed_post thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:38,530 | INFO     | [job] queue monitor thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:41,423 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 12:55:07] 2026-04-28 03:54:43,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213683488576)>', '<ExcThread(monitor, started 140212621534976)>']
[2026-04-28 12:55:07] 2026-04-28 03:54:48,388 | INFO     | all workflow threads have been joined
[2026-04-28 12:55:07] 2026-04-28 03:54:48,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 12:55:07] 2026-04-28 03:54:48,389 | INFO     | traces error code: 0
[2026-04-28 12:55:07] 2026-04-28 03:54:48,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 12:55:07] 2026-04-28 03:55:05,357 | INFO     | PID=610122 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-28 12:55:07] 2026-04-28 03:55:05,360 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 12:55:07] 2026-04-28 03:55:05,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 12:55:07] 2026-04-28 03:55:05,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 12:55:07] 2026-04-28 03:55:05,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 12:55:07] 2026-04-28 03:55:05,361 | INFO     | [monitor] control thread has ended
[2026-04-28 12:55:07] 2026-04-28 03:55:05,927 [wrapper] ==== pilot stdout END ====
[2026-04-28 12:55:07] 2026-04-28 03:55:05,932 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 12:55:07] 2026-04-28 03:55:05,936 [wrapper] pilotpid: 610122
[2026-04-28 12:55:07] 2026-04-28 03:55:05,940 [wrapper] Pilot exit status: 0
[2026-04-28 12:55:07] 2026-04-28 03:55:06,276 [wrapper] pandaids: 7114639253
[2026-04-28 12:55:07] 2026-04-28 03:55:06,319 [wrapper] cleanup supervisor_pilot  647597 610123
[2026-04-28 12:55:07] 2026-04-28 03:55:06,324 [wrapper] Test setup, not cleaning
[2026-04-28 12:55:07] 2026-04-28 03:55:06,329 [wrapper] apfmon messages muted
[2026-04-28 12:55:07] 2026-04-28 03:55:06,333 [wrapper] ==== wrapper stdout END ====
[2026-04-28 12:55:07] 2026-04-28 03:55:06,338 [wrapper] ==== wrapper stderr END ====
[2026-04-28 12:55:07]  *** Error codes and diagnostics ***
[2026-04-28 12:55:07]     "exeErrorCode": 0,
[2026-04-28 12:55:07]     "pilotErrorCode": 0,
[2026-04-28 12:55:07]  *** Listing of results directory ***
[2026-04-28 12:55:07] total 477461
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc    683926 Apr 26 21:59 pilot3.tar.gz
[2026-04-28 12:55:07] -rwx------ 1 boinc boinc     36322 Apr 26 22:03 runpilot2-wrapper.sh
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc      5631 Apr 26 22:05 queuedata.json
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc       100 Apr 27 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 12:55:07] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 16:19 run_atlas
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc       105 Apr 27 16:19 job.xml
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc      6682 Apr 27 16:19 init_data.xml
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc 265103982 Apr 27 16:19 EVNT.49863768._000001.pool.root.1
[2026-04-28 12:55:07] drwxrwx--x 2 boinc boinc         5 Apr 27 16:19 shared
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc    697410 Apr 27 16:19 input.tar.gz
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc     15667 Apr 27 16:19 start_atlas.sh
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc         0 Apr 27 16:19 boinc_lockfile
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc      2571 Apr 27 16:20 pandaJob.out
[2026-04-28 12:55:07] -rw------- 1 boinc boinc    996855 Apr 27 16:22 agis_schedconf.cvmfs.json
[2026-04-28 12:55:07] -rw------- 1 boinc boinc       429 Apr 27 16:22 workernode_map.json
[2026-04-28 12:55:07] drwx------ 5 boinc boinc        26 Apr 27 16:22 pilot3
[2026-04-28 12:55:07] -rw------- 1 boinc boinc 219394533 Apr 28 12:52 HITS.49863771._000060.pool.root.1
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc       489 Apr 28 12:52 boinc_task_state.xml
[2026-04-28 12:55:07] -rw------- 1 boinc boinc      1026 Apr 28 12:53 memory_monitor_summary.json
[2026-04-28 12:55:07] -rw------- 1 boinc boinc   1512704 Apr 28 12:54 agis_ddmendpoints.agis.ALL.json
[2026-04-28 12:55:07] -rw------- 1 boinc boinc    807661 Apr 28 12:54 log.49863771._000060.job.log.tgz.1
[2026-04-28 12:55:07] -rw------- 1 boinc boinc      6366 Apr 28 12:54 heartbeat_new.json
[2026-04-28 12:55:07] -rw------- 1 boinc boinc      6257 Apr 28 12:54 heartbeat.json
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc      8192 Apr 28 12:55 boinc_mmap_file
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc        29 Apr 28 12:55 wrapper_checkpoint.txt
[2026-04-28 12:55:07] -rw------- 1 boinc boinc       746 Apr 28 12:55 pilotlog.txt
[2026-04-28 12:55:07] -rw------- 1 boinc boinc        95 Apr 28 12:55 pilot_heartbeat.json
[2026-04-28 12:55:07] -rw------- 1 boinc boinc   6630382 Apr 28 12:55 log.49863771._000060.job.log.1
[2026-04-28 12:55:07] -rw------- 1 boinc boinc       357 Apr 28 12:55 output.list
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc       410 Apr 28 12:55 runtime_log
[2026-04-28 12:55:07] -rw------- 1 boinc boinc   7454720 Apr 28 12:55 result.tar.gz
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc      8775 Apr 28 12:55 runtime_log.err
[2026-04-28 12:55:07] -rw------- 1 boinc boinc       669 Apr 28 12:55 0d0cb44adcb3.diag
[2026-04-28 12:55:07] -rw-r--r-- 1 boinc boinc     21456 Apr 28 12:55 stderr.txt
[2026-04-28 12:55:07] HITS file was successfully produced:
[2026-04-28 12:55:07] -rw------- 1 boinc boinc 219394533 Apr 28 12:52 shared/HITS.pool.root.1
[2026-04-28 12:55:07]  *** Contents of shared directory: ***
[2026-04-28 12:55:07] total 475239
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc 265103982 Apr 27 16:19 ATLAS.root_0
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc    697410 Apr 27 16:19 input.tar.gz
[2026-04-28 12:55:07] -rw-r--r-- 2 boinc boinc     15667 Apr 27 16:19 start_atlas.sh
[2026-04-28 12:55:07] -rw------- 1 boinc boinc 219394533 Apr 28 12:52 HITS.pool.root.1
[2026-04-28 12:55:07] -rw------- 1 boinc boinc   7454720 Apr 28 12:55 result.tar.gz
12:55:09 (606037): run_atlas exited; CPU time 147384.771662
12:55:09 (606037): called boinc_finish(0)

</stderr_txt>
]]>

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