Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:03:59 (2512158): wrapper (7.7.26015): starting
22:03:59 (2512158): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 22:03:59] Arguments: --nthreads 8
[2026-04-26 22:03:59] Threads: 8
[2026-04-26 22:03:59] Checking for CVMFS
[2026-04-26 22:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 22:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 22:04:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 22:04:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 22:04:02] 2.13.3.0 7410 248260 727972 158909 1 164 19186736 25181185 20091 16776704 0 1145225334 99.568 1296797546 28212 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-26 22:04:02] CVMFS is ok
[2026-04-26 22:04:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-26 22:04:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-26 22:04:02] Further information can be found at the LHC@home message board.
[2026-04-26 22:04:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 22:04:02] Checking for apptainer binary...
[2026-04-26 22:04:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 22:04:02] Running /usr/bin/apptainer --version
[2026-04-26 22:04:03] apptainer version 1.4.5-2.el9
[2026-04-26 22:04:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 22:04:04] c-16-37.aglt2.org
[2026-04-26 22:04:04] apptainer works
[2026-04-26 22:04:04] Set ATHENA_PROC_NUMBER=8
[2026-04-26 22:04:04] Set ATHENA_CORE_NUMBER=8
[2026-04-26 22:04:04] Starting ATLAS job with PandaID=7114620997
[2026-04-26 22:04:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-28 01:10:56]  *** The last 200 lines of the pilot log: ***
[2026-04-28 01:10:56] 2026-04-28 05:06:49,007 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7114620997/memory_monitor_summary.json (trf name=prmon)
[2026-04-28 01:10:56] 2026-04-28 05:06:49,008 | INFO     | extracted standard info from prmon json
[2026-04-28 01:10:56] 2026-04-28 05:06:49,008 | INFO     | extracted standard memory fields from prmon json
[2026-04-28 01:10:56] 2026-04-28 05:06:49,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-28 01:10:56] 2026-04-28 05:06:49,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-28 01:10:56] 2026-04-28 05:06:49,231 | INFO     | fitting pss+swap vs Time
[2026-04-28 01:10:56] 2026-04-28 05:06:49,255 | INFO     | sum of square deviations: 1248772632562.8596
[2026-04-28 01:10:56] 2026-04-28 05:06:49,442 | INFO     | monitor loop #3873: job 0:7114620997 is in state 'finished'
[2026-04-28 01:10:56] 2026-04-28 05:06:49,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 01:10:56] 2026-04-28 05:06:49,743 | INFO     | sum of deviations: 780460245931.2734
[2026-04-28 01:10:56] 2026-04-28 05:06:49,743 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:49,745 | INFO     | mean y: 2502936.491514771
[2026-04-28 01:10:56] 2026-04-28 05:06:49,745 | INFO     | intersect: 2502936.491514771
[2026-04-28 01:10:56] 2026-04-28 05:06:49,747 | INFO     | chi2: 5.9965906733207675
[2026-04-28 01:10:56] 2026-04-28 05:06:49,785 | INFO     | sum of square deviations: 1237036736744.816
[2026-04-28 01:10:56] 2026-04-28 05:06:51,398 | INFO     | sum of deviations: 882413902638.2975
[2026-04-28 01:10:56] 2026-04-28 05:06:51,399 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:51,399 | INFO     | mean y: 2504257.7534678434
[2026-04-28 01:10:56] 2026-04-28 05:06:51,399 | INFO     | intersect: 2504257.7534678434
[2026-04-28 01:10:56] 2026-04-28 05:06:51,405 | INFO     | chi2: 5.217352825810787
[2026-04-28 01:10:56] 2026-04-28 05:06:51,406 | INFO     | current chi2=5.217352825810787 (change=12.994681310779837 %)
[2026-04-28 01:10:56] 2026-04-28 05:06:51,406 | INFO     | right removable region: 1585
[2026-04-28 01:10:56] 2026-04-28 05:06:51,408 | INFO     | sum of square deviations: 1237035019954.1218
[2026-04-28 01:10:56] 2026-04-28 05:06:52,373 | INFO     | monitor loop #3874: job 0:7114620997 is in state 'finished'
[2026-04-28 01:10:56] 2026-04-28 05:06:52,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-28 01:10:56] 2026-04-28 05:06:52,511 | INFO     | sum of deviations: 286838782815.47314
[2026-04-28 01:10:56] 2026-04-28 05:06:52,516 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:52,516 | INFO     | mean y: 2509348.0416141236
[2026-04-28 01:10:56] 2026-04-28 05:06:52,516 | INFO     | intersect: 2509348.0416141236
[2026-04-28 01:10:56] 2026-04-28 05:06:52,524 | INFO     | chi2: 2.5292907300718426
[2026-04-28 01:10:56] 2026-04-28 05:06:52,524 | INFO     | current chi2=2.5292907300718426 (change=57.82118760707103 %)
[2026-04-28 01:10:56] 2026-04-28 05:06:52,558 | INFO     | sum of square deviations: 1225371272675.6223
[2026-04-28 01:10:56] 2026-04-28 05:06:53,742 | INFO     | sum of deviations: -10857834906.574799
[2026-04-28 01:10:56] 2026-04-28 05:06:53,743 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:53,743 | INFO     | mean y: 2513238.98798229
[2026-04-28 01:10:56] 2026-04-28 05:06:53,743 | INFO     | intersect: 2513238.98798229
[2026-04-28 01:10:56] 2026-04-28 05:06:53,746 | INFO     | chi2: 1.264781248685662
[2026-04-28 01:10:56] 2026-04-28 05:06:53,747 | INFO     | current chi2=1.264781248685662 (change=49.99462759863367 %)
[2026-04-28 01:10:56] 2026-04-28 05:06:53,749 | INFO     | sum of square deviations: 1213781351358.6367
[2026-04-28 01:10:56] 2026-04-28 05:06:54,014 | INFO     | sum of deviations: -141716277576.09384
[2026-04-28 01:10:56] 2026-04-28 05:06:54,014 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:54,014 | INFO     | mean y: 2514960.86928934
[2026-04-28 01:10:56] 2026-04-28 05:06:54,015 | INFO     | intersect: 2514960.86928934
[2026-04-28 01:10:56] 2026-04-28 05:06:54,023 | INFO     | chi2: 1.0292296854783298
[2026-04-28 01:10:56] 2026-04-28 05:06:54,024 | INFO     | current chi2=1.0292296854783298 (change=18.62389748836909 %)
[2026-04-28 01:10:56] 2026-04-28 05:06:54,024 | INFO     | left removable region: 15
[2026-04-28 01:10:56] 2026-04-28 05:06:54,026 | INFO     | sum of square deviations: 1199971840689.5583
[2026-04-28 01:10:56] 2026-04-28 05:06:54,745 | INFO     | sum of deviations: -38349932549.32735
[2026-04-28 01:10:56] 2026-04-28 05:06:54,745 | INFO     | mean x (centered): 0.0
[2026-04-28 01:10:56] 2026-04-28 05:06:54,746 | INFO     | mean y: 2516326.1248407643
[2026-04-28 01:10:56] 2026-04-28 05:06:54,746 | INFO     | intersect: 2516326.1248407643
[2026-04-28 01:10:56] 2026-04-28 05:06:54,749 | INFO     | chi2: 0.24078220787249555
[2026-04-28 01:10:56] 2026-04-28 05:06:54,749 | INFO     | current memory leak: -0.03 B/s (using 1570 data points, chi2=0.24)
[2026-04-28 01:10:56] 2026-04-28 05:06:54,751 | INFO     | could have reported an average CPU frequency of 2656 MHz (57 samples)
[2026-04-28 01:10:56] 2026-04-28 05:06:54,751 | INFO     | ..............................
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . Timing measurements:
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . get job = 1 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . initial setup = 63 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . payload setup = 90 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . stage-in = 0 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,752 | INFO     | . payload execution = 97050 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,753 | INFO     | . stage-out = 11 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,753 | INFO     | . log creation = 1 s
[2026-04-28 01:10:56] 2026-04-28 05:06:54,753 | INFO     | ..............................
[2026-04-28 01:10:56] 2026-04-28 05:06:55,683 | INFO     | 
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | job summary report
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | --------------------------------------------------
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | PanDA job id: 7114620997
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | task id: 49889146
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | errors: (none)
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | pilot state: finished 
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | transexitcode: 0
[2026-04-28 01:10:56] 2026-04-28 05:06:55,684 | INFO     | exeerrorcode: 0
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | exeerrordiag: 
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | exitcode: 0
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | exitmsg: OK
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | cpuconsumptiontime: 60522 s
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | nevents: 400
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | neventsw: 0
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | pid: 2528078
[2026-04-28 01:10:56] 2026-04-28 05:06:55,685 | INFO     | pgrp: 2528078
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | corecount: 8
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | event service: False
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | sizes: {0: 2274021, 1: 2274622, 2: 2274706, 3: 2274734, 4: 2274762, 5: 2275163, 6: 2276775, 17: 2276803, 97148: 2341178, 97149: 2341177, 97162: 2356281, 97163: 235
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | --------------------------------------------------
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | 
[2026-04-28 01:10:56] 2026-04-28 05:06:55,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-28 01:10:56] 2026-04-28 05:06:56,122 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,122 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,122 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,122 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-28 01:10:56] 2026-04-28 05:06:56,124 | INFO     | job 7114620997 has completed (purged errors)
[2026-04-28 01:10:56] 2026-04-28 05:06:56,125 | INFO     | overall cleanup function is called
[2026-04-28 01:10:56] 2026-04-28 05:06:57,194 | INFO     | --- collectZombieJob: --- 10, [2528078]
[2026-04-28 01:10:56] 2026-04-28 05:06:57,194 | INFO     | zombie collector waiting for pid 2528078
[2026-04-28 01:10:56] 2026-04-28 05:06:57,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-28 01:10:56] 2026-04-28 05:06:57,194 | INFO     | collected zombie processes
[2026-04-28 01:10:56] 2026-04-28 05:06:57,194 | INFO     | will attempt to kill all subprocesses of pid=2528078
[2026-04-28 01:10:56] 2026-04-28 05:06:58,806 | INFO     | PID=2519582 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-28 01:10:56] 2026-04-28 05:06:58,806 | INFO     | .. there are 46 such processes running
[2026-04-28 01:10:56] 2026-04-28 05:06:59,962 | INFO     | process IDs to be killed: [2528078] (in reverse order)
[2026-04-28 01:10:56] 2026-04-28 05:07:00,144 | WARNING  | found no corresponding commands to process id(s)
[2026-04-28 01:10:56] 2026-04-28 05:07:00,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-28 01:10:56] 2026-04-28 05:07:00,398 | INFO     | did not find any defunct processes belonging to 2528078
[2026-04-28 01:10:56] 2026-04-28 05:07:01,000 | INFO     | did not find any defunct processes belonging to 2528078
[2026-04-28 01:10:56] 2026-04-28 05:07:01,000 | INFO     | Ready for new job
[2026-04-28 01:10:56] 2026-04-28 05:07:01,273 | INFO     | ***************************************
[2026-04-28 01:10:56] 2026-04-28 05:07:01,274 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-28 01:10:56] 2026-04-28 05:07:01,274 | INFO     | ***************************************
[2026-04-28 01:10:56] 2026-04-28 05:07:01,274 | INFO     | 
[2026-04-28 01:10:56] 2026-04-28 05:07:01,401 | INFO     | architecture information:
[2026-04-28 01:10:56] 2026-04-28 05:07:01,452 | INFO     | executing command: cat /etc/os-release
[2026-04-28 01:10:56] 2026-04-28 05:07:01,551 | INFO     | cat /etc/os-release:
[2026-04-28 01:10:56] NAME="CentOS Linux"
[2026-04-28 01:10:56] VERSION="7 (Core)"
[2026-04-28 01:10:56] ID="centos"
[2026-04-28 01:10:56] ID_LIKE="rhel fedora"
[2026-04-28 01:10:56] VERSION_ID="7"
[2026-04-28 01:10:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-28 01:10:56] ANSI_COLOR="0;31"
[2026-04-28 01:10:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-28 01:10:56] HOME_URL="https://www.centos.org/"
[2026-04-28 01:10:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-28 01:10:56] 
[2026-04-28 01:10:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-28 01:10:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-28 01:10:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-28 01:10:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-28 01:10:56] 
[2026-04-28 01:10:56] 2026-04-28 05:07:01,552 | INFO     | ***************************************
[2026-04-28 01:10:56] 2026-04-28 05:07:02,056 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-28 01:10:56] 2026-04-28 05:07:02,255 | INFO     | sufficient remaining disk space (47387246592 B)
[2026-04-28 01:10:56] 2026-04-28 05:07:02,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-28 01:10:56] 2026-04-28 05:07:02,256 | INFO     | current server update state: UPDATING_FINAL
[2026-04-28 01:10:56] 2026-04-28 05:07:02,256 | INFO     | update_server=False
[2026-04-28 01:10:56] 2026-04-28 05:07:02,256 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-28 01:10:56] 2026-04-28 05:07:02,281 | INFO     | all payload control threads have been joined
[2026-04-28 01:10:56] 2026-04-28 05:07:02,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-28 01:10:56] 2026-04-28 05:07:02,412 | INFO     | aborting loop
[2026-04-28 01:10:56] 2026-04-28 05:07:02,637 | INFO     | all data control threads have been joined
[2026-04-28 01:10:56] 2026-04-28 05:07:02,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-28 01:10:56] 2026-04-28 05:07:03,262 | INFO     | [job] retrieve thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,320 | INFO     | [payload] control thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,340 | INFO     | all job control threads have been joined
[2026-04-28 01:10:56] 2026-04-28 05:07:03,419 | INFO     | [job] job monitor thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,457 | INFO     | [job] validate thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,458 | INFO     | [payload] validate_pre thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-28 01:10:56] 2026-04-28 05:07:03,542 | INFO     | [payload] validate_post thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,598 | INFO     | [payload] failed_post thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,644 | INFO     | [data] control thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,809 | INFO     | [data] copytool_in thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:03,922 | INFO     | [payload] execute_payloads thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:04,357 | INFO     | [job] control thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:04,533 | INFO     | [job] create_data_payload thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:04,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-28 01:10:56] 2026-04-28 05:07:05,472 | INFO     | [data] copytool_out thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:05,807 | INFO     | [job] queue monitor thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:06,945 | INFO     | [data] queue_monitor thread has finished
[2026-04-28 01:10:56] 2026-04-28 05:07:10,116 | INFO     | [monitor] cgroup control has ended
[2026-04-28 01:10:56] 2026-04-28 05:07:12,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695281796928)>', '<ExcThread(monitor, started 140694136026880)>']
[2026-04-28 01:10:56] 2026-04-28 05:07:17,033 | INFO     | all workflow threads have been joined
[2026-04-28 01:10:56] 2026-04-28 05:07:17,034 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-28 01:10:56] 2026-04-28 05:07:17,034 | INFO     | traces error code: 0
[2026-04-28 01:10:56] 2026-04-28 05:07:17,034 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-28 01:10:56] 2026-04-28 05:07:36,403 | INFO     | PID=2519582 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-28 01:10:56] 2026-04-28 05:07:36,403 | INFO     | .. there are 46 such processes running
[2026-04-28 01:10:56] 2026-04-28 05:07:36,406 | INFO     | found 0 job(s) in 20 queues
[2026-04-28 01:10:56] 2026-04-28 05:07:36,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-28 01:10:56] 2026-04-28 05:07:36,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-28 01:10:56] 2026-04-28 05:07:36,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-28 01:10:56] 2026-04-28 05:07:36,406 | INFO     | [monitor] control thread has ended
[2026-04-28 01:10:56] 2026-04-28 05:07:37,658 [wrapper] ==== pilot stdout END ====
[2026-04-28 01:10:56] 2026-04-28 05:07:37,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-28 01:10:56] 2026-04-28 05:07:37,738 [wrapper] pilotpid: 2519582
[2026-04-28 01:10:56] 2026-04-28 05:07:37,756 [wrapper] Pilot exit status: 0
[2026-04-28 01:10:56] 2026-04-28 05:07:37,964 [wrapper] pandaids: 7114620997
[2026-04-28 01:10:56] 2026-04-28 05:07:38,906 [wrapper] cleanup supervisor_pilot  635534 2519583
[2026-04-28 01:10:56] 2026-04-28 05:07:38,938 [wrapper] Test setup, not cleaning
[2026-04-28 01:10:56] 2026-04-28 05:07:38,964 [wrapper] apfmon messages muted
[2026-04-28 01:10:56] 2026-04-28 05:07:38,979 [wrapper] ==== wrapper stdout END ====
[2026-04-28 01:10:56] 2026-04-28 05:07:38,996 [wrapper] ==== wrapper stderr END ====
[2026-04-28 01:10:56]  *** Error codes and diagnostics ***
[2026-04-28 01:10:56]     "exeErrorCode": 0,
[2026-04-28 01:10:56]     "pilotErrorCode": 0,
[2026-04-28 01:10:56]  *** Listing of results directory ***
[2026-04-28 01:10:56] total 574256
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas    683926 Apr 26 08:59 pilot3.tar.gz
[2026-04-28 01:10:56] -rwx------. 1 boincer umatlas     36322 Apr 26 09:03 runpilot2-wrapper.sh
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas      5631 Apr 26 09:05 queuedata.json
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas       100 Apr 26 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-28 01:10:56] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 26 22:03 run_atlas
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas       105 Apr 26 22:03 job.xml
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas 412348734 Apr 26 22:03 EVNT.49889142._000001.pool.root.1
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas     15667 Apr 26 22:03 start_atlas.sh
[2026-04-28 01:10:56] drwxrwx--x. 2 boincer umatlas      4096 Apr 26 22:03 shared
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas    697412 Apr 26 22:03 input.tar.gz
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas         0 Apr 26 22:03 boinc_lockfile
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas      2589 Apr 26 22:04 pandaJob.out
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas        57 Apr 26 22:04 setup.sh.local
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas       435 Apr 26 22:06 workernode_map.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas    997530 Apr 26 22:07 agis_schedconf.cvmfs.json
[2026-04-28 01:10:56] drwx------. 5 boincer umatlas      4096 Apr 26 22:07 pilot3
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas 157992495 Apr 28 01:05 HITS.49889146._000028.pool.root.1
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas       489 Apr 28 01:05 boinc_task_state.xml
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas      1045 Apr 28 01:06 memory_monitor_summary.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas   1512704 Apr 28 01:06 agis_ddmendpoints.agis.ALL.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas    957301 Apr 28 01:06 log.49889146._000028.job.log.tgz.1
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas      6402 Apr 28 01:06 heartbeat_new.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas      6293 Apr 28 01:06 heartbeat.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas        95 Apr 28 01:07 pilot_heartbeat.json
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas       823 Apr 28 01:07 pilotlog.txt
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas   5822526 Apr 28 01:07 log.49889146._000028.job.log.1
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas       357 Apr 28 01:07 output.list
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas       410 Apr 28 01:07 runtime_log
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas   6799360 Apr 28 01:07 result.tar.gz
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas      8960 Apr 28 01:07 runtime_log.err
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas       657 Apr 28 01:07 0d20445f96a8.diag
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas      6530 Apr 28 01:10 init_data.xml
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas        28 Apr 28 01:10 wrapper_checkpoint.txt
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas      8192 Apr 28 01:10 boinc_mmap_file
[2026-04-28 01:10:56] -rw-r--r--. 1 boincer umatlas     21253 Apr 28 01:10 stderr.txt
[2026-04-28 01:10:56] HITS file was successfully produced:
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas 157992495 Apr 28 01:05 shared/HITS.pool.root.1
[2026-04-28 01:10:56]  *** Contents of shared directory: ***
[2026-04-28 01:10:56] total 564324
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas 412348734 Apr 26 22:03 ATLAS.root_0
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas     15667 Apr 26 22:03 start_atlas.sh
[2026-04-28 01:10:56] -rw-r--r--. 2 boincer umatlas    697412 Apr 26 22:03 input.tar.gz
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas 157992495 Apr 28 01:05 HITS.pool.root.1
[2026-04-28 01:10:56] -rw-------. 1 boincer umatlas   6799360 Apr 28 01:07 result.tar.gz
01:10:58 (2512158): run_atlas exited; CPU time 64670.889232
01:10:58 (2512158): called boinc_finish(0)

</stderr_txt>
]]>

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