Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 02:33:23 (20948): vboxwrapper version 26210
2026-04-27 02:33:23 (20948): BOINC client version: 8.2.9
2026-04-27 02:33:24 (20948): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-04-27 02:33:24 (20948): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 02:33:24 (20948): Create VM. (boinc_acac4f67ddb42625, slot#1)
2026-04-27 02:33:25 (20948): Setting Memory Size for VM. (6600MB)
2026-04-27 02:33:25 (20948): Setting CPU Count for VM. (4)
2026-04-27 02:33:25 (20948): Setting Chipset Options for VM.
2026-04-27 02:33:26 (20948): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 02:33:26 (20948): Setting Boot Options for VM.
2026-04-27 02:33:26 (20948): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 02:33:27 (20948): Enabling VM Network Access.
2026-04-27 02:33:27 (20948): Disabling USB Support for VM.
2026-04-27 02:33:27 (20948): Disabling COM Port Support for VM.
2026-04-27 02:33:27 (20948): Disabling LPT Port Support for VM.
2026-04-27 02:33:28 (20948): Disabling Audio Support for VM.
2026-04-27 02:33:28 (20948): Disabling Clipboard Support for VM.
2026-04-27 02:33:28 (20948): Disabling Drag and Drop Support for VM.
2026-04-27 02:33:28 (20948): Adding storage controller(s) to VM.
2026-04-27 02:33:29 (20948): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 02:33:29 (20948): Adding VirtualBox Guest Additions to VM.
2026-04-27 02:33:29 (20948): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 02:33:30 (20948): forwarding host port 54035 to guest port 80
2026-04-27 02:33:30 (20948): Enabling remote desktop for VM.
2026-04-27 02:33:30 (20948): Enabling shared directory for VM.
2026-04-27 02:33:31 (20948): Starting VM using VBoxManage interface. (boinc_acac4f67ddb42625, slot#1)
2026-04-27 02:33:37 (20948): Successfully started VM. (PID = '6652')
2026-04-27 02:33:37 (20948): Reporting VM Process ID to BOINC.
2026-04-27 02:33:37 (20948): Guest Log: BIOS: VirtualBox 7.1.12
2026-04-27 02:33:37 (20948): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 02:33:37 (20948): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 02:33:37 (20948): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 02:33:37 (20948): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 02:33:37 (20948): Detected: Web Application Enabled (http://localhost:54035)
2026-04-27 02:33:37 (20948): Detected: Remote Desktop Enabled (localhost:54036)
2026-04-27 02:33:37 (20948): Preference change detected
2026-04-27 02:33:37 (20948): Setting CPU throttle for VM. (100%)
2026-04-27 02:33:38 (20948): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 02:33:39 (20948): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 02:33:39 (20948): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 02:33:42 (20948): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 02:33:42 (20948): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 02:33:42 (20948): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 02:33:48 (20948): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 02:33:48 (20948): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-27 02:33:54 (20948): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000217 main     Log opened 2026-04-27T02:33:53.057133000Z
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000349 main     OS Product: Linux
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000384 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000421 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000451 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000452 main     Process ID: 1381
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.000453 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 02:33:54 (20948): Guest Log: 00:00:00.001536 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 02:33:54 (20948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 02:33:54 (20948): Guest Log: [INFO] Mounting shared directory
2026-04-27 02:33:54 (20948): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 02:33:58 (20948): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 02:33:58 (20948): Guest Log: [INFO] Detected branch: prod
2026-04-27 02:33:58 (20948): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 02:33:58 (20948): Guest Log: Copying input files
2026-04-27 02:34:04 (20948): Guest Log: 00:00:10.003801 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 757 213 000ns (GuestNow=1 777 253 644 303 232 000 ns GuestLast=1 777 257 233 060 445 000 ns fSetTimeLastLoop=true )
2026-04-27 02:34:05 (20948): Guest Log: Copied input files into RunAtlas.
2026-04-27 02:34:05 (20948): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2026-04-27 02:34:12 (20948): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 02:34:12 (20948): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 02:34:12 (20948): Guest Log: 2.6.3.0 1657 0 29560 158909 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2026-04-27 02:34:13 (20948): Guest Log: copied the webapp to /var/www
2026-04-27 02:34:13 (20948): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-27 02:34:13 (20948): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-27 02:34:13 (20948): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 02:34:13 (20948): Guest Log:  *** Starting ATLAS job. (PandaID=7114621489 taskID=49912683) ***
2026-04-27 04:13:42 (20948): Status Report: Elapsed Time: '6000.000000'
2026-04-27 04:13:42 (20948): Status Report: CPU Time: '22061.234375'
2026-04-27 05:53:47 (20948): Status Report: Elapsed Time: '12000.000000'
2026-04-27 05:53:47 (20948): Status Report: CPU Time: '45709.109375'
2026-04-27 06:49:16 (20948): Guest Log:  *** Job finished ***
2026-04-27 06:49:16 (20948): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:07,730 | INFO     | all workflow threads have been joined
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:07,730 | INFO     | end of generic workflow (traces error code: 0)
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:07,730 | INFO     | traces error code: 0
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:07,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,177 | INFO     | PID=6060 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,180 | INFO     | found 0 job(s) in 20 queues
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,180 | INFO     | [monitor] control thread has ended
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,289 [wrapper] ==== pilot stdout END ====
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,294 [wrapper] ==== wrapper stdout RESUME ====
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,300 [wrapper] pilotpid: 6060
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,305 [wrapper] Pilot exit status: 0
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,339 [wrapper] pandaids: 7114621489
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,372 [wrapper] cleanup supervisor_pilot 28739 6061
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,380 [wrapper] Test setup, not cleaning
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,385 [wrapper] apfmon messages muted
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,391 [wrapper] ==== wrapper stdout END ====
2026-04-27 06:49:16 (20948): Guest Log: 2026-04-27 05:49:15,397 [wrapper] ==== wrapper stderr END ====
2026-04-27 06:49:16 (20948): Guest Log:  *** Error codes and diagnostics ***
2026-04-27 06:49:16 (20948): Guest Log:     "exeErrorCode": 0,
2026-04-27 06:49:16 (20948): Guest Log:     "pilotErrorCode": 0,
2026-04-27 06:49:16 (20948): Guest Log:  *** Listing of results directory ***
2026-04-27 06:49:16 (20948): Guest Log: total 218316
2026-04-27 06:49:16 (20948): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 26 12:59 pilot3.tar.gz
2026-04-27 06:49:16 (20948): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 26 13:00 runpilot2-wrapper.sh
2026-04-27 06:49:16 (20948): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 26 13:03 queuedata.json
2026-04-27 06:49:16 (20948): Guest Log: -rwxr-xr-x. 1 atlas atlas      9216 Apr 27 01:34 init_data.xml
2026-04-27 06:49:16 (20948): Guest Log: -rwxr-xr-x. 1 atlas atlas    697427 Apr 27 01:34 input.tar.gz
2026-04-27 06:49:16 (20948): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 27 01:34 start_atlas.sh
2026-04-27 06:49:16 (20948): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 27 01:34 EVNT.49912679._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-27 06:49:16 (20948): Guest Log: -rw-r--r--. 1 atlas atlas      2615 Apr 27 01:34 pandaJob.out
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas        50 Apr 27 01:34 setup.sh.local
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas    997530 Apr 27 01:34 agis_schedconf.cvmfs.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas       411 Apr 27 01:34 workernode_map.json
2026-04-27 06:49:16 (20948): Guest Log: drwx------. 5 atlas atlas      4096 Apr 27 01:34 pilot3
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas 215989440 Apr 27 05:48 HITS.49912683._000029.pool.root.1
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 27 05:48 memory_monitor_summary.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 27 05:48 agis_ddmendpoints.agis.ALL.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas    361748 Apr 27 05:48 log.49912683._000029.job.log.tgz.1
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas      6338 Apr 27 05:48 heartbeat_new.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas      6229 Apr 27 05:48 heartbeat.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas       744 Apr 27 05:49 pilotlog.txt
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 05:49 pilot_heartbeat.json
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas   1387449 Apr 27 05:49 log.49912683._000029.job.log.1
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 05:49 output.list
2026-04-27 06:49:16 (20948): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 27 05:49 runtime_log
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas   1771520 Apr 27 05:49 result.tar.gz
2026-04-27 06:49:16 (20948): Guest Log: -rw-r--r--. 1 atlas atlas      8839 Apr 27 05:49 runtime_log.err
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas       654 Apr 27 05:49 0c63050d43e1.diag
2026-04-27 06:49:16 (20948): Guest Log: Looking for outputfile HITS.49912683._000029.pool.root.1
2026-04-27 06:49:16 (20948): Guest Log: HITS file was successfully produced
2026-04-27 06:49:16 (20948): Guest Log: -rw-------. 1 atlas atlas 215989440 Apr 27 05:48 /home/atlas/RunAtlas/HITS.49912683._000029.pool.root.1
2026-04-27 06:49:17 (20948): Guest Log: Successfully finished the ATLAS job!
2026-04-27 06:49:17 (20948): Guest Log: Copying the results back to the shared directory!
2026-04-27 06:49:18 (20948): Guest Log:  *** Contents of shared directory: ***
2026-04-27 06:49:18 (20948): Guest Log: total 1343064
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root 1156801372 Apr 27 01:33 ATLAS.root_0
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root  215989440 Apr 27 05:49 HITS.pool.root.1
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root       9216 Apr 27 01:33 init_data.xml
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root     697427 Apr 26 13:43 input.tar.gz
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root    1771520 Apr 27 05:49 result.tar.gz
2026-04-27 06:49:18 (20948): Guest Log: -rwxrwxrwx. 1 root root      15667 Apr 26 13:43 start_atlas.sh
2026-04-27 06:49:18 (20948): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-27 06:49:18 (20948): VM Completion File Detected.
2026-04-27 06:49:18 (20948): Powering off VM.
2026-04-27 06:49:19 (20948): Successfully stopped VM.
2026-04-27 06:49:19 (20948): Deregistering VM. (boinc_acac4f67ddb42625, slot#1)
2026-04-27 06:49:19 (20948): Removing network bandwidth throttle group from VM.
2026-04-27 06:49:19 (20948): Removing VM from VirtualBox.
2026-04-27 06:49:25 (20948): called boinc_finish(0)

</stderr_txt>
]]>

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