Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-27 01:26:35 (3276): vboxwrapper version 26210
2026-04-27 01:26:35 (3276): BOINC client version: 8.2.9
2026-04-27 01:26:35 (3276): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-04-27 01:26:36 (3276): Successfully copied 'init_data.xml' to the shared directory.
2026-04-27 01:26:36 (3276): Create VM. (boinc_84e33d61f0053118, slot#0)
2026-04-27 01:26:36 (3276): Setting Memory Size for VM. (6600MB)
2026-04-27 01:26:37 (3276): Setting CPU Count for VM. (4)
2026-04-27 01:26:37 (3276): Setting Chipset Options for VM.
2026-04-27 01:26:37 (3276): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-27 01:26:37 (3276): Setting Boot Options for VM.
2026-04-27 01:26:38 (3276): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-27 01:26:38 (3276): Enabling VM Network Access.
2026-04-27 01:26:38 (3276): Disabling USB Support for VM.
2026-04-27 01:26:39 (3276): Disabling COM Port Support for VM.
2026-04-27 01:26:39 (3276): Disabling LPT Port Support for VM.
2026-04-27 01:26:39 (3276): Disabling Audio Support for VM.
2026-04-27 01:26:39 (3276): Disabling Clipboard Support for VM.
2026-04-27 01:26:40 (3276): Disabling Drag and Drop Support for VM.
2026-04-27 01:26:40 (3276): Adding storage controller(s) to VM.
2026-04-27 01:26:40 (3276): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-27 01:26:41 (3276): Adding VirtualBox Guest Additions to VM.
2026-04-27 01:26:41 (3276): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-27 01:26:41 (3276): forwarding host port 63516 to guest port 80
2026-04-27 01:26:42 (3276): Enabling remote desktop for VM.
2026-04-27 01:26:42 (3276): Enabling shared directory for VM.
2026-04-27 01:26:43 (3276): Starting VM using VBoxManage interface. (boinc_84e33d61f0053118, slot#0)
2026-04-27 01:26:49 (3276): Successfully started VM. (PID = '23820')
2026-04-27 01:26:49 (3276): Reporting VM Process ID to BOINC.
2026-04-27 01:26:49 (3276): Guest Log: BIOS: VirtualBox 7.1.12
2026-04-27 01:26:49 (3276): Guest Log: CPUID EDX: 0x178bfbff
2026-04-27 01:26:49 (3276): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-27 01:26:49 (3276): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-27 01:26:49 (3276): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-27 01:26:49 (3276): Detected: Web Application Enabled (http://localhost:63516)
2026-04-27 01:26:49 (3276): Detected: Remote Desktop Enabled (localhost:63517)
2026-04-27 01:26:49 (3276): Preference change detected
2026-04-27 01:26:49 (3276): Setting CPU throttle for VM. (100%)
2026-04-27 01:26:50 (3276): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-27 01:26:51 (3276): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-27 01:26:51 (3276): Guest Log: BIOS: Booting from Hard Disk...
2026-04-27 01:26:54 (3276): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-27 01:26:54 (3276): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-27 01:26:54 (3276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-27 01:27:02 (3276): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-27 01:27:02 (3276): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-04-27 01:27:08 (3276): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000203 main     Log opened 2026-04-27T01:27:06.746646000Z
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000325 main     OS Product: Linux
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000360 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000387 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000416 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000417 main     Process ID: 1380
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.000418 main     Package type: LINUX_64BITS_GENERIC
2026-04-27 01:27:08 (3276): Guest Log: 00:00:00.001570 main     5.2.32 r132073 started. Verbose level = 0
2026-04-27 01:27:08 (3276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-27 01:27:08 (3276): Guest Log: [INFO] Mounting shared directory
2026-04-27 01:27:08 (3276): Guest Log: [INFO] Checking for init_data.xml
2026-04-27 01:27:14 (3276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-27 01:27:14 (3276): Guest Log: [INFO] Detected branch: prod
2026-04-27 01:27:14 (3276): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-27 01:27:14 (3276): Guest Log: Copying input files
2026-04-27 01:27:16 (3276): Guest Log: Copied input files into RunAtlas.
2026-04-27 01:27:16 (3276): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2026-04-27 01:27:18 (3276): Guest Log: 00:00:10.003394 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 538 047 000ns (GuestNow=1 777 249 638 211 376 000 ns GuestLast=1 777 253 226 749 423 000 ns fSetTimeLastLoop=true )
2026-04-27 01:27:24 (3276): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-27 01:27:24 (3276): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-27 01:27:24 (3276): Guest Log: 2.6.3.0 1657 0 31616 158908 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2026-04-27 01:27:25 (3276): Guest Log: copied the webapp to /var/www
2026-04-27 01:27:25 (3276): Guest Log: ATHENA_PROC_NUMBER=4
2026-04-27 01:27:25 (3276): Guest Log: ATHENA_CORE_NUMBER=4
2026-04-27 01:27:25 (3276): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-27 01:27:25 (3276): Guest Log:  *** Starting ATLAS job. (PandaID=7114620836 taskID=49889132) ***
2026-04-27 03:06:54 (3276): Status Report: Elapsed Time: '6000.000000'
2026-04-27 03:06:54 (3276): Status Report: CPU Time: '22006.000000'
2026-04-27 04:46:59 (3276): Status Report: Elapsed Time: '12000.000000'
2026-04-27 04:46:59 (3276): Status Report: CPU Time: '45703.812500'
2026-04-27 05:33:42 (3276): Guest Log:  *** Job finished ***
2026-04-27 05:33:42 (3276): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:28,403 | INFO     | end of generic workflow (traces error code: 0)
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:28,403 | INFO     | traces error code: 0
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:28,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,211 | INFO     | PID=6043 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | INFO     | found 0 job(s) in 20 queues
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | CRITICAL | thread 'MainThread' is not alive
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,213 | INFO     | [monitor] control thread has ended
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,318 [wrapper] ==== pilot stdout END ====
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,325 [wrapper] ==== wrapper stdout RESUME ====
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,330 [wrapper] pilotpid: 6043
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,336 [wrapper] Pilot exit status: 0
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,375 [wrapper] pandaids: 7114620836
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,411 [wrapper] cleanup supervisor_pilot 28813 6044
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,417 [wrapper] Test setup, not cleaning
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,423 [wrapper] apfmon messages muted
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,429 [wrapper] ==== wrapper stdout END ====
2026-04-27 05:33:42 (3276): Guest Log: 2026-04-27 04:33:37,435 [wrapper] ==== wrapper stderr END ====
2026-04-27 05:33:42 (3276): Guest Log:  *** Error codes and diagnostics ***
2026-04-27 05:33:42 (3276): Guest Log:     "exeErrorCode": 0,
2026-04-27 05:33:42 (3276): Guest Log:     "pilotErrorCode": 0,
2026-04-27 05:33:42 (3276): Guest Log:  *** Listing of results directory ***
2026-04-27 05:33:42 (3276): Guest Log: total 161756
2026-04-27 05:33:42 (3276): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 26 12:59 pilot3.tar.gz
2026-04-27 05:33:42 (3276): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 26 13:00 runpilot2-wrapper.sh
2026-04-27 05:33:42 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 26 13:03 queuedata.json
2026-04-27 05:33:42 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas      9216 Apr 27 00:27 init_data.xml
2026-04-27 05:33:42 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas    697405 Apr 27 00:27 input.tar.gz
2026-04-27 05:33:42 (3276): Guest Log: -rwxr-xr-x. 1 atlas atlas     15667 Apr 27 00:27 start_atlas.sh
2026-04-27 05:33:42 (3276): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 27 00:27 EVNT.49889128._000001.pool.root.1 -> /data/./ATLAS.root_0
2026-04-27 05:33:42 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      2604 Apr 27 00:27 pandaJob.out
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas        50 Apr 27 00:27 setup.sh.local
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas    997538 Apr 27 00:27 agis_schedconf.cvmfs.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas       411 Apr 27 00:28 workernode_map.json
2026-04-27 05:33:42 (3276): Guest Log: drwx------. 5 atlas atlas      4096 Apr 27 00:28 pilot3
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas 158210085 Apr 27 04:32 HITS.49889132._000017.pool.root.1
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 27 04:32 memory_monitor_summary.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 27 04:33 agis_ddmendpoints.agis.ALL.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas    341472 Apr 27 04:33 log.49889132._000017.job.log.tgz.1
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas      6330 Apr 27 04:33 heartbeat_new.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas      6221 Apr 27 04:33 heartbeat.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas       814 Apr 27 04:33 pilotlog.txt
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas        95 Apr 27 04:33 pilot_heartbeat.json
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas   1342209 Apr 27 04:33 log.49889132._000017.job.log.1
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas       357 Apr 27 04:33 output.list
2026-04-27 05:33:42 (3276): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 27 04:33 runtime_log
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas   1699840 Apr 27 04:33 result.tar.gz
2026-04-27 05:33:42 (3276): Guest Log: -rw-r--r--. 1 atlas atlas      8839 Apr 27 04:33 runtime_log.err
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas       654 Apr 27 04:33 0c57fc0c24ab.diag
2026-04-27 05:33:42 (3276): Guest Log: Looking for outputfile HITS.49889132._000017.pool.root.1
2026-04-27 05:33:42 (3276): Guest Log: HITS file was successfully produced
2026-04-27 05:33:42 (3276): Guest Log: -rw-------. 1 atlas atlas 158210085 Apr 27 04:32 /home/atlas/RunAtlas/HITS.49889132._000017.pool.root.1
2026-04-27 05:33:43 (3276): Guest Log: Successfully finished the ATLAS job!
2026-04-27 05:33:43 (3276): Guest Log: Copying the results back to the shared directory!
2026-04-27 05:33:43 (3276): Guest Log:  *** Contents of shared directory: ***
2026-04-27 05:33:43 (3276): Guest Log: total 550852
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root 403429869 Apr 27 00:26 ATLAS.root_0
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root 158210085 Apr 27 04:33 HITS.pool.root.1
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root      9216 Apr 27 00:26 init_data.xml
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root    697405 Apr 26 13:45 input.tar.gz
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root   1699840 Apr 27 04:33 result.tar.gz
2026-04-27 05:33:43 (3276): Guest Log: -rwxrwxrwx. 1 root root     15667 Apr 26 13:45 start_atlas.sh
2026-04-27 05:33:43 (3276): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-27 05:33:43 (3276): VM Completion File Detected.
2026-04-27 05:33:43 (3276): Powering off VM.
2026-04-27 05:33:44 (3276): Successfully stopped VM.
2026-04-27 05:33:44 (3276): Deregistering VM. (boinc_84e33d61f0053118, slot#0)
2026-04-27 05:33:44 (3276): Removing network bandwidth throttle group from VM.
2026-04-27 05:33:44 (3276): Removing VM from VirtualBox.
2026-04-27 05:33:49 (3276): called boinc_finish(0)

</stderr_txt>
]]>

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