Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
20:52:15 (985124): wrapper (7.7.26015): starting
20:52:15 (985124): wrapper: running run_atlas (--nthreads 4)
[2026-04-26 20:52:15] Arguments: --nthreads 4
[2026-04-26 20:52:15] Threads: 4
[2026-04-26 20:52:15] Checking for CVMFS
[2026-04-26 20:52:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 20:52:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 20:52:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 20:52:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 20:52:17] 2.13.3.0 906763 130 44996 158900 1 50 2654526 4096001 0 130560 0 56753 99.967 6718 993 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-26 20:52:17] CVMFS is ok
[2026-04-26 20:52:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-26 20:52:17] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-26 20:52:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-26 20:52:17] Further information can be found at the LHC@home message board.
[2026-04-26 20:52:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 20:52:17] Checking for apptainer binary...
[2026-04-26 20:52:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 20:52:17] Running /usr/bin/apptainer --version
[2026-04-26 20:52:17] apptainer version 1.4.2
[2026-04-26 20:52:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 20:52:17] Obake-chan
[2026-04-26 20:52:17] apptainer works
[2026-04-26 20:52:17] Set ATHENA_PROC_NUMBER=4
[2026-04-26 20:52:17] Set ATHENA_CORE_NUMBER=4
[2026-04-26 20:52:17] Starting ATLAS job with PandaID=7098472954
[2026-04-26 20:52:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 22:54:14]  *** The last 200 lines of the pilot log: ***
[2026-04-26 22:54:14] 2026-04-26 20:53:41,836 | INFO     | preparing for final server update for job 7098472954 in state='finished'
[2026-04-26 22:54:14] 2026-04-26 20:53:41,836 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7098472954/jobReport.json
[2026-04-26 22:54:14] 2026-04-26 20:53:41,838 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-04-26 22:54:14] 2026-04-26 20:53:41,838 | INFO     | this job has now completed (state=finished)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,839 | INFO     | log transfer has been attempted: DONE
[2026-04-26 22:54:14] 2026-04-26 20:53:41,839 | INFO     | job 7098472954 has finished - writing final server update
[2026-04-26 22:54:14] 2026-04-26 20:53:41,839 | INFO     | total number of processed events: 400 (read)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,841 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7098472954/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,842 | INFO     | extracted standard info from prmon json
[2026-04-26 22:54:14] 2026-04-26 20:53:41,842 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 22:54:14] 2026-04-26 20:53:41,842 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 22:54:14] 2026-04-26 20:53:41,842 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 22:54:14] 2026-04-26 20:53:41,844 | INFO     | fitting pss+swap vs Time
[2026-04-26 22:54:14] 2026-04-26 20:53:41,844 | INFO     | sum of square deviations: 522502820.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,844 | INFO     | sum of deviations: -8369345424.000001
[2026-04-26 22:54:14] 2026-04-26 20:53:41,844 | INFO     | mean x (centered): 0.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,844 | INFO     | mean y: 2418661.1092436975
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | intersect: 2418661.1092436975
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | chi2: 1.684755680349776
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | sum of square deviations: 459366752.5
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | sum of deviations: -7734984769.000001
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | mean x (centered): 0.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | mean y: 2420194.263157895
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | intersect: 2420194.263157895
[2026-04-26 22:54:14] 2026-04-26 20:53:41,845 | INFO     | chi2: 1.681910582321047
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | current chi2=1.681910582321047 (change=0.16887303375278978 %)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | right removable region: 113
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | sum of square deviations: 459366752.5
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | sum of deviations: -23039569795.5
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | mean x (centered): 0.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | mean y: 2453152.3596491227
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | intersect: 2453152.3596491227
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | chi2: 0.23181178319658788
[2026-04-26 22:54:14] 2026-04-26 20:53:41,846 | INFO     | current chi2=0.23181178319658788 (change=86.24062907753718 %)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | sum of square deviations: 401533110.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | sum of deviations: -17711278874.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | mean x (centered): 0.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | mean y: 2439072.247706422
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | intersect: 2439072.247706422
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | chi2: 0.21497069026068574
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | current chi2=0.21497069026068574 (change=7.264985715424162 %)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,847 | INFO     | left removable region: 10
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | sum of square deviations: 338804492.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | sum of deviations: -16605702979.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | mean x (centered): 0.0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | mean y: 2442301.0970873786
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | intersect: 2442301.0970873786
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | chi2: 0.2059997160915123
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | current memory leak: -49.01 B/s (using 103 data points, chi2=0.21)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,848 | INFO     | could have reported an average CPU frequency of 2274 MHz (8 samples)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | ..............................
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . Timing measurements:
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . get job = 0 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . initial setup = 6 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . payload setup = 8 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . stage-in = 0 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . payload execution = 7238 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . stage-out = 0 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | . log creation = 0 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,849 | INFO     | ..............................
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | 
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | job summary report
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | --------------------------------------------------
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | PanDA job id: 7098472954
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | task id: 49545114
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | errors: (none)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | pilot state: finished 
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | transexitcode: 0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | exeerrorcode: 0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | exeerrordiag: 
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | exitcode: 0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,906 | INFO     | exitmsg: OK
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | cpuconsumptiontime: 27221 s
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | nevents: 400
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | neventsw: 0
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | pid: 994061
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | pgrp: 994061
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | corecount: 4
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | event service: False
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | sizes: {0: 2276460, 11: 2276460, 7250: 2303813, 7251: 2312881, 7254: 2313019}
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | --------------------------------------------------
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | 
[2026-04-26 22:54:14] 2026-04-26 20:53:41,907 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-04-26 22:54:14] 2026-04-26 20:53:41,926 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,926 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,926 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,926 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 22:54:14] 2026-04-26 20:53:41,927 | INFO     | job 7098472954 has completed (purged errors)
[2026-04-26 22:54:14] 2026-04-26 20:53:41,928 | INFO     | overall cleanup function is called
[2026-04-26 22:54:14] 2026-04-26 20:53:42,935 | INFO     | --- collectZombieJob: --- 10, [994061]
[2026-04-26 22:54:14] 2026-04-26 20:53:42,936 | INFO     | zombie collector waiting for pid 994061
[2026-04-26 22:54:14] 2026-04-26 20:53:42,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 22:54:14] 2026-04-26 20:53:42,936 | INFO     | collected zombie processes
[2026-04-26 22:54:14] 2026-04-26 20:53:42,936 | INFO     | will attempt to kill all subprocesses of pid=994061
[2026-04-26 22:54:14] 2026-04-26 20:53:43,090 | INFO     | process IDs to be killed: [994061] (in reverse order)
[2026-04-26 22:54:14] 2026-04-26 20:53:43,149 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 22:54:14] 2026-04-26 20:53:43,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 22:54:14] 2026-04-26 20:53:43,159 | INFO     | did not find any defunct processes belonging to 994061
[2026-04-26 22:54:14] 2026-04-26 20:53:43,166 | WARNING  | process 994061 can no longer be monitored (due to stat problems) - aborting
[2026-04-26 22:54:14] 2026-04-26 20:53:43,168 | INFO     | did not find any defunct processes belonging to 994061
[2026-04-26 22:54:14] 2026-04-26 20:53:43,168 | INFO     | Ready for new job
[2026-04-26 22:54:14] 2026-04-26 20:53:43,169 | INFO     | ***************************************
[2026-04-26 22:54:14] 2026-04-26 20:53:43,169 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 22:54:14] 2026-04-26 20:53:43,169 | INFO     | ***************************************
[2026-04-26 22:54:14] 2026-04-26 20:53:43,169 | INFO     | 
[2026-04-26 22:54:14] 2026-04-26 20:53:43,171 | INFO     | architecture information:
[2026-04-26 22:54:14] 2026-04-26 20:53:43,171 | INFO     | executing command: cat /etc/os-release
[2026-04-26 22:54:14] 2026-04-26 20:53:43,184 | INFO     | cat /etc/os-release:
[2026-04-26 22:54:14] NAME="CentOS Linux"
[2026-04-26 22:54:14] VERSION="7 (Core)"
[2026-04-26 22:54:14] ID="centos"
[2026-04-26 22:54:14] ID_LIKE="rhel fedora"
[2026-04-26 22:54:14] VERSION_ID="7"
[2026-04-26 22:54:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 22:54:14] ANSI_COLOR="0;31"
[2026-04-26 22:54:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 22:54:14] HOME_URL="https://www.centos.org/"
[2026-04-26 22:54:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 22:54:14] 
[2026-04-26 22:54:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 22:54:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 22:54:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 22:54:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 22:54:14] 
[2026-04-26 22:54:14] 2026-04-26 20:53:43,184 | INFO     | ***************************************
[2026-04-26 22:54:14] 2026-04-26 20:53:43,271 | INFO     | using path: /var/lib/boinc-client/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 22:54:14] 2026-04-26 20:53:43,363 | INFO     | number of running child processes to parent process 994061: 1
[2026-04-26 22:54:14] 2026-04-26 20:53:43,363 | INFO     | maximum number of monitored processes: 6
[2026-04-26 22:54:14] 2026-04-26 20:53:43,363 | INFO     | aborting job monitoring since job object (job id=7098472954) has expired
[2026-04-26 22:54:14] 2026-04-26 20:53:43,686 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-04-26 22:54:14] 2026-04-26 20:53:43,699 | INFO     | sufficient remaining disk space (74121740288 B)
[2026-04-26 22:54:14] 2026-04-26 20:53:43,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 22:54:14] 2026-04-26 20:53:43,699 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 22:54:14] 2026-04-26 20:53:43,699 | INFO     | update_server=False
[2026-04-26 22:54:14] 2026-04-26 20:53:43,700 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 22:54:14] 2026-04-26 20:53:43,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 22:54:14] 2026-04-26 20:53:43,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 22:54:14] 2026-04-26 20:53:43,700 | INFO     | will abort loop
[2026-04-26 22:54:14] 2026-04-26 20:53:44,124 | INFO     | all data control threads have been joined
[2026-04-26 22:54:14] 2026-04-26 20:53:44,560 | INFO     | all job control threads have been joined
[2026-04-26 22:54:14] 2026-04-26 20:53:44,704 | INFO     | [job] retrieve thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:44,705 | INFO     | [job] queue monitor thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:44,705 | INFO     | [job] job monitor thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:44,706 | INFO     | [data] copytool_in thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:44,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 22:54:14] 2026-04-26 20:53:44,819 | INFO     | all payload control threads have been joined
[2026-04-26 22:54:14] 2026-04-26 20:53:45,129 | INFO     | [data] control thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:45,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 22:54:14] 2026-04-26 20:53:45,565 | INFO     | [job] control thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:45,618 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:45,684 | INFO     | [job] validate thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:45,685 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:45,824 | INFO     | [payload] control thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:46,090 | INFO     | [payload] validate_post thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:46,152 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:46,184 | INFO     | [payload] failed_post thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:46,760 | INFO     | [data] copytool_out thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:48,481 | INFO     | [monitor] cgroup control has ended
[2026-04-26 22:54:14] 2026-04-26 20:53:49,310 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:54,402 | INFO     | job.realtimelogging is not enabled
[2026-04-26 22:54:14] 2026-04-26 20:53:55,408 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 22:54:14] 2026-04-26 20:53:56,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134699613943616)>', '<ExcThread(monitor, started 134699250849536)>']
[2026-04-26 22:54:14] 2026-04-26 20:54:01,876 | INFO     | all workflow threads have been joined
[2026-04-26 22:54:14] 2026-04-26 20:54:01,876 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 22:54:14] 2026-04-26 20:54:01,877 | INFO     | traces error code: 0
[2026-04-26 22:54:14] 2026-04-26 20:54:01,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 22:54:14] 2026-04-26 20:54:14,392 | INFO     | PID=989390 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-26 22:54:14] 2026-04-26 20:54:14,393 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 22:54:14] 2026-04-26 20:54:14,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 22:54:14] 2026-04-26 20:54:14,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 22:54:14] 2026-04-26 20:54:14,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 22:54:14] 2026-04-26 20:54:14,394 | INFO     | [monitor] control thread has ended
[2026-04-26 22:54:14] 2026-04-26 20:54:14,488 [wrapper] ==== pilot stdout END ====
[2026-04-26 22:54:14] 2026-04-26 20:54:14,490 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 22:54:14] 2026-04-26 20:54:14,493 [wrapper] pilotpid: 989390
[2026-04-26 22:54:14] 2026-04-26 20:54:14,495 [wrapper] Pilot exit status: 0
[2026-04-26 22:54:14] 2026-04-26 20:54:14,507 [wrapper] pandaids: 7098472954
[2026-04-26 22:54:14] 2026-04-26 20:54:14,544 [wrapper] cleanup supervisor_pilot 1058084 989391
[2026-04-26 22:54:14] 2026-04-26 20:54:14,546 [wrapper] Test setup, not cleaning
[2026-04-26 22:54:14] 2026-04-26 20:54:14,549 [wrapper] apfmon messages muted
[2026-04-26 22:54:14] 2026-04-26 20:54:14,551 [wrapper] ==== wrapper stdout END ====
[2026-04-26 22:54:14] 2026-04-26 20:54:14,554 [wrapper] ==== wrapper stderr END ====
[2026-04-26 22:54:14]  *** Error codes and diagnostics ***
[2026-04-26 22:54:14]     "exeErrorCode": 0,
[2026-04-26 22:54:14]     "pilotErrorCode": 0,
[2026-04-26 22:54:14]  *** Listing of results directory ***
[2026-04-26 22:54:14] insgesamt 458784
[2026-04-26 22:54:14] -rwx------ 1 boinc boinc     36322 Apr 26 11:46 runpilot2-wrapper.sh
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc      5631 Apr 26 11:46 queuedata.json
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc    683926 Apr 26 11:46 pilot3.tar.gz
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc       100 Apr 26 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 22:54:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 20:52 run_atlas
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc       105 Apr 26 20:52 job.xml
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc 279664926 Apr 26 20:52 EVNT.49539591._000546.pool.root.1
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc      9698 Apr 26 20:52 init_data.xml
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc     15667 Apr 26 20:52 start_atlas.sh
[2026-04-26 22:54:14] drwxrwx--x 2 boinc boinc      4096 Apr 26 20:52 shared
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc    697428 Apr 26 20:52 input.tar.gz
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc         0 Apr 26 20:52 boinc_lockfile
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc      2606 Apr 26 20:52 pandaJob.out
[2026-04-26 22:54:14] -rw------- 1 boinc boinc    997530 Apr 26 20:52 agis_schedconf.cvmfs.json
[2026-04-26 22:54:14] -rw------- 1 boinc boinc   1509089 Apr 26 20:52 agis_ddmendpoints.agis.ALL.json
[2026-04-26 22:54:14] -rw------- 1 boinc boinc       416 Apr 26 20:52 workernode_map.json
[2026-04-26 22:54:14] drwx------ 5 boinc boinc      4096 Apr 26 20:52 pilot3
[2026-04-26 22:54:14] -rw------- 1 boinc boinc 184068693 Apr 26 22:53 HITS.49545114._032390.pool.root.1
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc       487 Apr 26 22:53 boinc_task_state.xml
[2026-04-26 22:54:14] -rw------- 1 boinc boinc      1015 Apr 26 22:53 memory_monitor_summary.json
[2026-04-26 22:54:14] -rw------- 1 boinc boinc    271486 Apr 26 22:53 log.49545114._032390.job.log.tgz.1
[2026-04-26 22:54:14] -rw------- 1 boinc boinc      6292 Apr 26 22:53 heartbeat_new.json
[2026-04-26 22:54:14] -rw------- 1 boinc boinc      6183 Apr 26 22:53 heartbeat.json
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc      8192 Apr 26 22:54 boinc_mmap_file
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc        27 Apr 26 22:54 wrapper_checkpoint.txt
[2026-04-26 22:54:14] -rw------- 1 boinc boinc       746 Apr 26 22:54 pilotlog.txt
[2026-04-26 22:54:14] -rw------- 1 boinc boinc        95 Apr 26 22:54 pilot_heartbeat.json
[2026-04-26 22:54:14] -rw------- 1 boinc boinc    688865 Apr 26 22:54 log.49545114._032390.job.log.1
[2026-04-26 22:54:14] -rw------- 1 boinc boinc       357 Apr 26 22:54 output.list
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc       410 Apr 26 22:54 runtime_log
[2026-04-26 22:54:14] -rw------- 1 boinc boinc    983040 Apr 26 22:54 result.tar.gz
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc      8517 Apr 26 22:54 runtime_log.err
[2026-04-26 22:54:14] -rw------- 1 boinc boinc       644 Apr 26 22:54 dee9b1bdce39.diag
[2026-04-26 22:54:14] -rw-r--r-- 1 boinc boinc     21290 Apr 26 22:54 stderr.txt
[2026-04-26 22:54:14] HITS file was successfully produced:
[2026-04-26 22:54:14] -rw------- 1 boinc boinc 184068693 Apr 26 22:53 shared/HITS.pool.root.1
[2026-04-26 22:54:14]  *** Contents of shared directory: ***
[2026-04-26 22:54:14] insgesamt 454536
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc 279664926 Apr 26 20:52 ATLAS.root_0
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc     15667 Apr 26 20:52 start_atlas.sh
[2026-04-26 22:54:14] -rw-r--r-- 2 boinc boinc    697428 Apr 26 20:52 input.tar.gz
[2026-04-26 22:54:14] -rw------- 1 boinc boinc 184068693 Apr 26 22:53 HITS.pool.root.1
[2026-04-26 22:54:14] -rw------- 1 boinc boinc    983040 Apr 26 22:54 result.tar.gz
22:54:15 (985124): run_atlas exited; CPU time 27283.774278
22:54:15 (985124): called boinc_finish(0)

</stderr_txt>
]]>

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