Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
18:41:18 (906536): wrapper (7.7.26015): starting
18:41:18 (906536): wrapper: running run_atlas (--nthreads 4)
[2026-04-26 18:41:18] Arguments: --nthreads 4
[2026-04-26 18:41:18] Threads: 4
[2026-04-26 18:41:18] Checking for CVMFS
[2026-04-26 18:41:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 18:41:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 18:41:20] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 18:41:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 18:41:21] 2.13.3.0 906763 0 24992 158896 3 1 2637072 4096000 0 130560 0 0 0.000 1282 2281 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-04-26 18:41:21] CVMFS is ok
[2026-04-26 18:41:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-26 18:41:21] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-26 18:41:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-26 18:41:21] Further information can be found at the LHC@home message board.
[2026-04-26 18:41:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 18:41:21] Checking for apptainer binary...
[2026-04-26 18:41:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 18:41:21] Running /usr/bin/apptainer --version
[2026-04-26 18:41:21] apptainer version 1.4.2
[2026-04-26 18:41:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 18:41:21] Obake-chan
[2026-04-26 18:41:21] apptainer works
[2026-04-26 18:41:21] Set ATHENA_PROC_NUMBER=4
[2026-04-26 18:41:21] Set ATHENA_CORE_NUMBER=4
[2026-04-26 18:41:21] Starting ATLAS job with PandaID=7105794472
[2026-04-26 18:41:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 20:52:09]  *** The last 200 lines of the pilot log: ***
[2026-04-26 20:52:09] 2026-04-26 18:51:21,573 | INFO     | monitor loop #594: job 0:7105794472 is in state 'finished'
[2026-04-26 20:52:09] 2026-04-26 18:51:21,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,760 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-26 20:52:09] 2026-04-26 18:51:21,816 | INFO     | job 7105794472 has state=finished
[2026-04-26 20:52:09] 2026-04-26 18:51:21,816 | INFO     | preparing for final server update for job 7105794472 in state='finished'
[2026-04-26 20:52:09] 2026-04-26 18:51:21,816 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7105794472/jobReport.json
[2026-04-26 20:52:09] 2026-04-26 18:51:21,818 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-04-26 20:52:09] 2026-04-26 18:51:21,818 | INFO     | this job has now completed (state=finished)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,818 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,818 | INFO     | log transfer has been attempted: DONE
[2026-04-26 20:52:09] 2026-04-26 18:51:21,818 | INFO     | job 7105794472 has finished - writing final server update
[2026-04-26 20:52:09] 2026-04-26 18:51:21,819 | INFO     | total number of processed events: 400 (read)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,821 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7105794472/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,821 | INFO     | extracted standard info from prmon json
[2026-04-26 20:52:09] 2026-04-26 18:51:21,821 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 20:52:09] 2026-04-26 18:51:21,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 20:52:09] 2026-04-26 18:51:21,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 20:52:09] 2026-04-26 18:51:21,823 | INFO     | fitting pss+swap vs Time
[2026-04-26 20:52:09] 2026-04-26 18:51:21,823 | INFO     | sum of square deviations: 635130048.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,824 | INFO     | sum of deviations: -27732928308.999996
[2026-04-26 20:52:09] 2026-04-26 18:51:21,824 | INFO     | mean x (centered): 0.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,824 | INFO     | mean y: 2473751.2047244096
[2026-04-26 20:52:09] 2026-04-26 18:51:21,824 | INFO     | intersect: 2473751.2047244096
[2026-04-26 20:52:09] 2026-04-26 18:51:21,824 | INFO     | chi2: 1.5769588279995053
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | sum of square deviations: 563026370.5
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | sum of deviations: -25659973513.500004
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | mean x (centered): 0.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | mean y: 2478137.8278688523
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | intersect: 2478137.8278688523
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | chi2: 1.5687908118801832
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | current chi2=1.5687908118801832 (change=0.5179600110222164 %)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,825 | INFO     | right removable region: 121
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | sum of square deviations: 563026370.5
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | sum of deviations: -41093760261.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | mean x (centered): 0.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | mean y: 2501171.8852459015
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | intersect: 2501171.8852459015
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | chi2: 0.2509856743649049
[2026-04-26 20:52:09] 2026-04-26 18:51:21,826 | INFO     | current chi2=0.2509856743649049 (change=84.08419611796081 %)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | sum of square deviations: 496597218.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | sum of deviations: -36570655401.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | mean x (centered): 0.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | mean y: 2490772.3846153845
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | intersect: 2490772.3846153845
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | chi2: 0.25079171296893216
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | current chi2=0.25079171296893216 (change=0.07727986725279043 %)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,827 | INFO     | left removable region: 10
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | sum of square deviations: 424045160.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | sum of deviations: -33914162558.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | mean x (centered): 0.0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | mean y: 2497479.036036036
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | intersect: 2497479.036036036
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | chi2: 0.2324814717903356
[2026-04-26 20:52:09] 2026-04-26 18:51:21,828 | INFO     | current memory leak: -79.98 B/s (using 111 data points, chi2=0.23)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | could have reported an average CPU frequency of 2236 MHz (8 samples)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | ..............................
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . Timing measurements:
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . get job = 0 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . initial setup = 10 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . payload setup = 12 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . stage-in = 0 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . payload execution = 7737 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . stage-out = 0 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | . log creation = 0 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,829 | INFO     | ..............................
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | 
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | job summary report
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | --------------------------------------------------
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | PanDA job id: 7105794472
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | task id: 49263191
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | errors: (none)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | pilot state: finished 
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | transexitcode: 0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | exeerrorcode: 0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,936 | INFO     | exeerrordiag: 
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | exitcode: 0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | exitmsg: OK
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | cpuconsumptiontime: 28439 s
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | nevents: 400
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | neventsw: 0
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | pid: 915709
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | pgrp: 915709
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | corecount: 4
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | event service: False
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | sizes: {0: 2274893, 1: 2276467, 11: 2276495, 7754: 2304209, 7756: 2313221, 7760: 2313599}
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | --------------------------------------------------
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | 
[2026-04-26 20:52:09] 2026-04-26 18:51:21,937 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-04-26 20:52:09] 2026-04-26 18:51:21,958 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,958 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,958 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,958 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 20:52:09] 2026-04-26 18:51:21,959 | INFO     | job 7105794472 has completed (purged errors)
[2026-04-26 20:52:09] 2026-04-26 18:51:21,960 | INFO     | overall cleanup function is called
[2026-04-26 20:52:09] 2026-04-26 18:51:22,967 | INFO     | --- collectZombieJob: --- 10, [915709]
[2026-04-26 20:52:09] 2026-04-26 18:51:22,967 | INFO     | zombie collector waiting for pid 915709
[2026-04-26 20:52:09] 2026-04-26 18:51:22,967 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 20:52:09] 2026-04-26 18:51:22,968 | INFO     | collected zombie processes
[2026-04-26 20:52:09] 2026-04-26 18:51:22,968 | INFO     | will attempt to kill all subprocesses of pid=915709
[2026-04-26 20:52:09] 2026-04-26 18:51:23,062 | INFO     | process IDs to be killed: [915709] (in reverse order)
[2026-04-26 20:52:09] 2026-04-26 18:51:23,121 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 20:52:09] 2026-04-26 18:51:23,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 20:52:09] 2026-04-26 18:51:23,126 | INFO     | did not find any defunct processes belonging to 915709
[2026-04-26 20:52:09] 2026-04-26 18:51:23,130 | INFO     | did not find any defunct processes belonging to 915709
[2026-04-26 20:52:09] 2026-04-26 18:51:23,130 | INFO     | Ready for new job
[2026-04-26 20:52:09] 2026-04-26 18:51:23,132 | INFO     | ***************************************
[2026-04-26 20:52:09] 2026-04-26 18:51:23,132 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 20:52:09] 2026-04-26 18:51:23,132 | INFO     | ***************************************
[2026-04-26 20:52:09] 2026-04-26 18:51:23,132 | INFO     | 
[2026-04-26 20:52:09] 2026-04-26 18:51:23,133 | INFO     | architecture information:
[2026-04-26 20:52:09] 2026-04-26 18:51:23,133 | INFO     | executing command: cat /etc/os-release
[2026-04-26 20:52:09] 2026-04-26 18:51:23,146 | INFO     | cat /etc/os-release:
[2026-04-26 20:52:09] NAME="CentOS Linux"
[2026-04-26 20:52:09] VERSION="7 (Core)"
[2026-04-26 20:52:09] ID="centos"
[2026-04-26 20:52:09] ID_LIKE="rhel fedora"
[2026-04-26 20:52:09] VERSION_ID="7"
[2026-04-26 20:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 20:52:09] ANSI_COLOR="0;31"
[2026-04-26 20:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 20:52:09] HOME_URL="https://www.centos.org/"
[2026-04-26 20:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 20:52:09] 
[2026-04-26 20:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 20:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 20:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 20:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 20:52:09] 
[2026-04-26 20:52:09] 2026-04-26 18:51:23,146 | INFO     | ***************************************
[2026-04-26 20:52:09] 2026-04-26 18:51:23,648 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-04-26 20:52:09] 2026-04-26 18:51:23,661 | INFO     | sufficient remaining disk space (74244423680 B)
[2026-04-26 20:52:09] 2026-04-26 18:51:23,661 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 20:52:09] 2026-04-26 18:51:23,661 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 20:52:09] 2026-04-26 18:51:23,661 | INFO     | update_server=False
[2026-04-26 20:52:09] 2026-04-26 18:51:23,661 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 20:52:09] 2026-04-26 18:51:23,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 20:52:09] 2026-04-26 18:51:23,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 20:52:09] 2026-04-26 18:51:23,692 | INFO     | all data control threads have been joined
[2026-04-26 20:52:09] 2026-04-26 18:51:24,077 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-26 20:52:09] 2026-04-26 18:51:24,077 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-26 20:52:09] 2026-04-26 18:51:24,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 20:52:09] 2026-04-26 18:51:24,077 | INFO     | will abort loop
[2026-04-26 20:52:09] 2026-04-26 18:51:24,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 20:52:09] 2026-04-26 18:51:24,666 | INFO     | [job] retrieve thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:24,667 | INFO     | [job] queue monitor thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:24,682 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:24,697 | INFO     | [data] control thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:24,895 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:24,897 | INFO     | all payload control threads have been joined
[2026-04-26 20:52:09] 2026-04-26 18:51:24,930 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,082 | INFO     | [job] job monitor thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,093 | INFO     | [data] copytool_in thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,174 | INFO     | all job control threads have been joined
[2026-04-26 20:52:09] 2026-04-26 18:51:25,242 | INFO     | [payload] failed_post thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,760 | INFO     | [payload] validate_post thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:25,904 | INFO     | [payload] control thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:26,026 | INFO     | [job] validate thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:26,100 | INFO     | [data] copytool_out thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:26,179 | INFO     | [job] control thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:27,668 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 20:52:09] 2026-04-26 18:51:54,788 | INFO     | PID=911003 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-26 20:52:09] 2026-04-26 18:51:54,788 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 20:52:09] 2026-04-26 18:51:54,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 20:52:09] 2026-04-26 18:51:54,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 20:52:09] 2026-04-26 18:52:03,638 | INFO     | [monitor] cgroup control has ended
[2026-04-26 20:52:09] 2026-04-26 18:52:04,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139602260358976)>', '<ExcThread(monitor, started 139601763084032)>']
[2026-04-26 20:52:09] 2026-04-26 18:52:04,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 20:52:09] 2026-04-26 18:52:04,838 | INFO     | [monitor] control thread has ended
[2026-04-26 20:52:09] 2026-04-26 18:52:09,668 | INFO     | all workflow threads have been joined
[2026-04-26 20:52:09] 2026-04-26 18:52:09,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 20:52:09] 2026-04-26 18:52:09,668 | INFO     | traces error code: 0
[2026-04-26 20:52:09] 2026-04-26 18:52:09,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 20:52:09] 2026-04-26 18:52:09,759 [wrapper] ==== pilot stdout END ====
[2026-04-26 20:52:09] 2026-04-26 18:52:09,761 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 20:52:09] 2026-04-26 18:52:09,763 [wrapper] pilotpid: 911003
[2026-04-26 20:52:09] 2026-04-26 18:52:09,766 [wrapper] Pilot exit status: 0
[2026-04-26 20:52:09] 2026-04-26 18:52:09,775 [wrapper] pandaids: 7105794472
[2026-04-26 20:52:09] 2026-04-26 18:52:09,811 [wrapper] cleanup supervisor_pilot  979725 911004
[2026-04-26 20:52:09] 2026-04-26 18:52:09,814 [wrapper] Test setup, not cleaning
[2026-04-26 20:52:09] 2026-04-26 18:52:09,817 [wrapper] apfmon messages muted
[2026-04-26 20:52:09] 2026-04-26 18:52:09,819 [wrapper] ==== wrapper stdout END ====
[2026-04-26 20:52:09] 2026-04-26 18:52:09,825 [wrapper] ==== wrapper stderr END ====
[2026-04-26 20:52:09]  *** Error codes and diagnostics ***
[2026-04-26 20:52:09]     "exeErrorCode": 0,
[2026-04-26 20:52:09]     "pilotErrorCode": 0,
[2026-04-26 20:52:09]  *** Listing of results directory ***
[2026-04-26 20:52:09] insgesamt 413020
[2026-04-26 20:52:09] -rwx------ 1 boinc boinc     36322 Apr 25 13:27 runpilot2-wrapper.sh
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc    683926 Apr 25 13:43 pilot3.tar.gz
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc      5631 Apr 25 21:09 queuedata.json
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc       100 Apr 26 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 20:52:09] -rwxr-xr-x 1 boinc boinc      7986 Apr 26 18:41 run_atlas
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc       105 Apr 26 18:41 job.xml
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc 222357526 Apr 26 18:41 EVNT.49263189._000763.pool.root.1
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc      9698 Apr 26 18:41 init_data.xml
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc     15667 Apr 26 18:41 start_atlas.sh
[2026-04-26 20:52:09] drwxrwx--x 2 boinc boinc      4096 Apr 26 18:41 shared
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc    697428 Apr 26 18:41 input.tar.gz
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc         0 Apr 26 18:41 boinc_lockfile
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc      2576 Apr 26 18:41 pandaJob.out
[2026-04-26 20:52:09] -rw------- 1 boinc boinc    997522 Apr 26 18:41 agis_schedconf.cvmfs.json
[2026-04-26 20:52:09] -rw------- 1 boinc boinc   1509089 Apr 26 18:41 agis_ddmendpoints.agis.ALL.json
[2026-04-26 20:52:09] -rw------- 1 boinc boinc       412 Apr 26 18:41 workernode_map.json
[2026-04-26 20:52:09] drwx------ 5 boinc boinc      4096 Apr 26 18:41 pilot3
[2026-04-26 20:52:09] -rw------- 1 boinc boinc 194462587 Apr 26 20:50 HITS.49263191._075731.pool.root.1
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc       487 Apr 26 20:50 boinc_task_state.xml
[2026-04-26 20:52:09] -rw------- 1 boinc boinc        95 Apr 26 20:51 pilot_heartbeat.json
[2026-04-26 20:52:09] -rw------- 1 boinc boinc      1012 Apr 26 20:51 memory_monitor_summary.json
[2026-04-26 20:52:09] -rw------- 1 boinc boinc    258027 Apr 26 20:51 log.49263191._075731.job.log.tgz.1
[2026-04-26 20:52:09] -rw------- 1 boinc boinc      6290 Apr 26 20:51 heartbeat_new.json
[2026-04-26 20:52:09] -rw------- 1 boinc boinc      6181 Apr 26 20:51 heartbeat.json
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc        27 Apr 26 20:52 wrapper_checkpoint.txt
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc      8192 Apr 26 20:52 boinc_mmap_file
[2026-04-26 20:52:09] -rw------- 1 boinc boinc      4939 Apr 26 20:52 pilotlog.txt
[2026-04-26 20:52:09] -rw------- 1 boinc boinc    732056 Apr 26 20:52 log.49263191._075731.job.log.1
[2026-04-26 20:52:09] -rw------- 1 boinc boinc       357 Apr 26 20:52 output.list
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc       410 Apr 26 20:52 runtime_log
[2026-04-26 20:52:09] -rw------- 1 boinc boinc   1003520 Apr 26 20:52 result.tar.gz
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc      8517 Apr 26 20:52 runtime_log.err
[2026-04-26 20:52:09] -rw------- 1 boinc boinc       645 Apr 26 20:52 a523830a8ecf.diag
[2026-04-26 20:52:09] -rw-r--r-- 1 boinc boinc     21287 Apr 26 20:52 stderr.txt
[2026-04-26 20:52:09] HITS file was successfully produced:
[2026-04-26 20:52:09] -rw------- 1 boinc boinc 194462587 Apr 26 20:50 shared/HITS.pool.root.1
[2026-04-26 20:52:09]  *** Contents of shared directory: ***
[2026-04-26 20:52:09] insgesamt 408744
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc 222357526 Apr 26 18:41 ATLAS.root_0
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc     15667 Apr 26 18:41 start_atlas.sh
[2026-04-26 20:52:09] -rw-r--r-- 2 boinc boinc    697428 Apr 26 18:41 input.tar.gz
[2026-04-26 20:52:09] -rw------- 1 boinc boinc 194462587 Apr 26 20:50 HITS.pool.root.1
[2026-04-26 20:52:09] -rw------- 1 boinc boinc   1003520 Apr 26 20:52 result.tar.gz
20:52:11 (906536): run_atlas exited; CPU time 28504.501178
20:52:11 (906536): called boinc_finish(0)

</stderr_txt>
]]>

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