Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:11:34 (26383): wrapper (7.7.26015): starting
15:11:34 (26383): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 15:11:34] Arguments: --nthreads 8
[2026-04-25 15:11:34] Threads: 8
[2026-04-25 15:11:34] Checking for CVMFS
[2026-04-25 15:11:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 15:11:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 15:11:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 15:11:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 15:11:35] 2.11.2.0 2800 41284 82048 158859 2 1 14543099 20275201 1 130560 0 7200838 99.752 2419295 23448 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-25 15:11:35] CVMFS is ok
[2026-04-25 15:11:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 15:11:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 15:11:35] Further information can be found at the LHC@home message board.
[2026-04-25 15:11:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 15:11:35] Checking for apptainer binary...
[2026-04-25 15:11:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 15:11:35] Running /usr/bin/apptainer --version
[2026-04-25 15:11:35] apptainer version 1.3.2-1.el7
[2026-04-25 15:11:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 15:11:37] c-204-3.aglt2.org
[2026-04-25 15:11:37] apptainer works
[2026-04-25 15:11:37] Set ATHENA_PROC_NUMBER=8
[2026-04-25 15:11:37] Set ATHENA_CORE_NUMBER=8
[2026-04-25 15:11:37] Starting ATLAS job with PandaID=7105168909
[2026-04-25 15:11:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 18:44:37]  *** The last 200 lines of the pilot log: ***
[2026-04-25 18:44:37] 2026-04-25 22:44:05,182 | INFO     | fitting pss+swap vs Time
[2026-04-25 18:44:37] 2026-04-25 22:44:05,183 | INFO     | sum of square deviations: 2790348132.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,185 | INFO     | sum of deviations: 34165160691.499996
[2026-04-25 18:44:37] 2026-04-25 22:44:05,185 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,185 | INFO     | mean y: 2549810.3221153845
[2026-04-25 18:44:37] 2026-04-25 22:44:05,185 | INFO     | intersect: 2549810.3221153845
[2026-04-25 18:44:37] 2026-04-25 22:44:05,186 | INFO     | chi2: 1.6564223329232481
[2026-04-25 18:44:37] 2026-04-25 22:44:05,186 | INFO     | sufficient remaining disk space (14428405760 B)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,187 | INFO     | sum of square deviations: 2593916542.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,187 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,189 | INFO     | sum of deviations: 33316282465.000004
[2026-04-25 18:44:37] 2026-04-25 22:44:05,189 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,190 | INFO     | mean y: 2549151.172413793
[2026-04-25 18:44:37] 2026-04-25 22:44:05,190 | INFO     | intersect: 2549151.172413793
[2026-04-25 18:44:37] 2026-04-25 22:44:05,191 | INFO     | chi2: 1.6573125475038923
[2026-04-25 18:44:37] 2026-04-25 22:44:05,191 | INFO     | current chi2=1.6573125475038923 (change=-0.05374321288418952 %)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,192 | INFO     | right removable region: 202
[2026-04-25 18:44:37] 2026-04-25 22:44:05,192 | INFO     | sum of square deviations: 2593916542.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,194 | INFO     | sum of deviations: -3067781377.999999
[2026-04-25 18:44:37] 2026-04-25 22:44:05,194 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,194 | INFO     | mean y: 2578474.3201970444
[2026-04-25 18:44:37] 2026-04-25 22:44:05,194 | INFO     | intersect: 2578474.3201970444
[2026-04-25 18:44:37] 2026-04-25 22:44:05,195 | INFO     | chi2: 0.08691032948475491
[2026-04-25 18:44:37] 2026-04-25 22:44:05,195 | INFO     | current chi2=0.08691032948475491 (change=94.7531298173591 %)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,195 | INFO     | sum of square deviations: 2406926989.5
[2026-04-25 18:44:37] 2026-04-25 22:44:05,197 | INFO     | sum of deviations: -10580533508.999996
[2026-04-25 18:44:37] 2026-04-25 22:44:05,197 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,197 | INFO     | mean y: 2584553.212121212
[2026-04-25 18:44:37] 2026-04-25 22:44:05,197 | INFO     | intersect: 2584553.212121212
[2026-04-25 18:44:37] 2026-04-25 22:44:05,198 | INFO     | chi2: 0.01673218601429462
[2026-04-25 18:44:37] 2026-04-25 22:44:05,198 | INFO     | current chi2=0.01673218601429462 (change=80.74775908284913 %)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,198 | INFO     | sum of square deviations: 2229146912.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,199 | INFO     | sum of deviations: -10539129820.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,200 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,200 | INFO     | mean y: 2584512.10880829
[2026-04-25 18:44:37] 2026-04-25 22:44:05,200 | INFO     | intersect: 2584512.10880829
[2026-04-25 18:44:37] 2026-04-25 22:44:05,200 | INFO     | chi2: 0.01606140885458942
[2026-04-25 18:44:37] 2026-04-25 22:44:05,200 | INFO     | current chi2=0.01606140885458942 (change=4.008903314439271 %)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,201 | INFO     | left removable region: 15
[2026-04-25 18:44:37] 2026-04-25 22:44:05,201 | INFO     | sum of square deviations: 2027639878.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,202 | INFO     | sum of deviations: -10258639742.00003
[2026-04-25 18:44:37] 2026-04-25 22:44:05,202 | INFO     | mean x (centered): 0.0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,203 | INFO     | mean y: 2584766.92513369
[2026-04-25 18:44:37] 2026-04-25 22:44:05,203 | INFO     | intersect: 2584766.92513369
[2026-04-25 18:44:37] 2026-04-25 22:44:05,203 | INFO     | chi2: 0.01569496736232087
[2026-04-25 18:44:37] 2026-04-25 22:44:05,203 | INFO     | current memory leak: -5.06 B/s (using 187 data points, chi2=0.02)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,204 | INFO     | could have reported an average CPU frequency of 1695 MHz (11 samples)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,204 | INFO     | ..............................
[2026-04-25 18:44:37] 2026-04-25 22:44:05,204 | INFO     | . Timing measurements:
[2026-04-25 18:44:37] 2026-04-25 22:44:05,204 | INFO     | . get job = 0 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,204 | INFO     | . initial setup = 8 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | . payload setup = 18 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | . stage-in = 0 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | . payload execution = 12683 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | . stage-out = 2 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | . log creation = 0 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,205 | INFO     | ..............................
[2026-04-25 18:44:37] 2026-04-25 22:44:05,212 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-7105168909: 9463361 B (within 5033164800 B limit)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,228 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-7105168909/HITS.49820244._013525.pool.root.1 does not exist (skip from workdir size calculation)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,233 | INFO     | total size of present files: 0 B (workdir size: 9463361 B)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,244 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7105168909/HITS.49820244._013525.pool.root.1 since it does not exist
[2026-04-25 18:44:37] 2026-04-25 22:44:05,372 | INFO     | number of running child processes to parent process 2655: 1
[2026-04-25 18:44:37] 2026-04-25 22:44:05,372 | INFO     | maximum number of monitored processes: 6
[2026-04-25 18:44:37] 2026-04-25 22:44:05,373 | INFO     | aborting job monitoring since job object (job id=7105168909) has expired
[2026-04-25 18:44:37] 2026-04-25 22:44:05,676 | INFO     | 
[2026-04-25 18:44:37] 2026-04-25 22:44:05,676 | INFO     | job summary report
[2026-04-25 18:44:37] 2026-04-25 22:44:05,676 | INFO     | --------------------------------------------------
[2026-04-25 18:44:37] 2026-04-25 22:44:05,677 | INFO     | PanDA job id: 7105168909
[2026-04-25 18:44:37] 2026-04-25 22:44:05,677 | INFO     | task id: 49820244
[2026-04-25 18:44:37] 2026-04-25 22:44:05,677 | INFO     | errors: (none)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,677 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 18:44:37] 2026-04-25 22:44:05,677 | INFO     | pilot state: finished 
[2026-04-25 18:44:37] 2026-04-25 22:44:05,678 | INFO     | transexitcode: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,678 | INFO     | exeerrorcode: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,678 | INFO     | exeerrordiag: 
[2026-04-25 18:44:37] 2026-04-25 22:44:05,678 | INFO     | exitcode: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,678 | INFO     | exitmsg: OK
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | cpuconsumptiontime: 96094 s
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | nevents: 400
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | neventsw: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | pid: 2655
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | pgrp: 2655
[2026-04-25 18:44:37] 2026-04-25 22:44:05,679 | INFO     | corecount: 8
[2026-04-25 18:44:37] 2026-04-25 22:44:05,680 | INFO     | event service: False
[2026-04-25 18:44:37] 2026-04-25 22:44:05,680 | INFO     | sizes: {0: 2274805, 1: 2276407, 11: 2276407, 12703: 2306465, 12707: 2315463, 12708: 2315869}
[2026-04-25 18:44:37] 2026-04-25 22:44:05,680 | INFO     | --------------------------------------------------
[2026-04-25 18:44:37] 2026-04-25 22:44:05,680 | INFO     | 
[2026-04-25 18:44:37] 2026-04-25 22:44:05,680 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 18:44:37] 2026-04-25 22:44:05,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 18:44:37] 2026-04-25 22:44:05,714 | INFO     | job 7105168909 has completed (purged errors)
[2026-04-25 18:44:37] 2026-04-25 22:44:05,714 | INFO     | overall cleanup function is called
[2026-04-25 18:44:37] 2026-04-25 22:44:06,723 | INFO     | --- collectZombieJob: --- 10, [2655]
[2026-04-25 18:44:37] 2026-04-25 22:44:06,723 | INFO     | zombie collector waiting for pid 2655
[2026-04-25 18:44:37] 2026-04-25 22:44:06,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 18:44:37] 2026-04-25 22:44:06,723 | INFO     | collected zombie processes
[2026-04-25 18:44:37] 2026-04-25 22:44:06,724 | INFO     | will attempt to kill all subprocesses of pid=2655
[2026-04-25 18:44:37] 2026-04-25 22:44:06,802 | INFO     | process IDs to be killed: [2655] (in reverse order)
[2026-04-25 18:44:37] 2026-04-25 22:44:06,866 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 18:44:37] 2026-04-25 22:44:06,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 18:44:37] 2026-04-25 22:44:06,871 | INFO     | did not find any defunct processes belonging to 2655
[2026-04-25 18:44:37] 2026-04-25 22:44:06,875 | INFO     | did not find any defunct processes belonging to 2655
[2026-04-25 18:44:37] 2026-04-25 22:44:06,875 | INFO     | Ready for new job
[2026-04-25 18:44:37] 2026-04-25 22:44:06,878 | INFO     | ***************************************
[2026-04-25 18:44:37] 2026-04-25 22:44:06,879 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 18:44:37] 2026-04-25 22:44:06,879 | INFO     | ***************************************
[2026-04-25 18:44:37] 2026-04-25 22:44:06,879 | INFO     | 
[2026-04-25 18:44:37] 2026-04-25 22:44:06,880 | INFO     | architecture information:
[2026-04-25 18:44:37] 2026-04-25 22:44:06,881 | INFO     | executing command: cat /etc/os-release
[2026-04-25 18:44:37] 2026-04-25 22:44:06,899 | INFO     | cat /etc/os-release:
[2026-04-25 18:44:37] NAME="CentOS Linux"
[2026-04-25 18:44:37] VERSION="7 (Core)"
[2026-04-25 18:44:37] ID="centos"
[2026-04-25 18:44:37] ID_LIKE="rhel fedora"
[2026-04-25 18:44:37] VERSION_ID="7"
[2026-04-25 18:44:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 18:44:37] ANSI_COLOR="0;31"
[2026-04-25 18:44:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 18:44:37] HOME_URL="https://www.centos.org/"
[2026-04-25 18:44:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 18:44:37] 
[2026-04-25 18:44:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 18:44:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 18:44:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 18:44:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 18:44:37] 
[2026-04-25 18:44:37] 2026-04-25 22:44:06,899 | INFO     | ***************************************
[2026-04-25 18:44:37] 2026-04-25 22:44:07,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 18:44:37] 2026-04-25 22:44:07,422 | INFO     | sufficient remaining disk space (14438891520 B)
[2026-04-25 18:44:37] 2026-04-25 22:44:07,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 18:44:37] 2026-04-25 22:44:07,423 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 18:44:37] 2026-04-25 22:44:07,423 | INFO     | update_server=False
[2026-04-25 18:44:37] 2026-04-25 22:44:07,424 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 18:44:37] 2026-04-25 22:44:07,424 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 18:44:37] 2026-04-25 22:44:07,556 | INFO     | all payload control threads have been joined
[2026-04-25 18:44:37] 2026-04-25 22:44:07,876 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-25 18:44:37] 2026-04-25 22:44:07,876 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-25 18:44:37] 2026-04-25 22:44:07,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 18:44:37] 2026-04-25 22:44:07,877 | INFO     | will abort loop
[2026-04-25 18:44:37] 2026-04-25 22:44:08,429 | INFO     | [job] retrieve thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:08,459 | INFO     | all data control threads have been joined
[2026-04-25 18:44:37] 2026-04-25 22:44:08,562 | INFO     | [payload] control thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:08,590 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:08,882 | INFO     | [job] job monitor thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:08,990 | INFO     | all job control threads have been joined
[2026-04-25 18:44:37] 2026-04-25 22:44:09,133 | INFO     | job.realtimelogging is not enabled
[2026-04-25 18:44:37] 2026-04-25 22:44:09,170 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,178 | INFO     | [data] copytool_in thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,187 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,213 | INFO     | [payload] validate_post thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,247 | INFO     | [payload] failed_post thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,430 | INFO     | [data] copytool_out thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,463 | INFO     | [data] control thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,672 | INFO     | [job] validate thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:09,996 | INFO     | [job] control thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:10,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:10,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 18:44:37] 2026-04-25 22:44:10,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 18:44:37] 2026-04-25 22:44:11,318 | INFO     | [job] queue monitor thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:14,623 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 18:44:37] 2026-04-25 22:44:25,685 | INFO     | [monitor] cgroup control has ended
[2026-04-25 18:44:37] 2026-04-25 22:44:25,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139910710064960)>', '<ExcThread(monitor, started 139909859878656)>']
[2026-04-25 18:44:37] 2026-04-25 22:44:30,995 | INFO     | all workflow threads have been joined
[2026-04-25 18:44:37] 2026-04-25 22:44:31,000 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 18:44:37] 2026-04-25 22:44:31,000 | INFO     | traces error code: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:31,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 18:44:37] 2026-04-25 22:44:37,408 | INFO     | PID=30505 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-25 18:44:37] 2026-04-25 22:44:37,409 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 18:44:37] 2026-04-25 22:44:37,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 18:44:37] 2026-04-25 22:44:37,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 18:44:37] 2026-04-25 22:44:37,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 18:44:37] 2026-04-25 22:44:37,409 | INFO     | [monitor] control thread has ended
[2026-04-25 18:44:37] 2026-04-25 22:44:37,534 [wrapper] ==== pilot stdout END ====
[2026-04-25 18:44:37] 2026-04-25 22:44:37,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 18:44:37] 2026-04-25 22:44:37,543 [wrapper] pilotpid: 30505
[2026-04-25 18:44:37] 2026-04-25 22:44:37,548 [wrapper] Pilot exit status: 0
[2026-04-25 18:44:37] 2026-04-25 22:44:37,569 [wrapper] pandaids: 7105168909
[2026-04-25 18:44:37] 2026-04-25 22:44:37,614 [wrapper] cleanup supervisor_pilot 20496 30506
[2026-04-25 18:44:37] 2026-04-25 22:44:37,619 [wrapper] Test setup, not cleaning
[2026-04-25 18:44:37] 2026-04-25 22:44:37,624 [wrapper] apfmon messages muted
[2026-04-25 18:44:37] 2026-04-25 22:44:37,629 [wrapper] ==== wrapper stdout END ====
[2026-04-25 18:44:37] 2026-04-25 22:44:37,634 [wrapper] ==== wrapper stderr END ====
[2026-04-25 18:44:37]  *** Error codes and diagnostics ***
[2026-04-25 18:44:37]     "exeErrorCode": 0,
[2026-04-25 18:44:37]     "pilotErrorCode": 0,
[2026-04-25 18:44:37]  *** Listing of results directory ***
[2026-04-25 18:44:37] total 2455420
[2026-04-25 18:44:37] -rwx------ 1 boincer umatlas      36322 Apr 25 13:45 runpilot2-wrapper.sh
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas     683926 Apr 25 14:21 pilot3.tar.gz
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas       5631 Apr 25 15:07 queuedata.json
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas        100 Apr 25 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 18:44:37] -rwxr-xr-x 1 boincer umatlas       7986 Apr 25 15:11 run_atlas
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas        105 Apr 25 15:11 job.xml
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas 2236782835 Apr 25 15:11 EVNT.49820242._000039.pool.root.1
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas      15667 Apr 25 15:11 start_atlas.sh
[2026-04-25 18:44:37] drwxrwx--x 2 boincer umatlas       4096 Apr 25 15:11 shared
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas     697420 Apr 25 15:11 input.tar.gz
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas          0 Apr 25 15:11 boinc_lockfile
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas       2551 Apr 25 15:11 pandaJob.out
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas         57 Apr 25 15:11 setup.sh.local
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas     997243 Apr 25 15:11 agis_schedconf.cvmfs.json
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas        432 Apr 25 15:12 workernode_map.json
[2026-04-25 18:44:37] drwx------ 5 boincer umatlas       4096 Apr 25 15:12 pilot3
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas       5825 Apr 25 18:41 init_data.xml
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas  270028392 Apr 25 18:43 HITS.49820244._013525.pool.root.1
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas        489 Apr 25 18:43 boinc_task_state.xml
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas       1049 Apr 25 18:43 memory_monitor_summary.json
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas    1509089 Apr 25 18:44 agis_ddmendpoints.agis.ALL.json
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas         95 Apr 25 18:44 pilot_heartbeat.json
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas     545258 Apr 25 18:44 log.49820244._013525.job.log.tgz.1
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas       6427 Apr 25 18:44 heartbeat_new.json
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas       6318 Apr 25 18:44 heartbeat.json
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas       8192 Apr 25 18:44 boinc_mmap_file
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas         28 Apr 25 18:44 wrapper_checkpoint.txt
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas        745 Apr 25 18:44 pilotlog.txt
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas    1155694 Apr 25 18:44 log.49820244._013525.job.log.1
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas        357 Apr 25 18:44 output.list
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas        410 Apr 25 18:44 runtime_log
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas    1720320 Apr 25 18:44 result.tar.gz
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas       8960 Apr 25 18:44 runtime_log.err
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas        662 Apr 25 18:44 fdcf1778f302.diag
[2026-04-25 18:44:37] -rw-r--r-- 1 boincer umatlas      21225 Apr 25 18:44 stderr.txt
[2026-04-25 18:44:37] HITS file was successfully produced:
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas 270028392 Apr 25 18:43 shared/HITS.pool.root.1
[2026-04-25 18:44:37]  *** Contents of shared directory: ***
[2026-04-25 18:44:37] total 2450448
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas 2236782835 Apr 25 15:11 ATLAS.root_0
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas      15667 Apr 25 15:11 start_atlas.sh
[2026-04-25 18:44:37] -rw-r--r-- 2 boincer umatlas     697420 Apr 25 15:11 input.tar.gz
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas  270028392 Apr 25 18:43 HITS.pool.root.1
[2026-04-25 18:44:37] -rw------- 1 boincer umatlas    1720320 Apr 25 18:44 result.tar.gz
18:44:39 (26383): run_atlas exited; CPU time 96043.655731
18:44:39 (26383): called boinc_finish(0)

</stderr_txt>
]]>

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