Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:51:34 (16594): wrapper (7.7.26015): starting
13:51:34 (16594): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 13:51:35] Arguments: --nthreads 8
[2026-04-25 13:51:35] Threads: 8
[2026-04-25 13:51:35] Checking for CVMFS
[2026-04-25 13:51:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 13:51:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 13:51:35] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 13:51:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 13:51:35] 2.11.2.0 2786 47735 83048 158857 0 1 17635226 20275200 1 130560 0 8453238 99.919 1887378 18258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-25 13:51:35] CVMFS is ok
[2026-04-25 13:51:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 13:51:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 13:51:35] Further information can be found at the LHC@home message board.
[2026-04-25 13:51:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 13:51:35] Checking for apptainer binary...
[2026-04-25 13:51:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 13:51:35] Running /usr/bin/apptainer --version
[2026-04-25 13:51:35] apptainer version 1.3.2-1.el7
[2026-04-25 13:51:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 13:51:37] c-204-14.aglt2.org
[2026-04-25 13:51:37] apptainer works
[2026-04-25 13:51:37] Set ATHENA_PROC_NUMBER=8
[2026-04-25 13:51:37] Set ATHENA_CORE_NUMBER=8
[2026-04-25 13:51:37] Starting ATLAS job with PandaID=7100923136
[2026-04-25 13:51:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 17:37:46]  *** The last 200 lines of the pilot log: ***
[2026-04-25 17:37:46] 2026-04-25 21:37:12,488 | INFO     | stage-out finished correctly
[2026-04-25 17:37:46] 2026-04-25 21:37:12,747 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-25 17:37:46] 2026-04-25 21:37:14,202 | INFO     | monitor loop #1017: job 0:7100923136 is in state 'finished'
[2026-04-25 17:37:46] 2026-04-25 21:37:14,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,428 | INFO     | PID=20355 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-25 17:37:46] 2026-04-25 21:37:14,895 | INFO     | job 7100923136 has state=finished
[2026-04-25 17:37:46] 2026-04-25 21:37:14,896 | INFO     | preparing for final server update for job 7100923136 in state='finished'
[2026-04-25 17:37:46] 2026-04-25 21:37:14,897 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7100923136/jobReport.json
[2026-04-25 17:37:46] 2026-04-25 21:37:14,902 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-25 17:37:46] 2026-04-25 21:37:14,902 | INFO     | this job has now completed (state=finished)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,903 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,903 | INFO     | log transfer has been attempted: DONE
[2026-04-25 17:37:46] 2026-04-25 21:37:14,903 | INFO     | job 7100923136 has finished - writing final server update
[2026-04-25 17:37:46] 2026-04-25 21:37:14,904 | INFO     | total number of processed events: 400 (read)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,906 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7100923136/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,906 | INFO     | extracted standard info from prmon json
[2026-04-25 17:37:46] 2026-04-25 21:37:14,907 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 17:37:46] 2026-04-25 21:37:14,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 17:37:46] 2026-04-25 21:37:14,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 17:37:46] 2026-04-25 21:37:14,911 | INFO     | fitting pss+swap vs Time
[2026-04-25 17:37:46] 2026-04-25 21:37:14,912 | INFO     | sum of square deviations: 3346927870.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,913 | INFO     | sum of deviations: 39348679032.00001
[2026-04-25 17:37:46] 2026-04-25 21:37:14,913 | INFO     | mean x (centered): 0.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,914 | INFO     | mean y: 2548385.076923077
[2026-04-25 17:37:46] 2026-04-25 21:37:14,914 | INFO     | intersect: 2548385.076923077
[2026-04-25 17:37:46] 2026-04-25 21:37:14,914 | INFO     | chi2: 1.4845739061604974
[2026-04-25 17:37:46] 2026-04-25 21:37:14,915 | INFO     | sum of square deviations: 3124858590.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,916 | INFO     | sum of deviations: 38284880969.5
[2026-04-25 17:37:46] 2026-04-25 21:37:14,916 | INFO     | mean x (centered): 0.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,916 | INFO     | mean y: 2547654.421296296
[2026-04-25 17:37:46] 2026-04-25 21:37:14,916 | INFO     | intersect: 2547654.421296296
[2026-04-25 17:37:46] 2026-04-25 21:37:14,917 | INFO     | chi2: 1.485209962101507
[2026-04-25 17:37:46] 2026-04-25 21:37:14,917 | INFO     | current chi2=1.485209962101507 (change=-0.04284434330753333 %)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,917 | INFO     | right removable region: 215
[2026-04-25 17:37:46] 2026-04-25 21:37:14,917 | INFO     | sum of square deviations: 3124858590.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,919 | INFO     | sum of deviations: 5124736514.000002
[2026-04-25 17:37:46] 2026-04-25 21:37:14,919 | INFO     | mean x (centered): 0.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,919 | INFO     | mean y: 2571642.537037037
[2026-04-25 17:37:46] 2026-04-25 21:37:14,919 | INFO     | intersect: 2571642.537037037
[2026-04-25 17:37:46] 2026-04-25 21:37:14,919 | INFO     | chi2: 0.05987093421253187
[2026-04-25 17:37:46] 2026-04-25 21:37:14,920 | INFO     | current chi2=0.05987093421253187 (change=95.96713009947925 %)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,920 | INFO     | sum of square deviations: 2912836010.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,921 | INFO     | sum of deviations: 2542663488.0000014
[2026-04-25 17:37:46] 2026-04-25 21:37:14,921 | INFO     | mean x (centered): 0.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,921 | INFO     | mean y: 2573473.9763033176
[2026-04-25 17:37:46] 2026-04-25 21:37:14,922 | INFO     | intersect: 2573473.9763033176
[2026-04-25 17:37:46] 2026-04-25 21:37:14,922 | INFO     | chi2: 0.04558779051934312
[2026-04-25 17:37:46] 2026-04-25 21:37:14,922 | INFO     | current chi2=0.04558779051934312 (change=23.856557244431762 %)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,922 | INFO     | left removable region: 10
[2026-04-25 17:37:46] 2026-04-25 21:37:14,922 | INFO     | sum of square deviations: 2671343110.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,924 | INFO     | sum of deviations: 2293269868.000002
[2026-04-25 17:37:46] 2026-04-25 21:37:14,924 | INFO     | mean x (centered): 0.0
[2026-04-25 17:37:46] 2026-04-25 21:37:14,924 | INFO     | mean y: 2573284.951219512
[2026-04-25 17:37:46] 2026-04-25 21:37:14,924 | INFO     | intersect: 2573284.951219512
[2026-04-25 17:37:46] 2026-04-25 21:37:14,924 | INFO     | chi2: 0.04558474412064212
[2026-04-25 17:37:46] 2026-04-25 21:37:14,925 | INFO     | current memory leak: 0.86 B/s (using 205 data points, chi2=0.05)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,925 | INFO     | could have reported an average CPU frequency of 1762 MHz (11 samples)
[2026-04-25 17:37:46] 2026-04-25 21:37:14,925 | INFO     | ..............................
[2026-04-25 17:37:46] 2026-04-25 21:37:14,925 | INFO     | . Timing measurements:
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . get job = 0 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . initial setup = 8 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . payload setup = 16 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . stage-in = 0 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . payload execution = 13473 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . stage-out = 2 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | . log creation = 0 s
[2026-04-25 17:37:46] 2026-04-25 21:37:14,926 | INFO     | ..............................
[2026-04-25 17:37:46] 2026-04-25 21:37:15,029 | INFO     | 
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | job summary report
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | --------------------------------------------------
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | PanDA job id: 7100923136
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | task id: 49820375
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | errors: (none)
[2026-04-25 17:37:46] 2026-04-25 21:37:15,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 17:37:46] 2026-04-25 21:37:15,031 | INFO     | pilot state: finished 
[2026-04-25 17:37:46] 2026-04-25 21:37:15,031 | INFO     | transexitcode: 0
[2026-04-25 17:37:46] 2026-04-25 21:37:15,031 | INFO     | exeerrorcode: 0
[2026-04-25 17:37:46] 2026-04-25 21:37:15,031 | INFO     | exeerrordiag: 
[2026-04-25 17:37:46] 2026-04-25 21:37:15,031 | INFO     | exitcode: 0
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | exitmsg: OK
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | cpuconsumptiontime: 101504 s
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | nevents: 400
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | neventsw: 0
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | pid: 24785
[2026-04-25 17:37:46] 2026-04-25 21:37:15,032 | INFO     | pgrp: 24785
[2026-04-25 17:37:46] 2026-04-25 21:37:15,033 | INFO     | corecount: 8
[2026-04-25 17:37:46] 2026-04-25 21:37:15,033 | INFO     | event service: False
[2026-04-25 17:37:46] 2026-04-25 21:37:15,033 | INFO     | sizes: {0: 2274656, 1: 2276485, 11: 2276485, 13493: 2306818, 13497: 2315872, 13499: 2316010}
[2026-04-25 17:37:46] 2026-04-25 21:37:15,033 | INFO     | --------------------------------------------------
[2026-04-25 17:37:46] 2026-04-25 21:37:15,033 | INFO     | 
[2026-04-25 17:37:46] 2026-04-25 21:37:15,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 17:37:46] 2026-04-25 21:37:15,061 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,062 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,062 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,062 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 17:37:46] 2026-04-25 21:37:15,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,065 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 17:37:46] 2026-04-25 21:37:15,065 | INFO     | job 7100923136 has completed (purged errors)
[2026-04-25 17:37:46] 2026-04-25 21:37:15,066 | INFO     | overall cleanup function is called
[2026-04-25 17:37:46] 2026-04-25 21:37:16,071 | INFO     | --- collectZombieJob: --- 10, [24785]
[2026-04-25 17:37:46] 2026-04-25 21:37:16,071 | INFO     | zombie collector waiting for pid 24785
[2026-04-25 17:37:46] 2026-04-25 21:37:16,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 17:37:46] 2026-04-25 21:37:16,072 | INFO     | collected zombie processes
[2026-04-25 17:37:46] 2026-04-25 21:37:16,072 | INFO     | will attempt to kill all subprocesses of pid=24785
[2026-04-25 17:37:46] 2026-04-25 21:37:16,150 | INFO     | process IDs to be killed: [24785] (in reverse order)
[2026-04-25 17:37:46] 2026-04-25 21:37:16,219 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 17:37:46] 2026-04-25 21:37:16,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 17:37:46] 2026-04-25 21:37:16,223 | INFO     | did not find any defunct processes belonging to 24785
[2026-04-25 17:37:46] 2026-04-25 21:37:16,227 | INFO     | did not find any defunct processes belonging to 24785
[2026-04-25 17:37:46] 2026-04-25 21:37:16,227 | INFO     | Ready for new job
[2026-04-25 17:37:46] 2026-04-25 21:37:16,229 | INFO     | ***************************************
[2026-04-25 17:37:46] 2026-04-25 21:37:16,229 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 17:37:46] 2026-04-25 21:37:16,230 | INFO     | ***************************************
[2026-04-25 17:37:46] 2026-04-25 21:37:16,230 | INFO     | 
[2026-04-25 17:37:46] 2026-04-25 21:37:16,230 | INFO     | architecture information:
[2026-04-25 17:37:46] 2026-04-25 21:37:16,231 | INFO     | executing command: cat /etc/os-release
[2026-04-25 17:37:46] 2026-04-25 21:37:16,249 | INFO     | cat /etc/os-release:
[2026-04-25 17:37:46] NAME="CentOS Linux"
[2026-04-25 17:37:46] VERSION="7 (Core)"
[2026-04-25 17:37:46] ID="centos"
[2026-04-25 17:37:46] ID_LIKE="rhel fedora"
[2026-04-25 17:37:46] VERSION_ID="7"
[2026-04-25 17:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 17:37:47] ANSI_COLOR="0;31"
[2026-04-25 17:37:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 17:37:47] HOME_URL="https://www.centos.org/"
[2026-04-25 17:37:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 17:37:47] 
[2026-04-25 17:37:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 17:37:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 17:37:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 17:37:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 17:37:47] 
[2026-04-25 17:37:47] 2026-04-25 21:37:16,249 | INFO     | ***************************************
[2026-04-25 17:37:47] 2026-04-25 21:37:16,753 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 17:37:47] 2026-04-25 21:37:16,772 | INFO     | sufficient remaining disk space (14457765888 B)
[2026-04-25 17:37:47] 2026-04-25 21:37:16,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 17:37:47] 2026-04-25 21:37:16,772 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 17:37:47] 2026-04-25 21:37:16,773 | INFO     | update_server=False
[2026-04-25 17:37:47] 2026-04-25 21:37:16,773 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 17:37:47] 2026-04-25 21:37:16,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 17:37:47] 2026-04-25 21:37:16,912 | INFO     | all payload control threads have been joined
[2026-04-25 17:37:47] 2026-04-25 21:37:17,372 | INFO     | all data control threads have been joined
[2026-04-25 17:37:47] 2026-04-25 21:37:17,713 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 17:37:47] 2026-04-25 21:37:17,713 | INFO     | aborting loop
[2026-04-25 17:37:47] 2026-04-25 21:37:17,778 | INFO     | [job] retrieve thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:17,779 | INFO     | [job] queue monitor thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:17,850 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:17,917 | INFO     | [payload] control thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:17,977 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 17:37:47] 2026-04-25 21:37:18,141 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,176 | INFO     | all job control threads have been joined
[2026-04-25 17:37:47] 2026-04-25 21:37:18,177 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,190 | INFO     | [data] copytool_in thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,375 | INFO     | [data] control thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,416 | INFO     | [payload] validate_post thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,719 | INFO     | [job] job monitor thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:18,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 17:37:47] 2026-04-25 21:37:18,992 | INFO     | [payload] failed_post thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:19,086 | INFO     | [job] validate thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:19,181 | INFO     | [job] control thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:20,091 | INFO     | [data] copytool_out thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:22,846 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 17:37:47] 2026-04-25 21:37:26,604 | INFO     | [monitor] cgroup control has ended
[2026-04-25 17:37:47] 2026-04-25 21:37:28,550 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269361973056)>', '<ExcThread(monitor, started 140268196067072)>']
[2026-04-25 17:37:47] 2026-04-25 21:37:33,560 | INFO     | all workflow threads have been joined
[2026-04-25 17:37:47] 2026-04-25 21:37:33,560 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 17:37:47] 2026-04-25 21:37:33,561 | INFO     | traces error code: 0
[2026-04-25 17:37:47] 2026-04-25 21:37:33,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 17:37:47] 2026-04-25 21:37:46,627 | INFO     | PID=20355 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-25 17:37:47] 2026-04-25 21:37:46,628 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 17:37:47] 2026-04-25 21:37:46,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 17:37:47] 2026-04-25 21:37:46,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 17:37:47] 2026-04-25 21:37:46,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 17:37:47] 2026-04-25 21:37:46,629 | INFO     | [monitor] control thread has ended
[2026-04-25 17:37:47] 2026-04-25 21:37:46,751 [wrapper] ==== pilot stdout END ====
[2026-04-25 17:37:47] 2026-04-25 21:37:46,756 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 17:37:47] 2026-04-25 21:37:46,760 [wrapper] pilotpid: 20355
[2026-04-25 17:37:47] 2026-04-25 21:37:46,765 [wrapper] Pilot exit status: 0
[2026-04-25 17:37:47] 2026-04-25 21:37:46,784 [wrapper] pandaids: 7100923136
[2026-04-25 17:37:47] 2026-04-25 21:37:46,830 [wrapper] cleanup supervisor_pilot 21934 20356
[2026-04-25 17:37:47] 2026-04-25 21:37:46,835 [wrapper] Test setup, not cleaning
[2026-04-25 17:37:47] 2026-04-25 21:37:46,839 [wrapper] apfmon messages muted
[2026-04-25 17:37:47] 2026-04-25 21:37:46,844 [wrapper] ==== wrapper stdout END ====
[2026-04-25 17:37:47] 2026-04-25 21:37:46,848 [wrapper] ==== wrapper stderr END ====
[2026-04-25 17:37:47]  *** Error codes and diagnostics ***
[2026-04-25 17:37:47]     "exeErrorCode": 0,
[2026-04-25 17:37:47]     "pilotErrorCode": 0,
[2026-04-25 17:37:47]  *** Listing of results directory ***
[2026-04-25 17:37:47] total 2446056
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas     683926 Apr 25 13:45 pilot3.tar.gz
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas       5631 Apr 25 13:45 queuedata.json
[2026-04-25 17:37:47] -rwx------ 1 boincer umatlas      36322 Apr 25 13:45 runpilot2-wrapper.sh
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas        100 Apr 25 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 17:37:47] -rwxr-xr-x 1 boincer umatlas       7986 Apr 25 13:51 run_atlas
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas        105 Apr 25 13:51 job.xml
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas 2223969571 Apr 25 13:51 EVNT.49820373._000008.pool.root.1
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas      15667 Apr 25 13:51 start_atlas.sh
[2026-04-25 17:37:47] drwxrwx--x 2 boincer umatlas       4096 Apr 25 13:51 shared
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas     697409 Apr 25 13:51 input.tar.gz
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas          0 Apr 25 13:51 boinc_lockfile
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas       2582 Apr 25 13:51 pandaJob.out
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas         57 Apr 25 13:51 setup.sh.local
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas     997243 Apr 25 13:51 agis_schedconf.cvmfs.json
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas        432 Apr 25 13:52 workernode_map.json
[2026-04-25 17:37:47] drwx------ 5 boincer umatlas       4096 Apr 25 13:52 pilot3
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas       5825 Apr 25 17:28 init_data.xml
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas  273317103 Apr 25 17:36 HITS.49820375._000586.pool.root.1
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas        490 Apr 25 17:36 boinc_task_state.xml
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas       1063 Apr 25 17:37 memory_monitor_summary.json
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas    1509089 Apr 25 17:37 agis_ddmendpoints.agis.ALL.json
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas     444582 Apr 25 17:37 log.49820375._000586.job.log.tgz.1
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas       6425 Apr 25 17:37 heartbeat_new.json
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas       6316 Apr 25 17:37 heartbeat.json
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas       8192 Apr 25 17:37 boinc_mmap_file
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas         95 Apr 25 17:37 pilot_heartbeat.json
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas        745 Apr 25 17:37 pilotlog.txt
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas    1224667 Apr 25 17:37 log.49820375._000586.job.log.1
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas         29 Apr 25 17:37 wrapper_checkpoint.txt
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas        357 Apr 25 17:37 output.list
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas        410 Apr 25 17:37 runtime_log
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas    1689600 Apr 25 17:37 result.tar.gz
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas       8965 Apr 25 17:37 runtime_log.err
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas        664 Apr 25 17:37 fdcd2cf68948.diag
[2026-04-25 17:37:47] -rw-r--r-- 1 boincer umatlas      21279 Apr 25 17:37 stderr.txt
[2026-04-25 17:37:47] HITS file was successfully produced:
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas 273317103 Apr 25 17:36 shared/HITS.pool.root.1
[2026-04-25 17:37:47]  *** Contents of shared directory: ***
[2026-04-25 17:37:47] total 2441120
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas 2223969571 Apr 25 13:51 ATLAS.root_0
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas      15667 Apr 25 13:51 start_atlas.sh
[2026-04-25 17:37:47] -rw-r--r-- 2 boincer umatlas     697409 Apr 25 13:51 input.tar.gz
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas  273317103 Apr 25 17:36 HITS.pool.root.1
[2026-04-25 17:37:47] -rw------- 1 boincer umatlas    1689600 Apr 25 17:37 result.tar.gz
17:37:48 (16594): run_atlas exited; CPU time 101441.026069
17:37:48 (16594): called boinc_finish(0)

</stderr_txt>
]]>

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