Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:01 (546049): wrapper (7.7.26015): starting
21:45:01 (546049): wrapper: running run_atlas (--nthreads 12)
[2026-04-25 21:45:01] Arguments: --nthreads 12
[2026-04-25 21:45:01] Threads: 12
[2026-04-25 21:45:01] Checking for CVMFS
[2026-04-25 21:45:01] No cvmfs_config command found, will try listing directly
[2026-04-25 21:45:01] CVMFS is ok
[2026-04-25 21:45:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 21:45:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 21:45:01] Further information can be found at the LHC@home message board.
[2026-04-25 21:45:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 21:45:01] Checking for apptainer binary...
[2026-04-25 21:45:01] which: no apptainer in ((null))
[2026-04-25 21:45:01] apptainer is not installed, using version from CVMFS
[2026-04-25 21:45:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 21:45:01] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot84/slots/12/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-04-25 21:45:01] apptainer works
[2026-04-25 21:45:01] Set ATHENA_PROC_NUMBER=12
[2026-04-25 21:45:01] Set ATHENA_CORE_NUMBER=12
[2026-04-25 21:45:01] Starting ATLAS job with PandaID=7114605765
[2026-04-25 21:45:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot84/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 22:10:28]  *** The last 200 lines of the pilot log: ***
[2026-04-25 22:10:28]  direct_access_wan=False
[2026-04-25 22:10:28]  domain=
[2026-04-25 22:10:28]  filesize=1581477
[2026-04-25 22:10:28]  filetype=log
[2026-04-25 22:10:28]  guid=3f45a3c9-ec01-4c15-a355-91c8fd1894aa
[2026-04-25 22:10:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-25 22:10:28]  is_altstaged=None
[2026-04-25 22:10:28]  is_tar=False
[2026-04-25 22:10:28]  lfn=log.49148172._000017.job.log.tgz.1
[2026-04-25 22:10:28]  mtime=0
[2026-04-25 22:10:28]  protocol_id=None
[2026-04-25 22:10:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-25 22:10:28]  replicas=None
[2026-04-25 22:10:28]  scope=mc16_13TeV
[2026-04-25 22:10:28]  status=None
[2026-04-25 22:10:28]  status_code=0
[2026-04-25 22:10:28]  storage_token=
[2026-04-25 22:10:28]  surl=/var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/log.49148172._000017.job.log.tgz.1
[2026-04-25 22:10:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/b7/50/log.49148172._000017.job.log.tgz.1
[2026-04-25 22:10:28]  workdir=None
[2026-04-25 22:10:28] ]
[2026-04-25 22:10:28] 2026-04-25 20:09:54,549 | INFO     | transferring file log.49148172._000017.job.log.tgz.1 from /var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/log.49148172._000017.job.log.tgz.1 to /var/lib/
[2026-04-25 22:10:28] 2026-04-25 20:09:54,549 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/log.49148172._000017.job.log.tgz.1 /var/lib/boinc/var/slot84/slots/12/
[2026-04-25 22:10:28] 2026-04-25 20:09:54,567 | INFO     | adding to output.list: log.49148172._000017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/b7/50/log.49148172._000017.job.log.tgz.
[2026-04-25 22:10:28] 2026-04-25 20:09:54,567 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-25 22:10:28] 2026-04-25 20:09:54,568 | INFO     | summary of transferred files:
[2026-04-25 22:10:28] 2026-04-25 20:09:54,568 | INFO     |  -- lfn=log.49148172._000017.job.log.tgz.1, status_code=0, status=transferred
[2026-04-25 22:10:28] 2026-04-25 20:09:54,568 | INFO     | stage-out finished correctly
[2026-04-25 22:10:28] 2026-04-25 20:09:56,214 | WARNING  | process 556935 can no longer be monitored (due to stat problems) - aborting
[2026-04-25 22:10:28] 2026-04-25 20:09:56,214 | INFO     | using path: /var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 22:10:28] 2026-04-25 20:09:56,373 | INFO     | number of running child processes to parent process 556935: 1
[2026-04-25 22:10:28] 2026-04-25 20:09:56,373 | INFO     | maximum number of monitored processes: 18
[2026-04-25 22:10:28] 2026-04-25 20:09:56,980 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-25 22:10:28] 2026-04-25 20:09:57,116 | INFO     | job 7114605765 has state=finished
[2026-04-25 22:10:28] 2026-04-25 20:09:57,117 | INFO     | preparing for final server update for job 7114605765 in state='finished'
[2026-04-25 22:10:28] 2026-04-25 20:09:57,117 | INFO     | reading metadata from: /var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/jobReport.json
[2026-04-25 22:10:28] 2026-04-25 20:09:57,118 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot84/slots/12/workernode_map.json
[2026-04-25 22:10:28] 2026-04-25 20:09:57,118 | INFO     | this job has now completed (state=finished)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,118 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,118 | INFO     | log transfer has been attempted: DONE
[2026-04-25 22:10:28] 2026-04-25 20:09:57,118 | INFO     | job 7114605765 has finished - writing final server update
[2026-04-25 22:10:28] 2026-04-25 20:09:57,119 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3053692/.job.ad'
[2026-04-25 22:10:28] 2026-04-25 20:09:57,119 | INFO     | total number of processed events: 150 (read)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,128 | INFO     | using path: /var/lib/boinc/var/slot84/slots/12/PanDA_Pilot-7114605765/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,128 | INFO     | extracted standard info from prmon json
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | fitting pss+swap vs Time
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | sum of square deviations: 1518168.0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | sum of deviations: 62499929.0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | mean x (centered): 0.0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | mean y: 3451102.529411765
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | intersect: 3451102.529411765
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | chi2: 0.03608245788266852
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | current memory leak: 41.17 B/s (using 17 data points, chi2=0.04)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | could have reported an average CPU frequency of 3640 MHz (4 samples)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,129 | INFO     | ..............................
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . Timing measurements:
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . get job = 0 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . initial setup = 2 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . payload setup = 5 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . stage-in = 0 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . payload execution = 1464 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . stage-out = 0 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | . log creation = 0 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,130 | INFO     | ..............................
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | 
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | job summary report
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | --------------------------------------------------
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | PanDA job id: 7114605765
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | task id: 49148172
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | errors: (none)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | pilot state: finished 
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | transexitcode: 0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | exeerrorcode: 0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | exeerrordiag: 
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | exitcode: 0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | exitmsg: OK
[2026-04-25 22:10:28] 2026-04-25 20:09:57,154 | INFO     | cpuconsumptiontime: 14642 s
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | nevents: 150
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | neventsw: 0
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | pid: 556935
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | pgrp: 556935
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | corecount: 12
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | event service: False
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | sizes: {0: 2277132, 11: 2277132, 1473: 2302784, 1474: 2311802, 1477: 2312104}
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | --------------------------------------------------
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | 
[2026-04-25 22:10:28] 2026-04-25 20:09:57,155 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot84/slots/12
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | job 7114605765 has completed (purged errors)
[2026-04-25 22:10:28] 2026-04-25 20:09:57,171 | INFO     | overall cleanup function is called
[2026-04-25 22:10:28] 2026-04-25 20:09:58,181 | INFO     | --- collectZombieJob: --- 10, [556935]
[2026-04-25 22:10:28] 2026-04-25 20:09:58,181 | INFO     | zombie collector waiting for pid 556935
[2026-04-25 22:10:28] 2026-04-25 20:09:58,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 22:10:28] 2026-04-25 20:09:58,181 | INFO     | collected zombie processes
[2026-04-25 22:10:28] 2026-04-25 20:09:58,181 | INFO     | will attempt to kill all subprocesses of pid=556935
[2026-04-25 22:10:28] 2026-04-25 20:09:58,340 | INFO     | process IDs to be killed: [556935] (in reverse order)
[2026-04-25 22:10:28] 2026-04-25 20:09:58,426 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 22:10:28] 2026-04-25 20:09:58,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 22:10:28] 2026-04-25 20:09:58,442 | INFO     | did not find any defunct processes belonging to 556935
[2026-04-25 22:10:28] 2026-04-25 20:09:58,451 | INFO     | did not find any defunct processes belonging to 556935
[2026-04-25 22:10:28] 2026-04-25 20:09:58,451 | INFO     | Ready for new job
[2026-04-25 22:10:28] 2026-04-25 20:09:58,452 | INFO     | ***************************************
[2026-04-25 22:10:28] 2026-04-25 20:09:58,452 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 22:10:28] 2026-04-25 20:09:58,452 | INFO     | ***************************************
[2026-04-25 22:10:28] 2026-04-25 20:09:58,452 | INFO     | 
[2026-04-25 22:10:28] 2026-04-25 20:09:58,455 | INFO     | architecture information:
[2026-04-25 22:10:28] 2026-04-25 20:09:58,456 | INFO     | executing command: cat /etc/os-release
[2026-04-25 22:10:28] 2026-04-25 20:09:58,462 | INFO     | cat /etc/os-release:
[2026-04-25 22:10:28] NAME="CentOS Linux"
[2026-04-25 22:10:28] VERSION="7 (Core)"
[2026-04-25 22:10:28] ID="centos"
[2026-04-25 22:10:28] ID_LIKE="rhel fedora"
[2026-04-25 22:10:28] VERSION_ID="7"
[2026-04-25 22:10:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 22:10:28] ANSI_COLOR="0;31"
[2026-04-25 22:10:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 22:10:28] HOME_URL="https://www.centos.org/"
[2026-04-25 22:10:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 22:10:28] 
[2026-04-25 22:10:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 22:10:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 22:10:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 22:10:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 22:10:28] 
[2026-04-25 22:10:28] 2026-04-25 20:09:58,462 | INFO     | ***************************************
[2026-04-25 22:10:28] 2026-04-25 20:09:58,964 | INFO     | executing command: df -mP /var/lib/boinc/var/slot84/slots/12
[2026-04-25 22:10:28] 2026-04-25 20:09:58,981 | INFO     | sufficient remaining disk space (298483449856 B)
[2026-04-25 22:10:28] 2026-04-25 20:09:58,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 22:10:28] 2026-04-25 20:09:58,981 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 22:10:28] 2026-04-25 20:09:58,981 | INFO     | update_server=False
[2026-04-25 22:10:28] 2026-04-25 20:09:58,981 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 22:10:28] 2026-04-25 20:09:58,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 22:10:28] 2026-04-25 20:09:58,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 22:10:28] 2026-04-25 20:09:59,359 | INFO     | all payload control threads have been joined
[2026-04-25 22:10:28] 2026-04-25 20:09:59,571 | INFO     | all data control threads have been joined
[2026-04-25 22:10:28] 2026-04-25 20:09:59,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 22:10:28] 2026-04-25 20:09:59,882 | INFO     | aborting loop
[2026-04-25 22:10:28] 2026-04-25 20:09:59,986 | INFO     | [job] retrieve thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:09:59,986 | INFO     | [job] queue monitor thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 22:10:28] 2026-04-25 20:10:00,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,267 | INFO     | [payload] validate_post thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,364 | INFO     | [payload] control thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,393 | INFO     | [payload] failed_post thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,475 | INFO     | all job control threads have been joined
[2026-04-25 22:10:28] 2026-04-25 20:10:00,577 | INFO     | [data] control thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,632 | INFO     | [job] validate thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,744 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,790 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,887 | INFO     | [job] job monitor thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:00,899 | INFO     | [data] copytool_in thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:01,324 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:01,483 | INFO     | [job] control thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:02,103 | INFO     | [data] copytool_out thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:02,988 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 22:10:28] 2026-04-25 20:10:10,497 | INFO     | [monitor] cgroup control has ended
[2026-04-25 22:10:28] 2026-04-25 20:10:12,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22886740444992)>', '<ExcThread(monitor, started 22886504216320)>']
[2026-04-25 22:10:28] 2026-04-25 20:10:17,140 | INFO     | all workflow threads have been joined
[2026-04-25 22:10:28] 2026-04-25 20:10:17,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 22:10:28] 2026-04-25 20:10:17,140 | INFO     | traces error code: 0
[2026-04-25 22:10:28] 2026-04-25 20:10:17,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | INFO     | PID=551175 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | INFO     | .. there are 6 such processes running
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 22:10:28] 2026-04-25 20:10:28,643 | CRITICAL | thread 'MainThread' is not alive
[2026-04-25 22:10:28] 2026-04-25 20:10:28,644 | INFO     | [monitor] control thread has ended
[2026-04-25 22:10:28] 2026-04-25 20:10:28,712 [wrapper] ==== pilot stdout END ====
[2026-04-25 22:10:28] 2026-04-25 20:10:28,715 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 22:10:28] 2026-04-25 20:10:28,717 [wrapper] pilotpid: 551175
[2026-04-25 22:10:28] 2026-04-25 20:10:28,719 [wrapper] Pilot exit status: 0
[2026-04-25 22:10:28] 2026-04-25 20:10:28,725 [wrapper] pandaids: 7114605765
[2026-04-25 22:10:28] 2026-04-25 20:10:28,795 [wrapper] cleanup supervisor_pilot  640297 551176
[2026-04-25 22:10:28] 2026-04-25 20:10:28,798 [wrapper] Test setup, not cleaning
[2026-04-25 22:10:28] 2026-04-25 20:10:28,799 [wrapper] apfmon messages muted
[2026-04-25 22:10:28] 2026-04-25 20:10:28,801 [wrapper] ==== wrapper stdout END ====
[2026-04-25 22:10:28] 2026-04-25 20:10:28,802 [wrapper] ==== wrapper stderr END ====
[2026-04-25 22:10:28]  *** Error codes and diagnostics ***
[2026-04-25 22:10:28]     "exeErrorCode": 0,
[2026-04-25 22:10:28]     "pilotErrorCode": 0,
[2026-04-25 22:10:28]  *** Listing of results directory ***
[2026-04-25 22:10:28] total 459788
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-25 22:10:28] -rwx------. 1 boinc boinc     36322 Apr 25 14:01 runpilot2-wrapper.sh
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:09 queuedata.json
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc       100 Apr 25 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 22:10:28] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 21:44 run_atlas
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc       105 Apr 25 21:44 job.xml
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc     15667 Apr 25 21:45 start_atlas.sh
[2026-04-25 22:10:28] drwxrwx--x. 2 boinc boinc      4096 Apr 25 21:45 shared
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc    697553 Apr 25 21:45 input.tar.gz
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc      6629 Apr 25 21:45 init_data.xml
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc 334577155 Apr 25 21:45 EVNT.49148164._000001.pool.root.1
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc         0 Apr 25 21:45 boinc_lockfile
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc      2931 Apr 25 21:45 pandaJob.out
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc    997235 Apr 25 21:45 agis_schedconf.cvmfs.json
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc   1509089 Apr 25 21:45 agis_ddmendpoints.agis.ALL.json
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc       444 Apr 25 21:45 workernode_map.json
[2026-04-25 22:10:28] drwx------. 5 boinc boinc      4096 Apr 25 21:45 pilot3
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc       487 Apr 25 22:06 boinc_task_state.xml
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc        95 Apr 25 22:09 pilot_heartbeat.json
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc 128562176 Apr 25 22:09 HITS.49148172._000017.pool.root.1
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc      1038 Apr 25 22:09 memory_monitor_summary.json
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc   1581477 Apr 25 22:09 log.49148172._000017.job.log.tgz.1
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc      6986 Apr 25 22:09 heartbeat_new.json
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc      6877 Apr 25 22:09 heartbeat.json
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc      8192 Apr 25 22:10 boinc_mmap_file
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc        27 Apr 25 22:10 wrapper_checkpoint.txt
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc       891 Apr 25 22:10 pilotlog.txt
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc    195830 Apr 25 22:10 log.49148172._000017.job.log.1
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc       353 Apr 25 22:10 output.list
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc       410 Apr 25 22:10 runtime_log
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc   1792000 Apr 25 22:10 result.tar.gz
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc      8846 Apr 25 22:10 runtime_log.err
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc       660 Apr 25 22:10 ad1ad20d76ce.diag
[2026-04-25 22:10:28] -rw-r--r--. 1 boinc boinc     20876 Apr 25 22:10 stderr.txt
[2026-04-25 22:10:28] HITS file was successfully produced:
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc 128562176 Apr 25 22:09 shared/HITS.pool.root.1
[2026-04-25 22:10:28]  *** Contents of shared directory: ***
[2026-04-25 22:10:28] total 454748
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc     15667 Apr 25 21:45 start_atlas.sh
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc    697553 Apr 25 21:45 input.tar.gz
[2026-04-25 22:10:28] -rw-r--r--. 2 boinc boinc 334577155 Apr 25 21:45 ATLAS.root_0
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc 128562176 Apr 25 22:09 HITS.pool.root.1
[2026-04-25 22:10:28] -rw-------. 1 boinc boinc   1792000 Apr 25 22:10 result.tar.gz
22:10:30 (546049): run_atlas exited; CPU time 14634.503127
22:10:30 (546049): called boinc_finish(0)

</stderr_txt>
]]>

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