Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:27:37 (2345619): wrapper (7.7.26015): starting
22:27:37 (2345619): wrapper: running run_atlas (--nthreads 12)
[2026-04-25 22:27:37] Arguments: --nthreads 12
[2026-04-25 22:27:37] Threads: 12
[2026-04-25 22:27:37] Checking for CVMFS
[2026-04-25 22:27:37] No cvmfs_config command found, will try listing directly
[2026-04-25 22:27:37] CVMFS is ok
[2026-04-25 22:27:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 22:27:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 22:27:37] Further information can be found at the LHC@home message board.
[2026-04-25 22:27:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 22:27:37] Checking for apptainer binary...
[2026-04-25 22:27:37] which: no apptainer in ((null))
[2026-04-25 22:27:37] apptainer is not installed, using version from CVMFS
[2026-04-25 22:27:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 22:27:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-04-25 22:27:37] apptainer works
[2026-04-25 22:27:37] Set ATHENA_PROC_NUMBER=12
[2026-04-25 22:27:37] Set ATHENA_CORE_NUMBER=12
[2026-04-25 22:27:37] Starting ATLAS job with PandaID=7097870228
[2026-04-25 22:27:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 22:49:30]  *** The last 200 lines of the pilot log: ***
[2026-04-25 22:49:30]  filetype=log
[2026-04-25 22:49:30]  guid=3fb6df31-8499-4128-9054-dc66dd08cfed
[2026-04-25 22:49:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-25 22:49:30]  is_altstaged=None
[2026-04-25 22:49:30]  is_tar=False
[2026-04-25 22:49:30]  lfn=log.49545114._029693.job.log.tgz.1
[2026-04-25 22:49:30]  mtime=0
[2026-04-25 22:49:30]  protocol_id=None
[2026-04-25 22:49:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-25 22:49:30]  replicas=None
[2026-04-25 22:49:30]  scope=mc23_13p6TeV
[2026-04-25 22:49:30]  status=None
[2026-04-25 22:49:30]  status_code=0
[2026-04-25 22:49:30]  storage_token=
[2026-04-25 22:49:30]  surl=/var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7097870228/log.49545114._029693.job.log.tgz.1
[2026-04-25 22:49:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/81/log.49545114._029693.job.log.tgz.1
[2026-04-25 22:49:30]  workdir=None
[2026-04-25 22:49:30] ]
[2026-04-25 22:49:30] 2026-04-25 20:48:28,235 | INFO     | transferring file log.49545114._029693.job.log.tgz.1 from /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7097870228/log.49545114._029693.job.log.tgz.1 to /var/lib/
[2026-04-25 22:49:30] 2026-04-25 20:48:28,235 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7097870228/log.49545114._029693.job.log.tgz.1 /var/lib/boinc/var/slot108/slots/1/
[2026-04-25 22:49:30] 2026-04-25 20:48:28,250 | INFO     | adding to output.list: log.49545114._029693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/81/log.49545114._029693.job.log.tg
[2026-04-25 22:49:30] 2026-04-25 20:48:28,250 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-25 22:49:30] 2026-04-25 20:48:28,250 | INFO     | summary of transferred files:
[2026-04-25 22:49:30] 2026-04-25 20:48:28,250 | INFO     |  -- lfn=log.49545114._029693.job.log.tgz.1, status_code=0, status=transferred
[2026-04-25 22:49:30] 2026-04-25 20:48:28,250 | INFO     | stage-out finished correctly
[2026-04-25 22:49:30] 2026-04-25 20:48:30,330 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-25 22:49:30] 2026-04-25 20:48:33,353 | INFO     | job 7097870228 has state=finished
[2026-04-25 22:49:30] 2026-04-25 20:48:33,356 | INFO     | preparing for final server update for job 7097870228 in state='finished'
[2026-04-25 22:49:30] 2026-04-25 20:48:33,356 | INFO     | reading metadata from: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7097870228/jobReport.json
[2026-04-25 22:49:30] 2026-04-25 20:48:33,358 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot108/slots/1/workernode_map.json
[2026-04-25 22:49:30] 2026-04-25 20:48:33,358 | INFO     | this job has now completed (state=finished)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,359 | INFO     | log transfer has been attempted: DONE
[2026-04-25 22:49:30] 2026-04-25 20:48:33,359 | INFO     | job 7097870228 has finished - writing final server update
[2026-04-25 22:49:30] 2026-04-25 20:48:33,359 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2253303/.job.ad'
[2026-04-25 22:49:30] 2026-04-25 20:48:33,359 | INFO     | total number of processed events: 400 (read)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,383 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/PanDA_Pilot-7097870228/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,383 | INFO     | extracted standard info from prmon json
[2026-04-25 22:49:30] 2026-04-25 20:48:33,384 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 22:49:30] 2026-04-25 20:48:33,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 22:49:30] 2026-04-25 20:48:33,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | fitting pss+swap vs Time
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | sum of square deviations: 846527.5
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | sum of deviations: -6595777.499999998
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | mean x (centered): 0.0
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | mean y: 2804092.9285714286
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | intersect: 2804092.9285714286
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | chi2: 0.00010081796040755197
[2026-04-25 22:49:30] 2026-04-25 20:48:33,385 | INFO     | current memory leak: -7.79 B/s (using 14 data points, chi2=0.00)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | could have reported an average CPU frequency of 3679 MHz (4 samples)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | ..............................
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . Timing measurements:
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . get job = 0 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . initial setup = 3 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . payload setup = 4 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . stage-in = 0 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . payload execution = 1223 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . stage-out = 0 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | . log creation = 0 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,386 | INFO     | ..............................
[2026-04-25 22:49:30] 2026-04-25 20:48:33,429 | INFO     | 
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | job summary report
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | --------------------------------------------------
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | PanDA job id: 7097870228
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | task id: 49545114
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | errors: (none)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | pilot state: finished 
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | transexitcode: 0
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | exeerrorcode: 0
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | exeerrordiag: 
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | exitcode: 0
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | exitmsg: OK
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | cpuconsumptiontime: 12686 s
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | nevents: 400
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | neventsw: 0
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | pid: 2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | pgrp: 2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | corecount: 12
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | event service: False
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | sizes: {0: 2274833, 1: 2276463, 11: 2276491, 1230: 2301132, 1232: 2310154, 1234: 2310210, 1237: 2310532}
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | --------------------------------------------------
[2026-04-25 22:49:30] 2026-04-25 20:48:33,430 | INFO     | 
[2026-04-25 22:49:30] 2026-04-25 20:48:33,431 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot108/slots/1
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | job 7097870228 has completed (purged errors)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,448 | INFO     | overall cleanup function is called
[2026-04-25 22:49:30] 2026-04-25 20:48:33,499 | WARNING  | process 2356032 can no longer be monitored (due to stat problems) - aborting
[2026-04-25 22:49:30] 2026-04-25 20:48:33,661 | INFO     | using path: /var/lib/boinc/var/slot108/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 22:49:30] 2026-04-25 20:48:33,858 | INFO     | number of running child processes to parent process 2356032: 1
[2026-04-25 22:49:30] 2026-04-25 20:48:33,858 | INFO     | maximum number of monitored processes: 6
[2026-04-25 22:49:30] 2026-04-25 20:48:33,858 | INFO     | aborting job monitoring since job object (job id=7097870228) has expired
[2026-04-25 22:49:30] 2026-04-25 20:48:34,456 | INFO     | --- collectZombieJob: --- 10, [2356032]
[2026-04-25 22:49:30] 2026-04-25 20:48:34,456 | INFO     | zombie collector waiting for pid 2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:34,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 22:49:30] 2026-04-25 20:48:34,456 | INFO     | collected zombie processes
[2026-04-25 22:49:30] 2026-04-25 20:48:34,456 | INFO     | will attempt to kill all subprocesses of pid=2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:34,672 | INFO     | process IDs to be killed: [2356032] (in reverse order)
[2026-04-25 22:49:30] 2026-04-25 20:48:34,769 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 22:49:30] 2026-04-25 20:48:34,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 22:49:30] 2026-04-25 20:48:34,790 | INFO     | did not find any defunct processes belonging to 2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:34,807 | INFO     | did not find any defunct processes belonging to 2356032
[2026-04-25 22:49:30] 2026-04-25 20:48:34,807 | INFO     | Ready for new job
[2026-04-25 22:49:30] 2026-04-25 20:48:34,809 | INFO     | **************************************
[2026-04-25 22:49:30] 2026-04-25 20:48:34,809 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-25 22:49:30] 2026-04-25 20:48:34,809 | INFO     | **************************************
[2026-04-25 22:49:30] 2026-04-25 20:48:34,809 | INFO     | 
[2026-04-25 22:49:30] 2026-04-25 20:48:34,814 | INFO     | architecture information:
[2026-04-25 22:49:30] 2026-04-25 20:48:34,814 | INFO     | executing command: cat /etc/os-release
[2026-04-25 22:49:30] 2026-04-25 20:48:34,827 | INFO     | cat /etc/os-release:
[2026-04-25 22:49:30] NAME="CentOS Linux"
[2026-04-25 22:49:30] VERSION="7 (Core)"
[2026-04-25 22:49:30] ID="centos"
[2026-04-25 22:49:30] ID_LIKE="rhel fedora"
[2026-04-25 22:49:30] VERSION_ID="7"
[2026-04-25 22:49:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 22:49:30] ANSI_COLOR="0;31"
[2026-04-25 22:49:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 22:49:30] HOME_URL="https://www.centos.org/"
[2026-04-25 22:49:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 22:49:30] 
[2026-04-25 22:49:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 22:49:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 22:49:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 22:49:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 22:49:30] 
[2026-04-25 22:49:30] 2026-04-25 20:48:34,827 | INFO     | **************************************
[2026-04-25 22:49:30] 2026-04-25 20:48:35,330 | INFO     | executing command: df -mP /var/lib/boinc/var/slot108/slots/1
[2026-04-25 22:49:30] 2026-04-25 20:48:35,343 | INFO     | sufficient remaining disk space (196583882752 B)
[2026-04-25 22:49:30] 2026-04-25 20:48:35,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 22:49:30] 2026-04-25 20:48:35,343 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 22:49:30] 2026-04-25 20:48:35,343 | INFO     | update_server=False
[2026-04-25 22:49:30] 2026-04-25 20:48:35,343 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 22:49:30] 2026-04-25 20:48:35,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 22:49:30] 2026-04-25 20:48:35,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 22:49:30] 2026-04-25 20:48:35,344 | INFO     | aborting loop
[2026-04-25 22:49:30] 2026-04-25 20:48:35,470 | INFO     | all data control threads have been joined
[2026-04-25 22:49:30] 2026-04-25 20:48:36,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 22:49:30] 2026-04-25 20:48:36,342 | INFO     | all job control threads have been joined
[2026-04-25 22:49:30] 2026-04-25 20:48:36,348 | INFO     | [job] retrieve thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,349 | INFO     | [job] queue monitor thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,350 | INFO     | [job] job monitor thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,378 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 22:49:30] 2026-04-25 20:48:36,465 | INFO     | [payload] failed_post thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,476 | INFO     | [data] control thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,527 | INFO     | all payload control threads have been joined
[2026-04-25 22:49:30] 2026-04-25 20:48:36,744 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,823 | INFO     | [job] validate thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,841 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:36,876 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:37,010 | INFO     | [data] copytool_in thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:37,348 | INFO     | [job] control thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:37,388 | INFO     | [payload] validate_post thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:37,533 | INFO     | [payload] control thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:37,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:38,294 | INFO     | [data] copytool_out thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:40,384 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 22:49:30] 2026-04-25 20:48:46,689 | INFO     | [monitor] cgroup control has ended
[2026-04-25 22:49:30] 2026-04-25 20:48:47,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22985801070400)>', '<ExcThread(monitor, started 22985556887296)>']
[2026-04-25 22:49:30] 2026-04-25 20:48:52,924 | INFO     | all workflow threads have been joined
[2026-04-25 22:49:30] 2026-04-25 20:48:52,924 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 22:49:30] 2026-04-25 20:48:52,924 | INFO     | traces error code: 0
[2026-04-25 22:49:30] 2026-04-25 20:48:52,924 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | INFO     | PID=2350165 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | INFO     | .. there are 6 such processes running
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | CRITICAL | thread 'MainThread' is not alive
[2026-04-25 22:49:30] 2026-04-25 20:49:05,088 | INFO     | [monitor] control thread has ended
[2026-04-25 22:49:30] 2026-04-25 20:49:05,199 [wrapper] ==== pilot stdout END ====
[2026-04-25 22:49:30] 2026-04-25 20:49:05,202 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 22:49:30] 2026-04-25 20:49:05,204 [wrapper] pilotpid: 2350165
[2026-04-25 22:49:30] 2026-04-25 20:49:05,206 [wrapper] Pilot exit status: 0
[2026-04-25 22:49:30] 2026-04-25 20:49:05,212 [wrapper] pandaids: 7097870228
[2026-04-25 22:49:30] 2026-04-25 20:49:05,287 [wrapper] cleanup supervisor_pilot 2413868 2350166
[2026-04-25 22:49:30] 2026-04-25 20:49:05,289 [wrapper] Test setup, not cleaning
[2026-04-25 22:49:30] 2026-04-25 20:49:05,291 [wrapper] apfmon messages muted
[2026-04-25 22:49:30] 2026-04-25 20:49:05,292 [wrapper] ==== wrapper stdout END ====
[2026-04-25 22:49:30] 2026-04-25 20:49:05,294 [wrapper] ==== wrapper stderr END ====
[2026-04-25 22:49:30]  *** Error codes and diagnostics ***
[2026-04-25 22:49:30]     "exeErrorCode": 0,
[2026-04-25 22:49:30]     "pilotErrorCode": 0,
[2026-04-25 22:49:30]  *** Listing of results directory ***
[2026-04-25 22:49:30] total 459304
[2026-04-25 22:49:30] -rwx------. 1 boinc boinc     36322 Apr 18 10:52 runpilot2-wrapper.sh
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc    644190 Apr 18 11:00 pilot3.tar.gz
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc      5094 Apr 18 11:06 queuedata.json
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc       100 Apr 25 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 22:49:30] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 22:27 run_atlas
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc       105 Apr 25 22:27 job.xml
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc     15665 Apr 25 22:27 start_atlas.sh
[2026-04-25 22:49:30] drwxrwx--x. 2 boinc boinc      4096 Apr 25 22:27 shared
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc    656945 Apr 25 22:27 input.tar.gz
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc      6630 Apr 25 22:27 init_data.xml
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc 280437354 Apr 25 22:27 EVNT.49539591._000478.pool.root.1
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc         0 Apr 25 22:27 boinc_lockfile
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc      2605 Apr 25 22:27 pandaJob.out
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc    997227 Apr 25 22:27 agis_schedconf.cvmfs.json
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc   1509089 Apr 25 22:27 agis_ddmendpoints.agis.ALL.json
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc       444 Apr 25 22:27 workernode_map.json
[2026-04-25 22:49:30] drwx------. 5 boinc boinc      4096 Apr 25 22:27 pilot3
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc        95 Apr 25 22:48 pilot_heartbeat.json
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc       486 Apr 25 22:48 boinc_task_state.xml
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc 184870305 Apr 25 22:48 HITS.49545114._029693.pool.root.1
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc      1028 Apr 25 22:48 memory_monitor_summary.json
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc    313334 Apr 25 22:48 log.49545114._029693.job.log.tgz.1
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc      6367 Apr 25 22:48 heartbeat_new.json
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc      6258 Apr 25 22:48 heartbeat.json
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc       892 Apr 25 22:49 pilotlog.txt
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc    167200 Apr 25 22:49 log.49545114._029693.job.log.1
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc       357 Apr 25 22:49 output.list
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc       410 Apr 25 22:49 runtime_log
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc    501760 Apr 25 22:49 result.tar.gz
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc      8845 Apr 25 22:49 runtime_log.err
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc       656 Apr 25 22:49 4659791e065f.diag
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc        26 Apr 25 22:49 wrapper_checkpoint.txt
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc      8192 Apr 25 22:49 boinc_mmap_file
[2026-04-25 22:49:30] -rw-r--r--. 1 boinc boinc     21121 Apr 25 22:49 stderr.txt
[2026-04-25 22:49:30] HITS file was successfully produced:
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc 184870305 Apr 25 22:48 shared/HITS.pool.root.1
[2026-04-25 22:49:30]  *** Contents of shared directory: ***
[2026-04-25 22:49:30] total 455568
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc     15665 Apr 25 22:27 start_atlas.sh
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc    656945 Apr 25 22:27 input.tar.gz
[2026-04-25 22:49:30] -rw-r--r--. 2 boinc boinc 280437354 Apr 25 22:27 ATLAS.root_0
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc 184870305 Apr 25 22:48 HITS.pool.root.1
[2026-04-25 22:49:30] -rw-------. 1 boinc boinc    501760 Apr 25 22:49 result.tar.gz
22:49:31 (2345619): run_atlas exited; CPU time 12715.633926
22:49:31 (2345619): called boinc_finish(0)

</stderr_txt>
]]>

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