Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:20:19 (3937766): wrapper (7.7.26015): starting
00:20:19 (3937766): wrapper: running run_atlas (--nthreads 4)
[2026-04-26 00:20:19] Arguments: --nthreads 4
[2026-04-26 00:20:19] Threads: 4
[2026-04-26 00:20:19] Checking for CVMFS
[2026-04-26 00:20:19] No cvmfs_config command found, will try listing directly
[2026-04-26 00:20:19] CVMFS is ok
[2026-04-26 00:20:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-26 00:20:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-26 00:20:19] Further information can be found at the LHC@home message board.
[2026-04-26 00:20:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 00:20:19] Checking for apptainer binary...
[2026-04-26 00:20:19] which: no apptainer in ((null))
[2026-04-26 00:20:19] apptainer is not installed, using version from CVMFS
[2026-04-26 00:20:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 00:20:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-26 00:20:19] apptainer works
[2026-04-26 00:20:19] Set ATHENA_PROC_NUMBER=4
[2026-04-26 00:20:19] Set ATHENA_CORE_NUMBER=4
[2026-04-26 00:20:19] Starting ATLAS job with PandaID=7114612633
[2026-04-26 00:20:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 03:08:57]  *** The last 200 lines of the pilot log: ***
[2026-04-26 03:08:57] 2026-04-26 01:07:49,135 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot112/slots/1/workernode_map.json
[2026-04-26 03:08:57] 2026-04-26 01:07:49,135 | INFO     | this job has now completed (state=finished)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,135 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,135 | INFO     | log transfer has been attempted: DONE
[2026-04-26 03:08:57] 2026-04-26 01:07:49,135 | INFO     | job 7114612633 has finished - writing final server update
[2026-04-26 03:08:57] 2026-04-26 01:07:49,136 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_10029/.job.ad'
[2026-04-26 03:08:57] 2026-04-26 01:07:49,136 | INFO     | total number of processed events: 400 (read)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,152 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7114612633/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,152 | INFO     | extracted standard info from prmon json
[2026-04-26 03:08:57] 2026-04-26 01:07:49,152 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 03:08:57] 2026-04-26 01:07:49,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 03:08:57] 2026-04-26 01:07:49,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | fitting pss+swap vs Time
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | sum of square deviations: 1367709365.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | sum of deviations: 313730594.5
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | mean x (centered): 0.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | mean y: 2364150.25
[2026-04-26 03:08:57] 2026-04-26 01:07:49,155 | INFO     | intersect: 2364150.25
[2026-04-26 03:08:57] 2026-04-26 01:07:49,156 | INFO     | chi2: 1.1065944959884424
[2026-04-26 03:08:57] 2026-04-26 01:07:49,156 | INFO     | sum of square deviations: 1246386160.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,156 | INFO     | sum of deviations: 427418460.000002
[2026-04-26 03:08:57] 2026-04-26 01:07:49,156 | INFO     | mean x (centered): 0.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,156 | INFO     | mean y: 2364293.106918239
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | intersect: 2364293.106918239
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | chi2: 1.1068954610293034
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | current chi2=1.1068954610293034 (change=-0.02719740988700083 %)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | right removable region: 158
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | sum of square deviations: 1246386160.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | sum of deviations: -14259917051.999996
[2026-04-26 03:08:57] 2026-04-26 01:07:49,157 | INFO     | mean x (centered): 0.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | mean y: 2382061.7672955976
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | intersect: 2382061.7672955976
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | chi2: 0.025320598327804505
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | current chi2=0.025320598327804505 (change=97.71184490618785 %)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | sum of square deviations: 1132458442.5
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | sum of deviations: -12316750278.999998
[2026-04-26 03:08:57] 2026-04-26 01:07:49,158 | INFO     | mean x (centered): 0.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | mean y: 2379472.8051948054
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | intersect: 2379472.8051948054
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | chi2: 0.023989319980772583
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | current chi2=0.023989319980772583 (change=5.257689134344222 %)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | left removable region: 10
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | sum of square deviations: 1005179777.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | sum of deviations: -11755217127.499998
[2026-04-26 03:08:57] 2026-04-26 01:07:49,159 | INFO     | mean x (centered): 0.0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | mean y: 2380280.560810811
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | intersect: 2380280.560810811
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | chi2: 0.022941938062670007
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | current memory leak: -11.69 B/s (using 148 data points, chi2=0.02)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | could have reported an average CPU frequency of 2771 MHz (9 samples)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | ..............................
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . Timing measurements:
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . get job = 0 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . initial setup = 6 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . payload setup = 11 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . stage-in = 0 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . payload execution = 10003 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . stage-out = 0 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,160 | INFO     | . log creation = 0 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,161 | INFO     | ..............................
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | 
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | job summary report
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | --------------------------------------------------
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | PanDA job id: 7114612633
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | task id: 49863714
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | errors: (none)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,216 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | pilot state: finished 
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | transexitcode: 0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | exeerrorcode: 0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | exeerrordiag: 
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | exitcode: 0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | exitmsg: OK
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | cpuconsumptiontime: 38711 s
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | nevents: 400
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | neventsw: 0
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | pid: 3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | pgrp: 3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | corecount: 4
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | event service: False
[2026-04-26 03:08:57] 2026-04-26 01:07:49,217 | INFO     | sizes: {0: 2274842, 1: 2276500, 11: 2276500, 10018: 2305002, 10019: 2305001, 10020: 2314263, 10021: 2314465}
[2026-04-26 03:08:57] 2026-04-26 01:07:49,218 | INFO     | --------------------------------------------------
[2026-04-26 03:08:57] 2026-04-26 01:07:49,218 | INFO     | 
[2026-04-26 03:08:57] 2026-04-26 01:07:49,218 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-04-26 03:08:57] 2026-04-26 01:07:49,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | job 7114612633 has completed (purged errors)
[2026-04-26 03:08:57] 2026-04-26 01:07:49,242 | INFO     | overall cleanup function is called
[2026-04-26 03:08:57] 2026-04-26 01:07:49,697 | WARNING  | process 3956809 can no longer be monitored (due to stat problems) - aborting
[2026-04-26 03:08:57] 2026-04-26 01:07:50,005 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 03:08:57] 2026-04-26 01:07:50,252 | INFO     | --- collectZombieJob: --- 10, [3956809]
[2026-04-26 03:08:57] 2026-04-26 01:07:50,252 | INFO     | zombie collector waiting for pid 3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:50,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 03:08:57] 2026-04-26 01:07:50,252 | INFO     | collected zombie processes
[2026-04-26 03:08:57] 2026-04-26 01:07:50,252 | INFO     | will attempt to kill all subprocesses of pid=3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:50,466 | INFO     | number of running child processes to parent process 3956809: 1
[2026-04-26 03:08:57] 2026-04-26 01:07:50,466 | INFO     | maximum number of monitored processes: 6
[2026-04-26 03:08:57] 2026-04-26 01:07:50,466 | INFO     | aborting job monitoring since job object (job id=7114612633) has expired
[2026-04-26 03:08:57] 2026-04-26 01:07:50,811 | INFO     | process IDs to be killed: [3956809] (in reverse order)
[2026-04-26 03:08:57] 2026-04-26 01:07:50,981 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 03:08:57] 2026-04-26 01:07:50,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 03:08:57] 2026-04-26 01:07:51,001 | INFO     | did not find any defunct processes belonging to 3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:51,014 | INFO     | did not find any defunct processes belonging to 3956809
[2026-04-26 03:08:57] 2026-04-26 01:07:51,014 | INFO     | Ready for new job
[2026-04-26 03:08:57] 2026-04-26 01:07:51,016 | INFO     | ***************************************
[2026-04-26 03:08:57] 2026-04-26 01:07:51,016 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 03:08:57] 2026-04-26 01:07:51,016 | INFO     | ***************************************
[2026-04-26 03:08:57] 2026-04-26 01:07:51,016 | INFO     | 
[2026-04-26 03:08:57] 2026-04-26 01:07:51,021 | INFO     | architecture information:
[2026-04-26 03:08:57] 2026-04-26 01:07:51,021 | INFO     | executing command: cat /etc/os-release
[2026-04-26 03:08:57] 2026-04-26 01:07:51,037 | INFO     | cat /etc/os-release:
[2026-04-26 03:08:57] NAME="CentOS Linux"
[2026-04-26 03:08:57] VERSION="7 (Core)"
[2026-04-26 03:08:57] ID="centos"
[2026-04-26 03:08:57] ID_LIKE="rhel fedora"
[2026-04-26 03:08:57] VERSION_ID="7"
[2026-04-26 03:08:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 03:08:57] ANSI_COLOR="0;31"
[2026-04-26 03:08:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 03:08:57] HOME_URL="https://www.centos.org/"
[2026-04-26 03:08:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 03:08:57] 
[2026-04-26 03:08:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 03:08:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 03:08:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 03:08:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 03:08:57] 
[2026-04-26 03:08:57] 2026-04-26 01:07:51,037 | INFO     | ***************************************
[2026-04-26 03:08:57] 2026-04-26 01:07:51,540 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-04-26 03:08:57] 2026-04-26 01:07:51,558 | INFO     | sufficient remaining disk space (247457644544 B)
[2026-04-26 03:08:57] 2026-04-26 01:07:51,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 03:08:57] 2026-04-26 01:07:51,559 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 03:08:57] 2026-04-26 01:07:51,559 | INFO     | update_server=False
[2026-04-26 03:08:57] 2026-04-26 01:07:51,559 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 03:08:57] 2026-04-26 01:07:51,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 03:08:57] 2026-04-26 01:07:51,560 | INFO     | aborting loop
[2026-04-26 03:08:57] 2026-04-26 01:07:52,216 | INFO     | all payload control threads have been joined
[2026-04-26 03:08:57] 2026-04-26 01:07:52,329 | INFO     | all data control threads have been joined
[2026-04-26 03:08:57] 2026-04-26 01:07:52,444 | INFO     | all job control threads have been joined
[2026-04-26 03:08:57] 2026-04-26 01:07:52,561 | INFO     | [job] retrieve thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:52,565 | INFO     | [job] job monitor thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:52,781 | INFO     | [job] validate thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:52,959 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,040 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 03:08:57] 2026-04-26 01:07:53,040 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,221 | INFO     | [payload] control thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,235 | INFO     | [data] copytool_in thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,334 | INFO     | [data] control thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,390 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,450 | INFO     | [job] control thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,467 | INFO     | [payload] failed_post thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:53,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 03:08:57] 2026-04-26 01:07:54,043 | INFO     | [payload] validate_post thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:54,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 03:08:57] 2026-04-26 01:07:55,046 | INFO     | [data] copytool_out thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:55,232 | INFO     | [job] queue monitor thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:07:57,975 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:08:02,210 | INFO     | job.realtimelogging is not enabled
[2026-04-26 03:08:57] 2026-04-26 01:08:03,215 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 03:08:57] 2026-04-26 01:08:21,487 | INFO     | PID=3944992 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-26 03:08:57] 2026-04-26 01:08:21,487 | INFO     | .. there are 9 such processes running
[2026-04-26 03:08:57] 2026-04-26 01:08:21,488 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 03:08:57] 2026-04-26 01:08:21,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 03:08:57] 2026-04-26 01:08:21,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 03:08:57] 2026-04-26 01:08:50,822 | INFO     | [monitor] cgroup control has ended
[2026-04-26 03:08:57] 2026-04-26 01:08:52,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22406507738944)>', '<ExcThread(monitor, started 22406262683392)>']
[2026-04-26 03:08:57] 2026-04-26 01:08:52,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 03:08:57] 2026-04-26 01:08:52,642 | INFO     | [monitor] control thread has ended
[2026-04-26 03:08:57] 2026-04-26 01:08:57,358 | INFO     | all workflow threads have been joined
[2026-04-26 03:08:57] 2026-04-26 01:08:57,358 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 03:08:57] 2026-04-26 01:08:57,359 | INFO     | traces error code: 0
[2026-04-26 03:08:57] 2026-04-26 01:08:57,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 03:08:57] 2026-04-26 01:08:57,479 [wrapper] ==== pilot stdout END ====
[2026-04-26 03:08:57] 2026-04-26 01:08:57,481 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 03:08:57] 2026-04-26 01:08:57,483 [wrapper] pilotpid: 3944992
[2026-04-26 03:08:57] 2026-04-26 01:08:57,485 [wrapper] Pilot exit status: 0
[2026-04-26 03:08:57] 2026-04-26 01:08:57,495 [wrapper] pandaids: 7114612633
[2026-04-26 03:08:57] 2026-04-26 01:08:57,620 [wrapper] cleanup supervisor_pilot   62699 3944993
[2026-04-26 03:08:57] 2026-04-26 01:08:57,623 [wrapper] Test setup, not cleaning
[2026-04-26 03:08:57] 2026-04-26 01:08:57,625 [wrapper] apfmon messages muted
[2026-04-26 03:08:57] 2026-04-26 01:08:57,627 [wrapper] ==== wrapper stdout END ====
[2026-04-26 03:08:57] 2026-04-26 01:08:57,629 [wrapper] ==== wrapper stderr END ====
[2026-04-26 03:08:57]  *** Error codes and diagnostics ***
[2026-04-26 03:08:57]     "exeErrorCode": 0,
[2026-04-26 03:08:57]     "pilotErrorCode": 0,
[2026-04-26 03:08:57]  *** Listing of results directory ***
[2026-04-26 03:08:57] total 470436
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-26 03:08:57] -rwx------. 1 boinc boinc     36322 Apr 25 14:14 runpilot2-wrapper.sh
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:18 queuedata.json
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc       100 Apr 26 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 03:08:57] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 00:20 run_atlas
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc       105 Apr 26 00:20 job.xml
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc 258959364 Apr 26 00:20 EVNT.49863712._000009.pool.root.1
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc      6541 Apr 26 00:20 init_data.xml
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc     15667 Apr 26 00:20 start_atlas.sh
[2026-04-26 03:08:57] drwxrwx--x. 2 boinc boinc      4096 Apr 26 00:20 shared
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc    697409 Apr 26 00:20 input.tar.gz
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc         0 Apr 26 00:20 boinc_lockfile
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc      2575 Apr 26 00:20 pandaJob.out
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc    997533 Apr 26 00:20 agis_schedconf.cvmfs.json
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc   1509089 Apr 26 00:20 agis_ddmendpoints.agis.ALL.json
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc       444 Apr 26 00:20 workernode_map.json
[2026-04-26 03:08:57] drwx------. 5 boinc boinc      4096 Apr 26 00:20 pilot3
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc 216189329 Apr 26 03:07 HITS.49863714._000211.pool.root.1
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc       487 Apr 26 03:07 boinc_task_state.xml
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc      1030 Apr 26 03:07 memory_monitor_summary.json
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc    294244 Apr 26 03:07 log.49863714._000211.job.log.tgz.1
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc      6369 Apr 26 03:07 heartbeat_new.json
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc      6260 Apr 26 03:07 heartbeat.json
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc        95 Apr 26 03:08 pilot_heartbeat.json
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc        27 Apr 26 03:08 wrapper_checkpoint.txt
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc      8192 Apr 26 03:08 boinc_mmap_file
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc      4905 Apr 26 03:08 pilotlog.txt
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc    929735 Apr 26 03:08 log.49863714._000211.job.log.1
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc       357 Apr 26 03:08 output.list
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc       410 Apr 26 03:08 runtime_log
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc   1239040 Apr 26 03:08 result.tar.gz
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc      8845 Apr 26 03:08 runtime_log.err
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc       664 Apr 26 03:08 b0137450dab8.diag
[2026-04-26 03:08:57] -rw-r--r--. 1 boinc boinc     21067 Apr 26 03:08 stderr.txt
[2026-04-26 03:08:57] HITS file was successfully produced:
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc 216189329 Apr 26 03:07 shared/HITS.pool.root.1
[2026-04-26 03:08:57]  *** Contents of shared directory: ***
[2026-04-26 03:08:57] total 465936
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc 258959364 Apr 26 00:20 ATLAS.root_0
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc     15667 Apr 26 00:20 start_atlas.sh
[2026-04-26 03:08:57] -rw-r--r--. 2 boinc boinc    697409 Apr 26 00:20 input.tar.gz
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc 216189329 Apr 26 03:07 HITS.pool.root.1
[2026-04-26 03:08:57] -rw-------. 1 boinc boinc   1239040 Apr 26 03:08 result.tar.gz
03:08:59 (3937766): run_atlas exited; CPU time 39202.257909
03:08:59 (3937766): called boinc_finish(0)

</stderr_txt>
]]>

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