Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:43 (29005): wrapper (7.7.26015): starting
20:04:43 (29005): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 20:04:43] Arguments: --nthreads 8
[2026-04-25 20:04:43] Threads: 8
[2026-04-25 20:04:43] Checking for CVMFS
[2026-04-25 20:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 20:04:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 20:04:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 20:04:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 20:04:48] 2.11.2.0 21948 14461 98248 158857 1 54 21514302 25165825 96 130560 0 3011932 99.714 1947754 5632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-25 20:04:48] CVMFS is ok
[2026-04-25 20:04:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 20:04:48] Checking for apptainer binary...
[2026-04-25 20:04:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 20:04:48] Running /usr/bin/apptainer --version
[2026-04-25 20:04:48] apptainer version 1.3.2-1.el7
[2026-04-25 20:04:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 20:05:24] cg-vwn393.simple-grid.lan
[2026-04-25 20:05:24] apptainer works
[2026-04-25 20:05:24] Set ATHENA_PROC_NUMBER=8
[2026-04-25 20:05:24] Set ATHENA_CORE_NUMBER=8
[2026-04-25 20:05:24] Starting ATLAS job with PandaID=7114618139
[2026-04-25 20:05:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 00:36:50]  *** The last 200 lines of the pilot log: ***
[2026-04-26 00:36:50] 2026-04-25 22:35:49,719 | INFO     | this job has now completed (state=finished)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,719 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,719 | INFO     | log transfer has been attempted: DONE
[2026-04-26 00:36:50] 2026-04-25 22:35:49,719 | INFO     | job 7114618139 has finished - writing final server update
[2026-04-26 00:36:50] 2026-04-25 22:35:49,719 | INFO     | total number of processed events: 400 (read)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,721 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7114618139/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,721 | INFO     | extracted standard info from prmon json
[2026-04-26 00:36:50] 2026-04-25 22:35:49,721 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 00:36:50] 2026-04-25 22:35:49,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 00:36:50] 2026-04-25 22:35:49,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 00:36:50] 2026-04-25 22:35:49,725 | INFO     | fitting pss+swap vs Time
[2026-04-26 00:36:50] 2026-04-25 22:35:49,725 | INFO     | sum of square deviations: 5081276667.5
[2026-04-26 00:36:50] 2026-04-25 22:35:49,727 | INFO     | sum of deviations: 102797319804.00003
[2026-04-26 00:36:50] 2026-04-25 22:35:49,727 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,727 | INFO     | mean y: 2475420.9921259843
[2026-04-26 00:36:50] 2026-04-25 22:35:49,727 | INFO     | intersect: 2475420.9921259843
[2026-04-26 00:36:50] 2026-04-25 22:35:49,727 | INFO     | chi2: 9.273150505875451
[2026-04-26 00:36:50] 2026-04-25 22:35:49,728 | INFO     | sum of square deviations: 4787066500.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,729 | INFO     | sum of deviations: 117617186538.99998
[2026-04-26 00:36:50] 2026-04-25 22:35:49,729 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,729 | INFO     | mean y: 2482962.2168674697
[2026-04-26 00:36:50] 2026-04-25 22:35:49,729 | INFO     | intersect: 2482962.2168674697
[2026-04-26 00:36:50] 2026-04-25 22:35:49,729 | INFO     | chi2: 8.588755312627937
[2026-04-26 00:36:50] 2026-04-25 22:35:49,730 | INFO     | current chi2=8.588755312627937 (change=7.380395614347926 %)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,730 | INFO     | right removable region: 248
[2026-04-26 00:36:50] 2026-04-25 22:35:49,730 | INFO     | sum of square deviations: 4787066500.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,731 | INFO     | sum of deviations: 10797749019.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,731 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,731 | INFO     | mean y: 2523088.7309236946
[2026-04-26 00:36:50] 2026-04-25 22:35:49,731 | INFO     | intersect: 2523088.7309236946
[2026-04-26 00:36:50] 2026-04-25 22:35:49,732 | INFO     | chi2: 3.9307386883058726
[2026-04-26 00:36:50] 2026-04-25 22:35:49,732 | INFO     | current chi2=3.9307386883058726 (change=57.61161553653892 %)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,732 | INFO     | sum of square deviations: 4504437945.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,733 | INFO     | sum of deviations: -57832139520.99999
[2026-04-26 00:36:50] 2026-04-25 22:35:49,733 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,733 | INFO     | mean y: 2560062.581967213
[2026-04-26 00:36:50] 2026-04-25 22:35:49,733 | INFO     | intersect: 2560062.581967213
[2026-04-26 00:36:50] 2026-04-25 22:35:49,734 | INFO     | chi2: 1.1274099136220297
[2026-04-26 00:36:50] 2026-04-25 22:35:49,734 | INFO     | current chi2=1.1274099136220297 (change=71.31811593133561 %)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,734 | INFO     | sum of square deviations: 4233158440.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,735 | INFO     | sum of deviations: -68641899317.99999
[2026-04-26 00:36:50] 2026-04-25 22:35:49,735 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,735 | INFO     | mean y: 2566100.0376569037
[2026-04-26 00:36:50] 2026-04-25 22:35:49,735 | INFO     | intersect: 2566100.0376569037
[2026-04-26 00:36:50] 2026-04-25 22:35:49,736 | INFO     | chi2: 1.0001980627203009
[2026-04-26 00:36:50] 2026-04-25 22:35:49,736 | INFO     | current chi2=1.0001980627203009 (change=11.283549076931152 %)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,736 | INFO     | left removable region: 15
[2026-04-26 00:36:50] 2026-04-25 22:35:49,736 | INFO     | sum of square deviations: 3922276332.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,737 | INFO     | sum of deviations: -51147464159.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,737 | INFO     | mean x (centered): 0.0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,737 | INFO     | mean y: 2576199.7424892704
[2026-04-26 00:36:50] 2026-04-25 22:35:49,737 | INFO     | intersect: 2576199.7424892704
[2026-04-26 00:36:50] 2026-04-25 22:35:49,738 | INFO     | chi2: 0.2095776258321651
[2026-04-26 00:36:50] 2026-04-25 22:35:49,738 | INFO     | current memory leak: -13.04 B/s (using 233 data points, chi2=0.21)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,738 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,738 | INFO     | ..............................
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . Timing measurements:
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . get job = 0 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . initial setup = 116 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . payload setup = 266 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . stage-in = 0 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . payload execution = 15580 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . stage-out = 3 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | . log creation = 1 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,739 | INFO     | ..............................
[2026-04-26 00:36:50] 2026-04-25 22:35:49,815 | INFO     | 
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | job summary report
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | --------------------------------------------------
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | PanDA job id: 7114618139
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | task id: 49860592
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | errors: (none)
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | pilot state: finished 
[2026-04-26 00:36:50] 2026-04-25 22:35:49,816 | INFO     | transexitcode: 0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | exeerrorcode: 0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | exeerrordiag: 
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | exitcode: 0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | exitmsg: OK
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | cpuconsumptiontime: 58290 s
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | nevents: 400
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | neventsw: 0
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | pid: 5070
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | pgrp: 5070
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | corecount: 8
[2026-04-26 00:36:50] 2026-04-25 22:35:49,817 | INFO     | event service: False
[2026-04-26 00:36:50] 2026-04-25 22:35:49,818 | INFO     | sizes: {0: 2273915, 1: 2274600, 2: 2276429, 13: 2276429, 15850: 2307741, 15855: 2316739, 15858: 2316923, 15861: 2317117}
[2026-04-26 00:36:50] 2026-04-25 22:35:49,818 | INFO     | --------------------------------------------------
[2026-04-26 00:36:50] 2026-04-25 22:35:49,818 | INFO     | 
[2026-04-26 00:36:50] 2026-04-25 22:35:49,818 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-04-26 00:36:50] 2026-04-25 22:35:50,372 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,372 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,372 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,372 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,373 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 00:36:50] 2026-04-25 22:35:50,374 | INFO     | job 7114618139 has completed (purged errors)
[2026-04-26 00:36:50] 2026-04-25 22:35:50,375 | INFO     | overall cleanup function is called
[2026-04-26 00:36:50] 2026-04-25 22:35:51,383 | INFO     | --- collectZombieJob: --- 10, [5070]
[2026-04-26 00:36:50] 2026-04-25 22:35:51,384 | INFO     | zombie collector waiting for pid 5070
[2026-04-26 00:36:50] 2026-04-25 22:35:51,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 00:36:50] 2026-04-25 22:35:51,384 | INFO     | collected zombie processes
[2026-04-26 00:36:50] 2026-04-25 22:35:51,384 | INFO     | will attempt to kill all subprocesses of pid=5070
[2026-04-26 00:36:50] 2026-04-25 22:35:51,439 | INFO     | process IDs to be killed: [5070] (in reverse order)
[2026-04-26 00:36:50] 2026-04-25 22:35:52,514 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 00:36:50] 2026-04-25 22:35:52,514 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 00:36:50] 2026-04-25 22:35:52,516 | INFO     | did not find any defunct processes belonging to 5070
[2026-04-26 00:36:50] 2026-04-25 22:35:52,521 | INFO     | did not find any defunct processes belonging to 5070
[2026-04-26 00:36:50] 2026-04-25 22:35:52,521 | INFO     | Ready for new job
[2026-04-26 00:36:50] 2026-04-25 22:35:52,523 | INFO     | ***************************************
[2026-04-26 00:36:50] 2026-04-25 22:35:52,526 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 00:36:50] 2026-04-25 22:35:52,527 | INFO     | ***************************************
[2026-04-26 00:36:50] 2026-04-25 22:35:52,527 | INFO     | 
[2026-04-26 00:36:50] 2026-04-25 22:35:52,527 | INFO     | pilot is running in a VM
[2026-04-26 00:36:50] 2026-04-25 22:35:52,527 | INFO     | architecture information:
[2026-04-26 00:36:50] 2026-04-25 22:35:52,553 | INFO     | executing command: cat /etc/os-release
[2026-04-26 00:36:50] 2026-04-25 22:35:52,914 | INFO     | cat /etc/os-release:
[2026-04-26 00:36:50] NAME="CentOS Linux"
[2026-04-26 00:36:50] VERSION="7 (Core)"
[2026-04-26 00:36:50] ID="centos"
[2026-04-26 00:36:50] ID_LIKE="rhel fedora"
[2026-04-26 00:36:50] VERSION_ID="7"
[2026-04-26 00:36:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 00:36:50] ANSI_COLOR="0;31"
[2026-04-26 00:36:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 00:36:50] HOME_URL="https://www.centos.org/"
[2026-04-26 00:36:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 00:36:50] 
[2026-04-26 00:36:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 00:36:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 00:36:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 00:36:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 00:36:50] 
[2026-04-26 00:36:50] 2026-04-25 22:35:52,914 | INFO     | ***************************************
[2026-04-26 00:36:50] 2026-04-25 22:35:53,418 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-04-26 00:36:50] 2026-04-25 22:35:53,754 | INFO     | sufficient remaining disk space (496431529984 B)
[2026-04-26 00:36:50] 2026-04-25 22:35:53,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 00:36:50] 2026-04-25 22:35:53,755 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 00:36:50] 2026-04-25 22:35:53,755 | INFO     | update_server=False
[2026-04-26 00:36:50] 2026-04-25 22:35:53,755 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 00:36:50] 2026-04-25 22:35:53,755 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 00:36:50] 2026-04-25 22:35:53,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 00:36:50] 2026-04-25 22:35:53,756 | INFO     | aborting loop
[2026-04-26 00:36:50] 2026-04-25 22:35:53,945 | INFO     | all payload control threads have been joined
[2026-04-26 00:36:50] 2026-04-25 22:35:54,050 | INFO     | all data control threads have been joined
[2026-04-26 00:36:50] 2026-04-25 22:35:54,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 00:36:50] 2026-04-25 22:35:54,532 | INFO     | all job control threads have been joined
[2026-04-26 00:36:50] 2026-04-25 22:35:54,761 | INFO     | [job] retrieve thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:54,762 | INFO     | [job] job monitor thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:54,833 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 00:36:50] 2026-04-25 22:35:54,876 | INFO     | [payload] validate_post thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:54,952 | INFO     | [payload] control thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,057 | INFO     | [data] control thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,070 | INFO     | [data] copytool_in thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,070 | INFO     | [job] validate thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,169 | INFO     | [payload] failed_post thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,204 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,538 | INFO     | [job] control thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,561 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:55,839 | INFO     | [job] queue monitor thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:56,092 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:56,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:56,275 | INFO     | [data] copytool_out thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:35:57,764 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 00:36:50] 2026-04-25 22:36:22,562 | INFO     | PID=566 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-04-26 00:36:50] 2026-04-25 22:36:22,562 | INFO     | .. there are 2 such processes running
[2026-04-26 00:36:50] 2026-04-25 22:36:22,563 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 00:36:50] 2026-04-25 22:36:22,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 00:36:50] 2026-04-25 22:36:22,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 00:36:50] 2026-04-25 22:36:42,525 | INFO     | [monitor] cgroup control has ended
[2026-04-26 00:36:50] 2026-04-25 22:36:43,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528419804992)>', '<ExcThread(monitor, started 140527764760320)>']
[2026-04-26 00:36:50] 2026-04-25 22:36:43,688 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 00:36:50] 2026-04-25 22:36:43,689 | INFO     | [monitor] control thread has ended
[2026-04-26 00:36:50] 2026-04-25 22:36:48,349 | INFO     | all workflow threads have been joined
[2026-04-26 00:36:50] 2026-04-25 22:36:48,350 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 00:36:50] 2026-04-25 22:36:48,350 | INFO     | traces error code: 0
[2026-04-26 00:36:50] 2026-04-25 22:36:48,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 00:36:50] 2026-04-25 22:36:48,544 [wrapper] ==== pilot stdout END ====
[2026-04-26 00:36:50] 2026-04-25 22:36:48,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 00:36:50] 2026-04-25 22:36:48,551 [wrapper] pilotpid: 566
[2026-04-26 00:36:50] 2026-04-25 22:36:48,554 [wrapper] Pilot exit status: 0
[2026-04-26 00:36:50] 2026-04-25 22:36:48,575 [wrapper] pandaids: 7114618139
[2026-04-26 00:36:50] 2026-04-25 22:36:48,603 [wrapper] cleanup supervisor_pilot 12023 567
[2026-04-26 00:36:50] 2026-04-25 22:36:48,607 [wrapper] Test setup, not cleaning
[2026-04-26 00:36:50] 2026-04-25 22:36:48,610 [wrapper] apfmon messages muted
[2026-04-26 00:36:50] 2026-04-25 22:36:48,612 [wrapper] ==== wrapper stdout END ====
[2026-04-26 00:36:50] 2026-04-25 22:36:48,690 [wrapper] ==== wrapper stderr END ====
[2026-04-26 00:36:50]  *** Error codes and diagnostics ***
[2026-04-26 00:36:50]     "exeErrorCode": 0,
[2026-04-26 00:36:50]     "pilotErrorCode": 0,
[2026-04-26 00:36:50]  *** Listing of results directory ***
[2026-04-26 00:36:50] total 482380
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-26 00:36:50] -rwx------. 1 boinc boinc     36322 Apr 25 14:15 runpilot2-wrapper.sh
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:18 queuedata.json
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc       100 Apr 25 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 00:36:50] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 20:04 run_atlas
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc       105 Apr 25 20:04 job.xml
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc 305329318 Apr 25 20:04 EVNT.48751619._000003.pool.root.1
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc     15667 Apr 25 20:04 start_atlas.sh
[2026-04-26 00:36:50] drwxrwx--x. 2 boinc boinc        68 Apr 25 20:04 shared
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc    697386 Apr 25 20:04 input.tar.gz
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc      6306 Apr 25 20:04 init_data.xml
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc         0 Apr 25 20:04 boinc_lockfile
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc      2522 Apr 25 20:05 pandaJob.out
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc       415 Apr 25 20:11 workernode_map.json
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc    997243 Apr 25 20:11 agis_schedconf.cvmfs.json
[2026-04-26 00:36:50] drwx------. 5 boinc boinc      4096 Apr 25 20:11 pilot3
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc 180774845 Apr 26 00:34 HITS.49860592._000060.pool.root.1
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc       488 Apr 26 00:34 boinc_task_state.xml
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc        95 Apr 26 00:35 pilot_heartbeat.json
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc      1025 Apr 26 00:35 memory_monitor_summary.json
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc   1509089 Apr 26 00:35 agis_ddmendpoints.agis.ALL.json
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc    401684 Apr 26 00:35 log.49860592._000060.job.log.tgz.1
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc      6331 Apr 26 00:35 heartbeat_new.json
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc      6222 Apr 26 00:35 heartbeat.json
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc        28 Apr 26 00:36 wrapper_checkpoint.txt
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc      8192 Apr 26 00:36 boinc_mmap_file
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc      4881 Apr 26 00:36 pilotlog.txt
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc   1465936 Apr 26 00:36 log.49860592._000060.job.log.1
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc       357 Apr 26 00:36 output.list
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc       410 Apr 26 00:36 runtime_log
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc   1884160 Apr 26 00:36 result.tar.gz
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc      8439 Apr 26 00:36 runtime_log.err
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc       656 Apr 26 00:36 b0467b0b42b4.diag
[2026-04-26 00:36:50] -rw-r--r--. 1 boinc boinc     20632 Apr 26 00:36 stderr.txt
[2026-04-26 00:36:50] HITS file was successfully produced:
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc 180774845 Apr 26 00:34 shared/HITS.pool.root.1
[2026-04-26 00:36:50]  *** Contents of shared directory: ***
[2026-04-26 00:36:50] total 477256
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc 305329318 Apr 25 20:04 ATLAS.root_0
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc     15667 Apr 25 20:04 start_atlas.sh
[2026-04-26 00:36:50] -rw-r--r--. 2 boinc boinc    697386 Apr 25 20:04 input.tar.gz
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc 180774845 Apr 26 00:34 HITS.pool.root.1
[2026-04-26 00:36:50] -rw-------. 1 boinc boinc   1884160 Apr 26 00:36 result.tar.gz
00:36:52 (29005): run_atlas exited; CPU time 58437.445143
00:36:52 (29005): called boinc_finish(0)

</stderr_txt>
]]>

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