Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:44:46 (3209260): wrapper (7.7.26015): starting
18:44:46 (3209260): wrapper: running run_atlas (--nthreads 4)
[2026-04-25 18:44:46] Arguments: --nthreads 4
[2026-04-25 18:44:46] Threads: 4
[2026-04-25 18:44:46] Checking for CVMFS
[2026-04-25 18:44:46] No cvmfs_config command found, will try listing directly
[2026-04-25 18:44:46] CVMFS is ok
[2026-04-25 18:44:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 18:44:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 18:44:46] Further information can be found at the LHC@home message board.
[2026-04-25 18:44:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 18:44:46] Checking for apptainer binary...
[2026-04-25 18:44:46] which: no apptainer in ((null))
[2026-04-25 18:44:46] apptainer is not installed, using version from CVMFS
[2026-04-25 18:44:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 18:44:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-04-25 18:44:46] apptainer works
[2026-04-25 18:44:46] Set ATHENA_PROC_NUMBER=4
[2026-04-25 18:44:46] Set ATHENA_CORE_NUMBER=4
[2026-04-25 18:44:46] Starting ATLAS job with PandaID=7114617215
[2026-04-25 18:44:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 21:37:24]  *** The last 200 lines of the pilot log: ***
[2026-04-25 21:37:24] 2026-04-25 19:36:20,009 | INFO     | monitor loop #736: job 0:7114617215 is in state 'finished'
[2026-04-25 21:37:24] 2026-04-25 19:36:20,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,551 | INFO     | job 7114617215 has state=finished
[2026-04-25 21:37:24] 2026-04-25 19:36:20,551 | INFO     | preparing for final server update for job 7114617215 in state='finished'
[2026-04-25 21:37:24] 2026-04-25 19:36:20,552 | INFO     | reading metadata from: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7114617215/jobReport.json
[2026-04-25 21:37:24] 2026-04-25 19:36:20,554 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot112/slots/1/workernode_map.json
[2026-04-25 21:37:24] 2026-04-25 19:36:20,554 | INFO     | this job has now completed (state=finished)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,555 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,555 | INFO     | log transfer has been attempted: DONE
[2026-04-25 21:37:24] 2026-04-25 19:36:20,555 | INFO     | job 7114617215 has finished - writing final server update
[2026-04-25 21:37:24] 2026-04-25 19:36:20,555 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_10029/.job.ad'
[2026-04-25 21:37:24] 2026-04-25 19:36:20,555 | INFO     | total number of processed events: 400 (read)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,578 | INFO     | using path: /var/lib/boinc/var/slot112/slots/1/PanDA_Pilot-7114617215/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,578 | INFO     | extracted standard info from prmon json
[2026-04-25 21:37:24] 2026-04-25 19:36:20,578 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 21:37:24] 2026-04-25 19:36:20,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 21:37:24] 2026-04-25 19:36:20,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 21:37:24] 2026-04-25 19:36:20,582 | INFO     | fitting pss+swap vs Time
[2026-04-25 21:37:24] 2026-04-25 19:36:20,582 | INFO     | sum of square deviations: 1470248962.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,583 | INFO     | sum of deviations: -14726396770.500002
[2026-04-25 21:37:24] 2026-04-25 19:36:20,583 | INFO     | mean x (centered): 0.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,583 | INFO     | mean y: 2403506.970238095
[2026-04-25 21:37:24] 2026-04-25 19:36:20,583 | INFO     | intersect: 2403506.970238095
[2026-04-25 21:37:24] 2026-04-25 19:36:20,584 | INFO     | chi2: 1.4692656611225539
[2026-04-25 21:37:24] 2026-04-25 19:36:20,584 | INFO     | sum of square deviations: 1342841922.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,585 | INFO     | sum of deviations: -14141680080.999996
[2026-04-25 21:37:24] 2026-04-25 19:36:20,585 | INFO     | mean x (centered): 0.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,585 | INFO     | mean y: 2404207.1349693253
[2026-04-25 21:37:24] 2026-04-25 19:36:20,585 | INFO     | intersect: 2404207.1349693253
[2026-04-25 21:37:24] 2026-04-25 19:36:20,585 | INFO     | chi2: 1.4666572139588014
[2026-04-25 21:37:24] 2026-04-25 19:36:20,586 | INFO     | current chi2=1.4666572139588014 (change=0.17753407248077238 %)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,586 | INFO     | right removable region: 162
[2026-04-25 21:37:24] 2026-04-25 19:36:20,586 | INFO     | sum of square deviations: 1342841922.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,587 | INFO     | sum of deviations: -31815377587.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,587 | INFO     | mean x (centered): 0.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,587 | INFO     | mean y: 2423527.263803681
[2026-04-25 21:37:24] 2026-04-25 19:36:20,587 | INFO     | intersect: 2423527.263803681
[2026-04-25 21:37:24] 2026-04-25 19:36:20,587 | INFO     | chi2: 0.2425926473687617
[2026-04-25 21:37:24] 2026-04-25 19:36:20,588 | INFO     | current chi2=0.2425926473687617 (change=83.48885066956406 %)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,588 | INFO     | sum of square deviations: 1223016419.5
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | sum of deviations: -25519737624.499996
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | mean x (centered): 0.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | mean y: 2415505.411392405
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | intersect: 2415505.411392405
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | chi2: 0.2263888036701945
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | current chi2=0.2263888036701945 (change=6.679445512598724 %)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,589 | INFO     | left removable region: 10
[2026-04-25 21:37:24] 2026-04-25 19:36:20,590 | INFO     | sum of square deviations: 1088905998.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,590 | INFO     | sum of deviations: -24508918580.5
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | mean x (centered): 0.0
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | mean y: 2416885.664473684
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | intersect: 2416885.664473684
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | chi2: 0.22162290046901212
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | current memory leak: -22.51 B/s (using 152 data points, chi2=0.22)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,591 | INFO     | could have reported an average CPU frequency of 2770 MHz (9 samples)
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | ..............................
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . Timing measurements:
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . get job = 0 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . initial setup = 6 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . payload setup = 11 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . stage-in = 0 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . payload execution = 10242 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . stage-out = 0 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | . log creation = 0 s
[2026-04-25 21:37:24] 2026-04-25 19:36:20,592 | INFO     | ..............................
[2026-04-25 21:37:24] 2026-04-25 19:36:21,120 | INFO     | 
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | job summary report
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | --------------------------------------------------
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | PanDA job id: 7114617215
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | task id: 49820227
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | errors: (none)
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | pilot state: finished 
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | transexitcode: 0
[2026-04-25 21:37:24] 2026-04-25 19:36:21,121 | INFO     | exeerrorcode: 0
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | exeerrordiag: 
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | exitcode: 0
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | exitmsg: OK
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | cpuconsumptiontime: 39465 s
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | nevents: 400
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | neventsw: 0
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | pid: 3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | pgrp: 3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | corecount: 4
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | event service: False
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | sizes: {0: 2276427, 11: 2276427, 10257: 2304975, 10260: 2313997, 10263: 2314053, 10265: 2314311}
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | --------------------------------------------------
[2026-04-25 21:37:24] 2026-04-25 19:36:21,122 | INFO     | 
[2026-04-25 21:37:24] 2026-04-25 19:36:21,123 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot112/slots/1
[2026-04-25 21:37:24] 2026-04-25 19:36:21,155 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,155 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,155 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,155 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | job 7114617215 has completed (purged errors)
[2026-04-25 21:37:24] 2026-04-25 19:36:21,157 | INFO     | overall cleanup function is called
[2026-04-25 21:37:24] 2026-04-25 19:36:22,166 | INFO     | --- collectZombieJob: --- 10, [3219385]
[2026-04-25 21:37:24] 2026-04-25 19:36:22,167 | INFO     | zombie collector waiting for pid 3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:22,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 21:37:24] 2026-04-25 19:36:22,167 | INFO     | collected zombie processes
[2026-04-25 21:37:24] 2026-04-25 19:36:22,167 | INFO     | will attempt to kill all subprocesses of pid=3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:22,716 | INFO     | process IDs to be killed: [3219385] (in reverse order)
[2026-04-25 21:37:24] 2026-04-25 19:36:22,956 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 21:37:24] 2026-04-25 19:36:22,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 21:37:24] 2026-04-25 19:36:22,983 | INFO     | did not find any defunct processes belonging to 3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:23,006 | INFO     | did not find any defunct processes belonging to 3219385
[2026-04-25 21:37:24] 2026-04-25 19:36:23,007 | INFO     | Ready for new job
[2026-04-25 21:37:24] 2026-04-25 19:36:23,009 | INFO     | ***************************************
[2026-04-25 21:37:24] 2026-04-25 19:36:23,009 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 21:37:24] 2026-04-25 19:36:23,009 | INFO     | ***************************************
[2026-04-25 21:37:24] 2026-04-25 19:36:23,009 | INFO     | 
[2026-04-25 21:37:24] 2026-04-25 19:36:23,017 | INFO     | architecture information:
[2026-04-25 21:37:24] 2026-04-25 19:36:23,017 | INFO     | executing command: cat /etc/os-release
[2026-04-25 21:37:24] 2026-04-25 19:36:23,041 | INFO     | cat /etc/os-release:
[2026-04-25 21:37:24] NAME="CentOS Linux"
[2026-04-25 21:37:24] VERSION="7 (Core)"
[2026-04-25 21:37:24] ID="centos"
[2026-04-25 21:37:24] ID_LIKE="rhel fedora"
[2026-04-25 21:37:24] VERSION_ID="7"
[2026-04-25 21:37:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 21:37:24] ANSI_COLOR="0;31"
[2026-04-25 21:37:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 21:37:24] HOME_URL="https://www.centos.org/"
[2026-04-25 21:37:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 21:37:24] 
[2026-04-25 21:37:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 21:37:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 21:37:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 21:37:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 21:37:24] 
[2026-04-25 21:37:24] 2026-04-25 19:36:23,041 | INFO     | ***************************************
[2026-04-25 21:37:24] 2026-04-25 19:36:23,544 | INFO     | executing command: df -mP /var/lib/boinc/var/slot112/slots/1
[2026-04-25 21:37:24] 2026-04-25 19:36:23,570 | INFO     | sufficient remaining disk space (242276630528 B)
[2026-04-25 21:37:24] 2026-04-25 19:36:23,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 21:37:24] 2026-04-25 19:36:23,571 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 21:37:24] 2026-04-25 19:36:23,571 | INFO     | update_server=False
[2026-04-25 21:37:24] 2026-04-25 19:36:23,571 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 21:37:24] 2026-04-25 19:36:23,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 21:37:24] 2026-04-25 19:36:23,572 | INFO     | aborting loop
[2026-04-25 21:37:24] 2026-04-25 19:36:23,663 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 21:37:24] 2026-04-25 19:36:23,803 | INFO     | all data control threads have been joined
[2026-04-25 21:37:24] 2026-04-25 19:36:24,087 | INFO     | all job control threads have been joined
[2026-04-25 21:37:24] 2026-04-25 19:36:24,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 21:37:24] 2026-04-25 19:36:24,577 | INFO     | [job] retrieve thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:24,578 | INFO     | [job] job monitor thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:24,809 | INFO     | [data] control thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:24,833 | INFO     | all payload control threads have been joined
[2026-04-25 21:37:24] 2026-04-25 19:36:24,856 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,030 | INFO     | [job] validate thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,093 | INFO     | [job] control thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,293 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,383 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,631 | INFO     | [payload] validate_post thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,669 | INFO     | [data] copytool_out thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,687 | INFO     | [data] copytool_in thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:25,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 21:37:24] 2026-04-25 19:36:25,838 | INFO     | [payload] control thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:26,178 | INFO     | [payload] failed_post thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:26,694 | INFO     | [job] queue monitor thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:28,493 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:33,752 | INFO     | job.realtimelogging is not enabled
[2026-04-25 21:37:24] 2026-04-25 19:36:34,757 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 21:37:24] 2026-04-25 19:36:54,662 | INFO     | PID=3213649 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 21:37:24] 2026-04-25 19:36:54,662 | INFO     | .. there are 9 such processes running
[2026-04-25 21:37:24] 2026-04-25 19:36:54,664 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 21:37:24] 2026-04-25 19:36:54,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 21:37:24] 2026-04-25 19:36:54,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 21:37:24] 2026-04-25 19:37:18,615 | INFO     | [monitor] cgroup control has ended
[2026-04-25 21:37:24] 2026-04-25 19:37:19,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22607191263040)>', '<ExcThread(monitor, started 22606881195776)>']
[2026-04-25 21:37:24] 2026-04-25 19:37:19,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 21:37:24] 2026-04-25 19:37:19,738 | INFO     | [monitor] control thread has ended
[2026-04-25 21:37:24] 2026-04-25 19:37:24,037 | INFO     | all workflow threads have been joined
[2026-04-25 21:37:24] 2026-04-25 19:37:24,037 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 21:37:24] 2026-04-25 19:37:24,037 | INFO     | traces error code: 0
[2026-04-25 21:37:24] 2026-04-25 19:37:24,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 21:37:24] 2026-04-25 19:37:24,186 [wrapper] ==== pilot stdout END ====
[2026-04-25 21:37:24] 2026-04-25 19:37:24,189 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 21:37:24] 2026-04-25 19:37:24,192 [wrapper] pilotpid: 3213649
[2026-04-25 21:37:24] 2026-04-25 19:37:24,195 [wrapper] Pilot exit status: 0
[2026-04-25 21:37:24] 2026-04-25 19:37:24,207 [wrapper] pandaids: 7114617215
[2026-04-25 21:37:24] 2026-04-25 19:37:24,335 [wrapper] cleanup supervisor_pilot 3494152 3213650
[2026-04-25 21:37:24] 2026-04-25 19:37:24,338 [wrapper] Test setup, not cleaning
[2026-04-25 21:37:24] 2026-04-25 19:37:24,342 [wrapper] apfmon messages muted
[2026-04-25 21:37:24] 2026-04-25 19:37:24,346 [wrapper] ==== wrapper stdout END ====
[2026-04-25 21:37:24] 2026-04-25 19:37:24,348 [wrapper] ==== wrapper stderr END ====
[2026-04-25 21:37:24]  *** Error codes and diagnostics ***
[2026-04-25 21:37:24]     "exeErrorCode": 0,
[2026-04-25 21:37:24]     "pilotErrorCode": 0,
[2026-04-25 21:37:24]  *** Listing of results directory ***
[2026-04-25 21:37:24] total 2086640
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc     683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-25 21:37:24] -rwx------. 1 boinc boinc      36322 Apr 25 14:12 runpilot2-wrapper.sh
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc       5631 Apr 25 14:18 queuedata.json
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc        100 Apr 25 17:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 21:37:24] -rwxr-xr-x. 1 boinc boinc       7986 Apr 25 17:49 run_atlas
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc        105 Apr 25 17:49 job.xml
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc 1871650233 Apr 25 18:44 EVNT.49820225._000001.pool.root.1
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc       6541 Apr 25 18:44 init_data.xml
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc      15667 Apr 25 18:44 start_atlas.sh
[2026-04-25 21:37:24] drwxrwx--x. 2 boinc boinc       4096 Apr 25 18:44 shared
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc     697400 Apr 25 18:44 input.tar.gz
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc          0 Apr 25 18:44 boinc_lockfile
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc       2543 Apr 25 18:44 pandaJob.out
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc     997235 Apr 25 18:44 agis_schedconf.cvmfs.json
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc    1509089 Apr 25 18:44 agis_ddmendpoints.agis.ALL.json
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc        444 Apr 25 18:45 workernode_map.json
[2026-04-25 21:37:24] drwx------. 5 boinc boinc       4096 Apr 25 18:45 pilot3
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc  258409698 Apr 25 21:35 HITS.49820227._000026.pool.root.1
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc        487 Apr 25 21:35 boinc_task_state.xml
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc       1042 Apr 25 21:36 memory_monitor_summary.json
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc     314001 Apr 25 21:36 log.49820227._000026.job.log.tgz.1
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc       6365 Apr 25 21:36 heartbeat_new.json
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc       6256 Apr 25 21:36 heartbeat.json
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc       8192 Apr 25 21:36 boinc_mmap_file
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc         27 Apr 25 21:36 wrapper_checkpoint.txt
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc         95 Apr 25 21:36 pilot_heartbeat.json
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc       4905 Apr 25 21:37 pilotlog.txt
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc     949281 Apr 25 21:37 log.49820227._000026.job.log.1
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc        357 Apr 25 21:37 output.list
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc        410 Apr 25 21:37 runtime_log
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc    1280000 Apr 25 21:37 result.tar.gz
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc       8845 Apr 25 21:37 runtime_log.err
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc        664 Apr 25 21:37 af90df7ad414.diag
[2026-04-25 21:37:24] -rw-r--r--. 1 boinc boinc      21054 Apr 25 21:37 stderr.txt
[2026-04-25 21:37:24] HITS file was successfully produced:
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc 258409698 Apr 25 21:35 shared/HITS.pool.root.1
[2026-04-25 21:37:24]  *** Contents of shared directory: ***
[2026-04-25 21:37:24] total 2082100
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc 1871650233 Apr 25 18:44 ATLAS.root_0
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc      15667 Apr 25 18:44 start_atlas.sh
[2026-04-25 21:37:24] -rw-r--r--. 2 boinc boinc     697400 Apr 25 18:44 input.tar.gz
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc  258409698 Apr 25 21:35 HITS.pool.root.1
[2026-04-25 21:37:24] -rw-------. 1 boinc boinc    1280000 Apr 25 21:37 result.tar.gz
21:37:26 (3209260): run_atlas exited; CPU time 40003.573281
21:37:26 (3209260): called boinc_finish(0)

</stderr_txt>
]]>

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