Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:25:18 (18384): wrapper (7.7.26015): starting
19:25:18 (18384): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 19:25:18] Arguments: --nthreads 8
[2026-04-25 19:25:18] Threads: 8
[2026-04-25 19:25:18] Checking for CVMFS
[2026-04-25 19:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 19:25:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 19:25:23] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 19:25:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 19:25:24] 2.11.2.0 16919 14436 98724 158857 1 54 20844566 25165825 96 130560 0 5338208 99.913 5791664 15121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-25 19:25:24] CVMFS is ok
[2026-04-25 19:25:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 19:25:24] Checking for apptainer binary...
[2026-04-25 19:25:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 19:25:24] Running /usr/bin/apptainer --version
[2026-04-25 19:25:25] apptainer version 1.3.2-1.el7
[2026-04-25 19:25:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 19:25:49] cg-vwn361.simple-grid.lan
[2026-04-25 19:25:49] apptainer works
[2026-04-25 19:25:49] Set ATHENA_PROC_NUMBER=8
[2026-04-25 19:25:49] Set ATHENA_CORE_NUMBER=8
[2026-04-25 19:25:49] Starting ATLAS job with PandaID=7114617197
[2026-04-25 19:25:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 01:11:03]  *** The last 200 lines of the pilot log: ***
[2026-04-26 01:11:03] 2026-04-25 23:09:47,732 | INFO     | this job has now completed (state=finished)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,732 | INFO     | log transfer has been attempted: DONE
[2026-04-26 01:11:03] 2026-04-25 23:09:47,732 | INFO     | job 7114617197 has finished - writing final server update
[2026-04-26 01:11:03] 2026-04-25 23:09:47,732 | INFO     | total number of processed events: 400 (read)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,735 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7114617197/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,735 | INFO     | extracted standard info from prmon json
[2026-04-26 01:11:03] 2026-04-25 23:09:47,735 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 01:11:03] 2026-04-25 23:09:47,736 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 01:11:03] 2026-04-25 23:09:47,736 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 01:11:03] 2026-04-25 23:09:47,742 | INFO     | fitting pss+swap vs Time
[2026-04-26 01:11:03] 2026-04-25 23:09:47,743 | INFO     | sum of square deviations: 10743038637.5
[2026-04-26 01:11:03] 2026-04-25 23:09:47,746 | INFO     | sum of deviations: 199946194456.5
[2026-04-26 01:11:03] 2026-04-25 23:09:47,747 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,747 | INFO     | mean y: 2480116.9049079753
[2026-04-26 01:11:03] 2026-04-25 23:09:47,747 | INFO     | intersect: 2480116.9049079753
[2026-04-26 01:11:03] 2026-04-25 23:09:47,747 | INFO     | chi2: 8.32631442823125
[2026-04-26 01:11:03] 2026-04-25 23:09:47,748 | INFO     | sum of square deviations: 10256266720.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,751 | INFO     | sum of deviations: 218480820982.99994
[2026-04-26 01:11:03] 2026-04-25 23:09:47,751 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,751 | INFO     | mean y: 2485837.5327102803
[2026-04-26 01:11:03] 2026-04-25 23:09:47,751 | INFO     | intersect: 2485837.5327102803
[2026-04-26 01:11:03] 2026-04-25 23:09:47,752 | INFO     | chi2: 7.607077194591817
[2026-04-26 01:11:03] 2026-04-25 23:09:47,752 | INFO     | current chi2=7.607077194591817 (change=8.63812242305891 %)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,752 | INFO     | right removable region: 320
[2026-04-26 01:11:03] 2026-04-25 23:09:47,753 | INFO     | sum of square deviations: 10256266720.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,756 | INFO     | sum of deviations: 83402791924.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,756 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,756 | INFO     | mean y: 2516612.4112149533
[2026-04-26 01:11:03] 2026-04-25 23:09:47,756 | INFO     | intersect: 2516612.4112149533
[2026-04-26 01:11:03] 2026-04-25 23:09:47,757 | INFO     | chi2: 3.392166601044029
[2026-04-26 01:11:03] 2026-04-25 23:09:47,757 | INFO     | current chi2=3.392166601044029 (change=59.259686500157514 %)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,758 | INFO     | sum of square deviations: 9784425315.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,761 | INFO     | sum of deviations: -1194537776.5
[2026-04-26 01:11:03] 2026-04-25 23:09:47,761 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,761 | INFO     | mean y: 2543916.851265823
[2026-04-26 01:11:03] 2026-04-25 23:09:47,761 | INFO     | intersect: 2543916.851265823
[2026-04-26 01:11:03] 2026-04-25 23:09:47,762 | INFO     | chi2: 0.9168414692856047
[2026-04-26 01:11:03] 2026-04-25 23:09:47,762 | INFO     | current chi2=0.9168414692856047 (change=72.97180306523204 %)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,763 | INFO     | sum of square deviations: 9327281860.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,766 | INFO     | sum of deviations: -13252210899.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,766 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,766 | INFO     | mean y: 2547916.572347267
[2026-04-26 01:11:03] 2026-04-25 23:09:47,766 | INFO     | intersect: 2547916.572347267
[2026-04-26 01:11:03] 2026-04-25 23:09:47,767 | INFO     | chi2: 0.8444658062875827
[2026-04-26 01:11:03] 2026-04-25 23:09:47,767 | INFO     | current chi2=0.8444658062875827 (change=7.8940215318158025 %)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,767 | INFO     | left removable region: 15
[2026-04-26 01:11:03] 2026-04-25 23:09:47,768 | INFO     | sum of square deviations: 8797783560.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,771 | INFO     | sum of deviations: 7559184415.999998
[2026-04-26 01:11:03] 2026-04-25 23:09:47,771 | INFO     | mean x (centered): 0.0
[2026-04-26 01:11:03] 2026-04-25 23:09:47,771 | INFO     | mean y: 2554990.7934426228
[2026-04-26 01:11:03] 2026-04-25 23:09:47,771 | INFO     | intersect: 2554990.7934426228
[2026-04-26 01:11:03] 2026-04-25 23:09:47,772 | INFO     | chi2: 0.05981750361856351
[2026-04-26 01:11:03] 2026-04-25 23:09:47,772 | INFO     | current memory leak: 0.86 B/s (using 305 data points, chi2=0.06)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,772 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | ..............................
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . Timing measurements:
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . get job = 0 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . initial setup = 113 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . payload setup = 238 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . stage-in = 0 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . payload execution = 19988 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . stage-out = 3 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | . log creation = 1 s
[2026-04-26 01:11:03] 2026-04-25 23:09:47,773 | INFO     | ..............................
[2026-04-26 01:11:03] 2026-04-25 23:09:48,103 | INFO     | 
[2026-04-26 01:11:03] 2026-04-25 23:09:48,103 | INFO     | job summary report
[2026-04-26 01:11:03] 2026-04-25 23:09:48,103 | INFO     | --------------------------------------------------
[2026-04-26 01:11:03] 2026-04-25 23:09:48,103 | INFO     | PanDA job id: 7114617197
[2026-04-26 01:11:03] 2026-04-25 23:09:48,103 | INFO     | task id: 49820227
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | errors: (none)
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | pilot state: finished 
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | transexitcode: 0
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | exeerrorcode: 0
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | exeerrordiag: 
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | exitcode: 0
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | exitmsg: OK
[2026-04-26 01:11:03] 2026-04-25 23:09:48,104 | INFO     | cpuconsumptiontime: 82294 s
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | nevents: 400
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | neventsw: 0
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | pid: 26837
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | pgrp: 26837
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | corecount: 8
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | event service: False
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | sizes: {0: 2273950, 1: 2274635, 2: 2246103, 3: 2276464, 13: 2276492, 20230: 2310056, 20235: 2319054, 20238: 2319304}
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | --------------------------------------------------
[2026-04-26 01:11:03] 2026-04-25 23:09:48,105 | INFO     | 
[2026-04-26 01:11:03] 2026-04-25 23:09:48,106 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,469 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | job 7114617197 has completed (purged errors)
[2026-04-26 01:11:03] 2026-04-25 23:09:48,470 | INFO     | overall cleanup function is called
[2026-04-26 01:11:03] 2026-04-25 23:09:49,478 | INFO     | --- collectZombieJob: --- 10, [26837]
[2026-04-26 01:11:03] 2026-04-25 23:09:49,478 | INFO     | zombie collector waiting for pid 26837
[2026-04-26 01:11:03] 2026-04-25 23:09:49,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 01:11:03] 2026-04-25 23:09:49,478 | INFO     | collected zombie processes
[2026-04-26 01:11:03] 2026-04-25 23:09:49,478 | INFO     | will attempt to kill all subprocesses of pid=26837
[2026-04-26 01:11:03] 2026-04-25 23:09:49,527 | INFO     | process IDs to be killed: [26837] (in reverse order)
[2026-04-26 01:11:03] 2026-04-25 23:09:50,463 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 01:11:03] 2026-04-25 23:09:50,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 01:11:03] 2026-04-25 23:09:50,465 | INFO     | did not find any defunct processes belonging to 26837
[2026-04-26 01:11:03] 2026-04-25 23:09:50,466 | INFO     | did not find any defunct processes belonging to 26837
[2026-04-26 01:11:03] 2026-04-25 23:09:50,466 | INFO     | Ready for new job
[2026-04-26 01:11:03] 2026-04-25 23:09:50,468 | INFO     | ***************************************
[2026-04-26 01:11:03] 2026-04-25 23:09:50,468 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 01:11:03] 2026-04-25 23:09:50,468 | INFO     | ***************************************
[2026-04-26 01:11:03] 2026-04-25 23:09:50,468 | INFO     | 
[2026-04-26 01:11:03] 2026-04-25 23:09:50,468 | INFO     | pilot is running in a VM
[2026-04-26 01:11:03] 2026-04-25 23:09:50,469 | INFO     | architecture information:
[2026-04-26 01:11:03] 2026-04-25 23:09:50,476 | INFO     | executing command: cat /etc/os-release
[2026-04-26 01:11:03] 2026-04-25 23:09:50,734 | INFO     | cat /etc/os-release:
[2026-04-26 01:11:03] NAME="CentOS Linux"
[2026-04-26 01:11:03] VERSION="7 (Core)"
[2026-04-26 01:11:03] ID="centos"
[2026-04-26 01:11:03] ID_LIKE="rhel fedora"
[2026-04-26 01:11:03] VERSION_ID="7"
[2026-04-26 01:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 01:11:03] ANSI_COLOR="0;31"
[2026-04-26 01:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 01:11:03] HOME_URL="https://www.centos.org/"
[2026-04-26 01:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 01:11:03] 
[2026-04-26 01:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 01:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 01:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 01:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 01:11:03] 
[2026-04-26 01:11:03] 2026-04-25 23:09:50,735 | INFO     | ***************************************
[2026-04-26 01:11:03] 2026-04-25 23:09:51,238 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-26 01:11:03] 2026-04-25 23:09:51,557 | INFO     | sufficient remaining disk space (493637074944 B)
[2026-04-26 01:11:03] 2026-04-25 23:09:51,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 01:11:03] 2026-04-25 23:09:51,558 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 01:11:03] 2026-04-25 23:09:51,558 | INFO     | update_server=False
[2026-04-26 01:11:03] 2026-04-25 23:09:51,558 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 01:11:03] 2026-04-25 23:09:51,681 | INFO     | all data control threads have been joined
[2026-04-26 01:11:03] 2026-04-25 23:09:51,832 | INFO     | all job control threads have been joined
[2026-04-26 01:11:03] 2026-04-25 23:09:51,868 | INFO     | all payload control threads have been joined
[2026-04-26 01:11:03] 2026-04-25 23:09:51,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 01:11:03] 2026-04-25 23:09:51,934 | INFO     | aborting loop
[2026-04-26 01:11:03] 2026-04-25 23:09:52,564 | INFO     | [job] retrieve thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:52,687 | INFO     | [data] control thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:52,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 01:11:03] 2026-04-25 23:09:52,838 | INFO     | [job] control thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:52,874 | INFO     | [payload] control thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:52,892 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:52,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 01:11:03] 2026-04-25 23:09:52,939 | INFO     | [job] job monitor thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,387 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,473 | INFO     | [job] validate thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,658 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 01:11:03] 2026-04-25 23:09:53,815 | INFO     | [payload] validate_post thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,908 | INFO     | [job] queue monitor thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:53,952 | INFO     | [data] copytool_in thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:54,059 | INFO     | [payload] failed_post thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:54,701 | INFO     | [data] copytool_out thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:09:57,751 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 01:11:03] 2026-04-25 23:10:20,122 | INFO     | PID=22365 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-26 01:11:03] 2026-04-25 23:10:20,122 | INFO     | .. there are 2 such processes running
[2026-04-26 01:11:03] 2026-04-25 23:10:20,125 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 01:11:03] 2026-04-25 23:10:20,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 01:11:03] 2026-04-25 23:10:20,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 01:11:03] 2026-04-25 23:10:50,490 | INFO     | [monitor] cgroup control has ended
[2026-04-26 01:11:03] 2026-04-25 23:10:52,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690633418560)>', '<ExcThread(monitor, started 139689944131328)>']
[2026-04-26 01:11:03] 2026-04-25 23:10:53,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 01:11:03] 2026-04-25 23:10:53,321 | INFO     | [monitor] control thread has ended
[2026-04-26 01:11:03] 2026-04-25 23:10:57,374 | INFO     | all workflow threads have been joined
[2026-04-26 01:11:03] 2026-04-25 23:10:57,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 01:11:03] 2026-04-25 23:10:57,374 | INFO     | traces error code: 0
[2026-04-26 01:11:03] 2026-04-25 23:10:57,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 01:11:03] 2026-04-25 23:10:57,666 [wrapper] ==== pilot stdout END ====
[2026-04-26 01:11:03] 2026-04-25 23:10:57,694 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 01:11:03] 2026-04-25 23:10:57,797 [wrapper] pilotpid: 22365
[2026-04-26 01:11:03] 2026-04-25 23:10:57,889 [wrapper] Pilot exit status: 0
[2026-04-26 01:11:03] 2026-04-25 23:10:58,442 [wrapper] pandaids: 7114617197
[2026-04-26 01:11:03] 2026-04-25 23:10:59,582 [wrapper] cleanup supervisor_pilot 13395 22366
[2026-04-26 01:11:03] 2026-04-25 23:10:59,725 [wrapper] Test setup, not cleaning
[2026-04-26 01:11:03] 2026-04-25 23:10:59,857 [wrapper] apfmon messages muted
[2026-04-26 01:11:03] 2026-04-25 23:10:59,990 [wrapper] ==== wrapper stdout END ====
[2026-04-26 01:11:03] 2026-04-25 23:11:00,123 [wrapper] ==== wrapper stderr END ====
[2026-04-26 01:11:03]  *** Error codes and diagnostics ***
[2026-04-26 01:11:03]     "exeErrorCode": 0,
[2026-04-26 01:11:03]     "pilotErrorCode": 0,
[2026-04-26 01:11:03]  *** Listing of results directory ***
[2026-04-26 01:11:03] total 2081624
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc     683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-26 01:11:03] -rwx------. 1 boinc boinc      36322 Apr 25 14:14 runpilot2-wrapper.sh
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc       5631 Apr 25 14:18 queuedata.json
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc        100 Apr 25 19:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 01:11:03] -rwxr-xr-x. 1 boinc boinc       7986 Apr 25 19:25 run_atlas
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc        105 Apr 25 19:25 job.xml
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc       6305 Apr 25 19:25 init_data.xml
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc 1871650233 Apr 25 19:25 EVNT.49820225._000001.pool.root.1
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc      15667 Apr 25 19:25 start_atlas.sh
[2026-04-26 01:11:03] drwxrwx--x. 2 boinc boinc         68 Apr 25 19:25 shared
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc     697398 Apr 25 19:25 input.tar.gz
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc          0 Apr 25 19:25 boinc_lockfile
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc       2540 Apr 25 19:25 pandaJob.out
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc        415 Apr 25 19:32 workernode_map.json
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc     997243 Apr 25 19:32 agis_schedconf.cvmfs.json
[2026-04-26 01:11:03] drwx------. 5 boinc boinc       4096 Apr 25 19:32 pilot3
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc  251159173 Apr 26 01:08 HITS.49820227._000008.pool.root.1
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc        490 Apr 26 01:08 boinc_task_state.xml
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc       1021 Apr 26 01:09 memory_monitor_summary.json
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc    1509089 Apr 26 01:09 agis_ddmendpoints.agis.ALL.json
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc     441797 Apr 26 01:09 log.49820227._000008.job.log.tgz.1
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc       6335 Apr 26 01:09 heartbeat_new.json
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc       6226 Apr 26 01:09 heartbeat.json
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc         95 Apr 26 01:10 pilot_heartbeat.json
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc       8192 Apr 26 01:10 boinc_mmap_file
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc         28 Apr 26 01:10 wrapper_checkpoint.txt
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc       4883 Apr 26 01:10 pilotlog.txt
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc    1886619 Apr 26 01:11 log.49820227._000008.job.log.1
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc        357 Apr 26 01:11 output.list
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc        410 Apr 26 01:11 runtime_log
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc    2344960 Apr 26 01:11 result.tar.gz
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc       8439 Apr 26 01:11 runtime_log.err
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc        655 Apr 26 01:11 b009a7f8f23b.diag
[2026-04-26 01:11:03] -rw-r--r--. 1 boinc boinc      20628 Apr 26 01:11 stderr.txt
[2026-04-26 01:11:03] HITS file was successfully produced:
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc 251159173 Apr 26 01:08 shared/HITS.pool.root.1
[2026-04-26 01:11:03]  *** Contents of shared directory: ***
[2026-04-26 01:11:03] total 2076052
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc 1871650233 Apr 25 19:25 ATLAS.root_0
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc      15667 Apr 25 19:25 start_atlas.sh
[2026-04-26 01:11:03] -rw-r--r--. 2 boinc boinc     697398 Apr 25 19:25 input.tar.gz
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc  251159173 Apr 26 01:08 HITS.pool.root.1
[2026-04-26 01:11:03] -rw-------. 1 boinc boinc    2344960 Apr 26 01:11 result.tar.gz
01:11:05 (18384): run_atlas exited; CPU time 82487.328591
01:11:05 (18384): called boinc_finish(0)

</stderr_txt>
]]>

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