Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:11:09 (13597): wrapper (7.7.26015): starting
01:11:09 (13597): wrapper: running run_atlas (--nthreads 8)
[2026-04-26 01:11:09] Arguments: --nthreads 8
[2026-04-26 01:11:09] Threads: 8
[2026-04-26 01:11:09] Checking for CVMFS
[2026-04-26 01:11:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-26 01:11:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-26 01:11:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-26 01:11:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-26 01:11:15] 2.11.2.0 16919 14782 99340 158865 0 54 20905935 25165825 96 130560 0 5410987 99.914 5802611 15015 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-26 01:11:15] CVMFS is ok
[2026-04-26 01:11:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-26 01:11:15] Checking for apptainer binary...
[2026-04-26 01:11:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-26 01:11:15] Running /usr/bin/apptainer --version
[2026-04-26 01:11:15] apptainer version 1.3.2-1.el7
[2026-04-26 01:11:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-26 01:11:27] cg-vwn361.simple-grid.lan
[2026-04-26 01:11:27] apptainer works
[2026-04-26 01:11:27] Set ATHENA_PROC_NUMBER=8
[2026-04-26 01:11:27] Set ATHENA_CORE_NUMBER=8
[2026-04-26 01:11:27] Starting ATLAS job with PandaID=7114612000
[2026-04-26 01:11:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 05:21:11]  *** The last 200 lines of the pilot log: ***
[2026-04-26 05:21:11] 2026-04-26 03:20:08,143 | INFO     | this job has now completed (state=finished)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,143 | INFO     | log transfer has been attempted: DONE
[2026-04-26 05:21:11] 2026-04-26 03:20:08,143 | INFO     | job 7114612000 has finished - writing final server update
[2026-04-26 05:21:11] 2026-04-26 03:20:08,144 | INFO     | total number of processed events: 400 (read)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,146 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7114612000/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,147 | INFO     | extracted standard info from prmon json
[2026-04-26 05:21:11] 2026-04-26 03:20:08,147 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 05:21:11] 2026-04-26 03:20:08,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 05:21:11] 2026-04-26 03:20:08,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 05:21:11] 2026-04-26 03:20:08,152 | INFO     | fitting pss+swap vs Time
[2026-04-26 05:21:11] 2026-04-26 03:20:08,153 | INFO     | sum of square deviations: 3972995422.5
[2026-04-26 05:21:11] 2026-04-26 03:20:08,155 | INFO     | sum of deviations: 77936398923.99997
[2026-04-26 05:21:11] 2026-04-26 03:20:08,155 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,155 | INFO     | mean y: 2458089.9914529915
[2026-04-26 05:21:11] 2026-04-26 03:20:08,155 | INFO     | intersect: 2458089.9914529915
[2026-04-26 05:21:11] 2026-04-26 03:20:08,156 | INFO     | chi2: 10.168424484386138
[2026-04-26 05:21:11] 2026-04-26 03:20:08,156 | INFO     | sum of square deviations: 3723716330.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,158 | INFO     | sum of deviations: 107928336939.00003
[2026-04-26 05:21:11] 2026-04-26 03:20:08,158 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,159 | INFO     | mean y: 2476186.061135371
[2026-04-26 05:21:11] 2026-04-26 03:20:08,159 | INFO     | intersect: 2476186.061135371
[2026-04-26 05:21:11] 2026-04-26 03:20:08,159 | INFO     | chi2: 8.728682716652395
[2026-04-26 05:21:11] 2026-04-26 03:20:08,159 | INFO     | current chi2=8.728682716652395 (change=14.15894635343461 %)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,160 | INFO     | right removable region: 228
[2026-04-26 05:21:11] 2026-04-26 03:20:08,160 | INFO     | sum of square deviations: 3723716330.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,162 | INFO     | sum of deviations: -6131598244.000025
[2026-04-26 05:21:11] 2026-04-26 03:20:08,162 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,163 | INFO     | mean y: 2509496.707423581
[2026-04-26 05:21:11] 2026-04-26 03:20:08,163 | INFO     | intersect: 2509496.707423581
[2026-04-26 05:21:11] 2026-04-26 03:20:08,163 | INFO     | chi2: 4.8223375908910056
[2026-04-26 05:21:11] 2026-04-26 03:20:08,163 | INFO     | current chi2=4.8223375908910056 (change=52.57537096040963 %)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,164 | INFO     | sum of square deviations: 3485088600.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,166 | INFO     | sum of deviations: -69781726377.5
[2026-04-26 05:21:11] 2026-04-26 03:20:08,166 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,166 | INFO     | mean y: 2550126.870535714
[2026-04-26 05:21:11] 2026-04-26 03:20:08,166 | INFO     | intersect: 2550126.870535714
[2026-04-26 05:21:11] 2026-04-26 03:20:08,166 | INFO     | chi2: 1.9792562134504865
[2026-04-26 05:21:11] 2026-04-26 03:20:08,167 | INFO     | current chi2=1.9792562134504865 (change=58.956498251197985 %)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,167 | INFO     | sum of square deviations: 3256879670.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,169 | INFO     | sum of deviations: -78653294043.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,169 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,169 | INFO     | mean y: 2555990.9406392695
[2026-04-26 05:21:11] 2026-04-26 03:20:08,169 | INFO     | intersect: 2555990.9406392695
[2026-04-26 05:21:11] 2026-04-26 03:20:08,170 | INFO     | chi2: 1.8492029778879955
[2026-04-26 05:21:11] 2026-04-26 03:20:08,170 | INFO     | current chi2=1.8492029778879955 (change=6.570813555045812 %)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,170 | INFO     | left removable region: 15
[2026-04-26 05:21:11] 2026-04-26 03:20:08,170 | INFO     | sum of square deviations: 2996454322.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,172 | INFO     | sum of deviations: -47072930179.99999
[2026-04-26 05:21:11] 2026-04-26 03:20:08,172 | INFO     | mean x (centered): 0.0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,173 | INFO     | mean y: 2577797.234741784
[2026-04-26 05:21:11] 2026-04-26 03:20:08,173 | INFO     | intersect: 2577797.234741784
[2026-04-26 05:21:11] 2026-04-26 03:20:08,173 | INFO     | chi2: 0.19037702660683073
[2026-04-26 05:21:11] 2026-04-26 03:20:08,173 | INFO     | current memory leak: -15.71 B/s (using 213 data points, chi2=0.19)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,174 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,174 | INFO     | ..............................
[2026-04-26 05:21:11] 2026-04-26 03:20:08,174 | INFO     | . Timing measurements:
[2026-04-26 05:21:11] 2026-04-26 03:20:08,174 | INFO     | . get job = 0 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . initial setup = 126 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . payload setup = 183 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . stage-in = 0 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . payload execution = 14339 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . stage-out = 3 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,175 | INFO     | . log creation = 1 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,176 | INFO     | ..............................
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | 
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | job summary report
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | --------------------------------------------------
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | PanDA job id: 7114612000
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | task id: 49860756
[2026-04-26 05:21:11] 2026-04-26 03:20:08,302 | INFO     | errors: (none)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | pilot state: finished 
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | transexitcode: 0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | exeerrorcode: 0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | exeerrordiag: 
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | exitcode: 0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | exitmsg: OK
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | cpuconsumptiontime: 53905 s
[2026-04-26 05:21:11] 2026-04-26 03:20:08,303 | INFO     | nevents: 400
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | neventsw: 0
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | pid: 22056
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | pgrp: 22056
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | corecount: 8
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | event service: False
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | sizes: {0: 2274624, 1: 2274879, 2: 2276453, 12: 2276481, 14528: 2307398, 14533: 2316396, 14536: 2316580, 14539: 2316774}
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | --------------------------------------------------
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | 
[2026-04-26 05:21:11] 2026-04-26 03:20:08,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-04-26 05:21:11] 2026-04-26 03:20:08,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | job 7114612000 has completed (purged errors)
[2026-04-26 05:21:11] 2026-04-26 03:20:08,824 | INFO     | overall cleanup function is called
[2026-04-26 05:21:11] 2026-04-26 03:20:09,833 | INFO     | --- collectZombieJob: --- 10, [22056]
[2026-04-26 05:21:11] 2026-04-26 03:20:09,833 | INFO     | zombie collector waiting for pid 22056
[2026-04-26 05:21:11] 2026-04-26 03:20:09,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 05:21:11] 2026-04-26 03:20:09,833 | INFO     | collected zombie processes
[2026-04-26 05:21:11] 2026-04-26 03:20:09,833 | INFO     | will attempt to kill all subprocesses of pid=22056
[2026-04-26 05:21:11] 2026-04-26 03:20:09,908 | INFO     | process IDs to be killed: [22056] (in reverse order)
[2026-04-26 05:21:11] 2026-04-26 03:20:10,740 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 05:21:11] 2026-04-26 03:20:10,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 05:21:11] 2026-04-26 03:20:10,742 | INFO     | did not find any defunct processes belonging to 22056
[2026-04-26 05:21:11] 2026-04-26 03:20:10,744 | INFO     | did not find any defunct processes belonging to 22056
[2026-04-26 05:21:11] 2026-04-26 03:20:10,744 | INFO     | Ready for new job
[2026-04-26 05:21:11] 2026-04-26 03:20:10,746 | INFO     | ***************************************
[2026-04-26 05:21:11] 2026-04-26 03:20:10,746 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 05:21:11] 2026-04-26 03:20:10,746 | INFO     | ***************************************
[2026-04-26 05:21:11] 2026-04-26 03:20:10,746 | INFO     | 
[2026-04-26 05:21:11] 2026-04-26 03:20:10,747 | INFO     | pilot is running in a VM
[2026-04-26 05:21:11] 2026-04-26 03:20:10,747 | INFO     | architecture information:
[2026-04-26 05:21:11] 2026-04-26 03:20:10,758 | INFO     | executing command: cat /etc/os-release
[2026-04-26 05:21:11] 2026-04-26 03:20:11,049 | INFO     | cat /etc/os-release:
[2026-04-26 05:21:11] NAME="CentOS Linux"
[2026-04-26 05:21:11] VERSION="7 (Core)"
[2026-04-26 05:21:11] ID="centos"
[2026-04-26 05:21:11] ID_LIKE="rhel fedora"
[2026-04-26 05:21:11] VERSION_ID="7"
[2026-04-26 05:21:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 05:21:11] ANSI_COLOR="0;31"
[2026-04-26 05:21:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 05:21:11] HOME_URL="https://www.centos.org/"
[2026-04-26 05:21:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 05:21:11] 
[2026-04-26 05:21:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 05:21:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 05:21:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 05:21:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 05:21:11] 
[2026-04-26 05:21:11] 2026-04-26 03:20:11,050 | INFO     | ***************************************
[2026-04-26 05:21:11] 2026-04-26 03:20:11,553 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-04-26 05:21:11] 2026-04-26 03:20:11,872 | INFO     | sufficient remaining disk space (496686333952 B)
[2026-04-26 05:21:11] 2026-04-26 03:20:11,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 05:21:11] 2026-04-26 03:20:11,872 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 05:21:11] 2026-04-26 03:20:11,872 | INFO     | update_server=False
[2026-04-26 05:21:11] 2026-04-26 03:20:11,872 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 05:21:11] 2026-04-26 03:20:11,876 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 05:21:11] 2026-04-26 03:20:12,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 05:21:11] 2026-04-26 03:20:12,201 | INFO     | aborting loop
[2026-04-26 05:21:11] 2026-04-26 03:20:12,342 | INFO     | all job control threads have been joined
[2026-04-26 05:21:11] 2026-04-26 03:20:12,352 | INFO     | all payload control threads have been joined
[2026-04-26 05:21:11] 2026-04-26 03:20:12,832 | INFO     | all data control threads have been joined
[2026-04-26 05:21:11] 2026-04-26 03:20:12,878 | INFO     | [job] retrieve thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:12,881 | INFO     | [payload] validate_post thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 05:21:11] 2026-04-26 03:20:13,207 | INFO     | [job] job monitor thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,307 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 05:21:11] 2026-04-26 03:20:13,348 | INFO     | [job] control thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,358 | INFO     | [payload] control thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,723 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,838 | INFO     | [data] control thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:13,893 | INFO     | [data] copytool_in thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:14,046 | INFO     | [payload] failed_post thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:14,049 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:14,068 | INFO     | [job] validate thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:14,261 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:14,321 | INFO     | [job] queue monitor thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:15,031 | INFO     | [data] copytool_out thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:15,885 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 05:21:11] 2026-04-26 03:20:40,095 | INFO     | PID=17608 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-26 05:21:11] 2026-04-26 03:20:40,095 | INFO     | .. there are 2 such processes running
[2026-04-26 05:21:11] 2026-04-26 03:20:40,096 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 05:21:11] 2026-04-26 03:20:40,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 05:21:11] 2026-04-26 03:20:40,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 05:21:11] 2026-04-26 03:21:00,903 | INFO     | [monitor] cgroup control has ended
[2026-04-26 05:21:11] 2026-04-26 03:21:00,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686615238464)>', '<ExcThread(monitor, started 139685884061440)>']
[2026-04-26 05:21:11] 2026-04-26 03:21:01,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 05:21:11] 2026-04-26 03:21:01,223 | INFO     | [monitor] control thread has ended
[2026-04-26 05:21:11] 2026-04-26 03:21:06,011 | INFO     | all workflow threads have been joined
[2026-04-26 05:21:11] 2026-04-26 03:21:06,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 05:21:11] 2026-04-26 03:21:06,011 | INFO     | traces error code: 0
[2026-04-26 05:21:11] 2026-04-26 03:21:06,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 05:21:11] 2026-04-26 03:21:06,398 [wrapper] ==== pilot stdout END ====
[2026-04-26 05:21:11] 2026-04-26 03:21:06,486 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 05:21:11] 2026-04-26 03:21:06,636 [wrapper] pilotpid: 17608
[2026-04-26 05:21:11] 2026-04-26 03:21:06,725 [wrapper] Pilot exit status: 0
[2026-04-26 05:21:11] 2026-04-26 03:21:07,169 [wrapper] pandaids: 7114612000
[2026-04-26 05:21:11] 2026-04-26 03:21:08,203 [wrapper] cleanup supervisor_pilot 28789 17609
[2026-04-26 05:21:11] 2026-04-26 03:21:08,321 [wrapper] Test setup, not cleaning
[2026-04-26 05:21:11] 2026-04-26 03:21:08,447 [wrapper] apfmon messages muted
[2026-04-26 05:21:11] 2026-04-26 03:21:08,564 [wrapper] ==== wrapper stdout END ====
[2026-04-26 05:21:11] 2026-04-26 03:21:08,603 [wrapper] ==== wrapper stderr END ====
[2026-04-26 05:21:11]  *** Error codes and diagnostics ***
[2026-04-26 05:21:11]     "exeErrorCode": 0,
[2026-04-26 05:21:11]     "pilotErrorCode": 0,
[2026-04-26 05:21:11]  *** Listing of results directory ***
[2026-04-26 05:21:11] total 482116
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-26 05:21:11] -rwx------. 1 boinc boinc     36322 Apr 25 14:12 runpilot2-wrapper.sh
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:18 queuedata.json
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc       100 Apr 26 01:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 05:21:11] -rwxr-xr-x. 1 boinc boinc      7986 Apr 26 01:11 run_atlas
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc       105 Apr 26 01:11 job.xml
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc      6305 Apr 26 01:11 init_data.xml
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc 286230023 Apr 26 01:11 EVNT.48753299._000004.pool.root.1
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc     15667 Apr 26 01:11 start_atlas.sh
[2026-04-26 05:21:11] drwxrwx--x. 2 boinc boinc        68 Apr 26 01:11 shared
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc    697399 Apr 26 01:11 input.tar.gz
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc         0 Apr 26 01:11 boinc_lockfile
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc      2558 Apr 26 01:11 pandaJob.out
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc       415 Apr 26 01:17 workernode_map.json
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc    997525 Apr 26 01:17 agis_schedconf.cvmfs.json
[2026-04-26 05:21:11] drwx------. 5 boinc boinc      4096 Apr 26 01:17 pilot3
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc 199831470 Apr 26 05:18 HITS.49860756._000090.pool.root.1
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc       488 Apr 26 05:18 boinc_task_state.xml
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc      1012 Apr 26 05:19 memory_monitor_summary.json
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc   1509089 Apr 26 05:19 agis_ddmendpoints.agis.ALL.json
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc    398167 Apr 26 05:20 log.49860756._000090.job.log.tgz.1
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc      6333 Apr 26 05:20 heartbeat_new.json
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc      6224 Apr 26 05:20 heartbeat.json
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc        95 Apr 26 05:20 pilot_heartbeat.json
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc      8192 Apr 26 05:20 boinc_mmap_file
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc        28 Apr 26 05:20 wrapper_checkpoint.txt
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc      4883 Apr 26 05:21 pilotlog.txt
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc   1354243 Apr 26 05:21 log.49860756._000090.job.log.1
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc       357 Apr 26 05:21 output.list
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc       410 Apr 26 05:21 runtime_log
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc   1771520 Apr 26 05:21 result.tar.gz
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc      8439 Apr 26 05:21 runtime_log.err
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc       656 Apr 26 05:21 af90dc22690a.diag
[2026-04-26 05:21:11] -rw-r--r--. 1 boinc boinc     20581 Apr 26 05:21 stderr.txt
[2026-04-26 05:21:11] HITS file was successfully produced:
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc 199831470 Apr 26 05:18 shared/HITS.pool.root.1
[2026-04-26 05:21:11]  *** Contents of shared directory: ***
[2026-04-26 05:21:11] total 477104
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc 286230023 Apr 26 01:11 ATLAS.root_0
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc     15667 Apr 26 01:11 start_atlas.sh
[2026-04-26 05:21:11] -rw-r--r--. 2 boinc boinc    697399 Apr 26 01:11 input.tar.gz
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc 199831470 Apr 26 05:18 HITS.pool.root.1
[2026-04-26 05:21:11] -rw-------. 1 boinc boinc   1771520 Apr 26 05:21 result.tar.gz
05:21:13 (13597): run_atlas exited; CPU time 54036.370818
05:21:13 (13597): called boinc_finish(0)

</stderr_txt>
]]>

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