Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:30:44 (2232903): wrapper (7.7.26015): starting
10:30:44 (2232903): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 10:30:44] Arguments: --nthreads 8
[2026-04-25 10:30:44] Threads: 8
[2026-04-25 10:30:44] Checking for CVMFS
[2026-04-25 10:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 10:30:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 10:30:45] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 10:30:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 10:30:46] 2.13.3.0 9890 246038 200916 158852 0 322 26633516 32935936 23032 16776704 0 1142090611 99.719 832875066 32682 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 10:30:46] CVMFS is ok
[2026-04-25 10:30:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 10:30:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 10:30:46] Further information can be found at the LHC@home message board.
[2026-04-25 10:30:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 10:30:46] Checking for apptainer binary...
[2026-04-25 10:30:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 10:30:46] Running /usr/bin/apptainer --version
[2026-04-25 10:30:46] apptainer version 1.4.5-2.el9
[2026-04-25 10:30:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 10:30:46] c-8-36.aglt2.org
[2026-04-25 10:30:46] apptainer works
[2026-04-25 10:30:46] Set ATHENA_PROC_NUMBER=8
[2026-04-25 10:30:46] Set ATHENA_CORE_NUMBER=8
[2026-04-25 10:30:46] Starting ATLAS job with PandaID=7114618484
[2026-04-25 10:30:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 19:32:02]  *** The last 200 lines of the pilot log: ***
[2026-04-25 19:32:02] 2026-04-25 23:31:20,132 | INFO     | log transfer has been attempted: DONE
[2026-04-25 19:32:02] 2026-04-25 23:31:20,132 | INFO     | job 7114618484 has finished - writing final server update
[2026-04-25 19:32:02] 2026-04-25 23:31:20,140 | INFO     | total number of processed events: 400 (read)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,227 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7114618484/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,228 | INFO     | extracted standard info from prmon json
[2026-04-25 19:32:02] 2026-04-25 23:31:20,228 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 19:32:02] 2026-04-25 23:31:20,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 19:32:02] 2026-04-25 23:31:20,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 19:32:02] 2026-04-25 23:31:20,270 | INFO     | fitting pss+swap vs Time
[2026-04-25 19:32:02] 2026-04-25 23:31:20,271 | INFO     | sum of square deviations: 46163459524.36968
[2026-04-25 19:32:02] 2026-04-25 23:31:20,337 | INFO     | sum of deviations: -131024621568.61139
[2026-04-25 19:32:02] 2026-04-25 23:31:20,342 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,342 | INFO     | mean y: 2549850.852830189
[2026-04-25 19:32:02] 2026-04-25 23:31:20,342 | INFO     | intersect: 2549850.852830189
[2026-04-25 19:32:02] 2026-04-25 23:31:20,343 | INFO     | chi2: 5.060174277708568
[2026-04-25 19:32:02] 2026-04-25 23:31:20,344 | INFO     | sum of square deviations: 44869358945.91247
[2026-04-25 19:32:02] 2026-04-25 23:31:20,380 | INFO     | sum of deviations: -27987002394.77905
[2026-04-25 19:32:02] 2026-04-25 23:31:20,417 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,417 | INFO     | mean y: 2561946.7504761904
[2026-04-25 19:32:02] 2026-04-25 23:31:20,417 | INFO     | intersect: 2561946.7504761904
[2026-04-25 19:32:02] 2026-04-25 23:31:20,418 | INFO     | chi2: 2.993355322035121
[2026-04-25 19:32:02] 2026-04-25 23:31:20,419 | INFO     | current chi2=2.993355322035121 (change=40.84481763362068 %)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,419 | INFO     | sum of square deviations: 43599645528.123116
[2026-04-25 19:32:02] 2026-04-25 23:31:20,504 | INFO     | sum of deviations: -27805140783.761555
[2026-04-25 19:32:02] 2026-04-25 23:31:20,504 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,504 | INFO     | mean y: 2561968.8634615387
[2026-04-25 19:32:02] 2026-04-25 23:31:20,504 | INFO     | intersect: 2561968.8634615387
[2026-04-25 19:32:02] 2026-04-25 23:31:20,510 | INFO     | chi2: 2.9929510651669973
[2026-04-25 19:32:02] 2026-04-25 23:31:20,511 | INFO     | current chi2=2.9929510651669973 (change=0.013505141375895372 %)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,511 | INFO     | right removable region: 519
[2026-04-25 19:32:02] 2026-04-25 23:31:20,512 | INFO     | sum of square deviations: 44869032960.677986
[2026-04-25 19:32:02] 2026-04-25 23:31:20,598 | INFO     | sum of deviations: -255966339445.24597
[2026-04-25 19:32:02] 2026-04-25 23:31:20,621 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,646 | INFO     | mean y: 2564533.794285714
[2026-04-25 19:32:02] 2026-04-25 23:31:20,646 | INFO     | intersect: 2564533.794285714
[2026-04-25 19:32:02] 2026-04-25 23:31:20,647 | INFO     | chi2: 2.7233074254743004
[2026-04-25 19:32:02] 2026-04-25 23:31:20,647 | INFO     | current chi2=2.7233074254743004 (change=46.18154877646796 %)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,648 | INFO     | sum of square deviations: 43599025459.36735
[2026-04-25 19:32:02] 2026-04-25 23:31:20,655 | INFO     | sum of deviations: -257584546530.3058
[2026-04-25 19:32:02] 2026-04-25 23:31:20,656 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,656 | INFO     | mean y: 2564719.3403846156
[2026-04-25 19:32:02] 2026-04-25 23:31:20,656 | INFO     | intersect: 2564719.3403846156
[2026-04-25 19:32:02] 2026-04-25 23:31:20,657 | INFO     | chi2: 2.6941587745166338
[2026-04-25 19:32:02] 2026-04-25 23:31:20,657 | INFO     | current chi2=2.6941587745166338 (change=1.0703400829816334 %)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,657 | INFO     | left removable region: 10
[2026-04-25 19:32:02] 2026-04-25 23:31:20,658 | INFO     | sum of square deviations: 40890480209.241554
[2026-04-25 19:32:02] 2026-04-25 23:31:20,664 | INFO     | sum of deviations: -153474972794.38705
[2026-04-25 19:32:02] 2026-04-25 23:31:20,664 | INFO     | mean x (centered): 0.0
[2026-04-25 19:32:02] 2026-04-25 23:31:20,664 | INFO     | mean y: 2577423.8565815324
[2026-04-25 19:32:02] 2026-04-25 23:31:20,664 | INFO     | intersect: 2577423.8565815324
[2026-04-25 19:32:02] 2026-04-25 23:31:20,665 | INFO     | chi2: 0.5867879141339382
[2026-04-25 19:32:02] 2026-04-25 23:31:20,665 | INFO     | current memory leak: -3.75 B/s (using 509 data points, chi2=0.59)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,671 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2026-04-25 19:32:02] 2026-04-25 23:31:20,671 | INFO     | ..............................
[2026-04-25 19:32:02] 2026-04-25 23:31:20,671 | INFO     | . Timing measurements:
[2026-04-25 19:32:02] 2026-04-25 23:31:20,671 | INFO     | . get job = 0 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . initial setup = 21 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . payload setup = 44 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . stage-in = 0 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . payload execution = 32308 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . stage-out = 10 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | . log creation = 2 s
[2026-04-25 19:32:02] 2026-04-25 23:31:20,672 | INFO     | ..............................
[2026-04-25 19:32:02] 2026-04-25 23:31:21,576 | INFO     | 
[2026-04-25 19:32:02] 2026-04-25 23:31:21,576 | INFO     | job summary report
[2026-04-25 19:32:02] 2026-04-25 23:31:21,576 | INFO     | --------------------------------------------------
[2026-04-25 19:32:02] 2026-04-25 23:31:21,576 | INFO     | PanDA job id: 7114618484
[2026-04-25 19:32:02] 2026-04-25 23:31:21,576 | INFO     | task id: 49860624
[2026-04-25 19:32:02] 2026-04-25 23:31:21,577 | INFO     | errors: (none)
[2026-04-25 19:32:02] 2026-04-25 23:31:21,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 19:32:02] 2026-04-25 23:31:21,614 | INFO     | pilot state: finished 
[2026-04-25 19:32:02] 2026-04-25 23:31:21,614 | INFO     | transexitcode: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:21,614 | INFO     | exeerrorcode: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:21,639 | INFO     | exeerrordiag: 
[2026-04-25 19:32:02] 2026-04-25 23:31:21,639 | INFO     | exitcode: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:21,639 | INFO     | exitmsg: OK
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | cpuconsumptiontime: 45319 s
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | nevents: 400
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | neventsw: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | pid: 2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | pgrp: 2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | corecount: 8
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | event service: False
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | sizes: {0: 2273895, 1: 2274580, 2: 2274580, 3: 2276437, 32358: 2314724, 32359: 2314723, 32371: 2323933, 32374: 2323989, 32375: 2324183}
[2026-04-25 19:32:02] 2026-04-25 23:31:21,640 | INFO     | --------------------------------------------------
[2026-04-25 19:32:02] 2026-04-25 23:31:21,641 | INFO     | 
[2026-04-25 19:32:02] 2026-04-25 23:31:21,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 19:32:02] 2026-04-25 23:31:22,023 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,025 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 19:32:02] 2026-04-25 23:31:22,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,026 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 19:32:02] 2026-04-25 23:31:22,026 | INFO     | job 7114618484 has completed (purged errors)
[2026-04-25 19:32:02] 2026-04-25 23:31:22,026 | INFO     | overall cleanup function is called
[2026-04-25 19:32:02] 2026-04-25 23:31:22,344 | INFO     | PID=2239559 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-25 19:32:02] 2026-04-25 23:31:22,345 | INFO     | .. there are 42 such processes running
[2026-04-25 19:32:02] 2026-04-25 23:31:23,074 | INFO     | --- collectZombieJob: --- 10, [2251566]
[2026-04-25 19:32:02] 2026-04-25 23:31:23,074 | INFO     | zombie collector waiting for pid 2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:23,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 19:32:02] 2026-04-25 23:31:23,074 | INFO     | collected zombie processes
[2026-04-25 19:32:02] 2026-04-25 23:31:23,075 | INFO     | will attempt to kill all subprocesses of pid=2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:24,627 | INFO     | process IDs to be killed: [2251566] (in reverse order)
[2026-04-25 19:32:02] 2026-04-25 23:31:24,801 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 19:32:02] 2026-04-25 23:31:24,801 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 19:32:02] 2026-04-25 23:31:24,819 | INFO     | did not find any defunct processes belonging to 2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:24,837 | INFO     | did not find any defunct processes belonging to 2251566
[2026-04-25 19:32:02] 2026-04-25 23:31:24,837 | INFO     | Ready for new job
[2026-04-25 19:32:02] 2026-04-25 23:31:24,840 | INFO     | ***************************************
[2026-04-25 19:32:02] 2026-04-25 23:31:24,840 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 19:32:02] 2026-04-25 23:31:24,840 | INFO     | ***************************************
[2026-04-25 19:32:02] 2026-04-25 23:31:24,840 | INFO     | 
[2026-04-25 19:32:02] 2026-04-25 23:31:24,842 | INFO     | architecture information:
[2026-04-25 19:32:02] 2026-04-25 23:31:24,843 | INFO     | executing command: cat /etc/os-release
[2026-04-25 19:32:02] 2026-04-25 23:31:24,863 | INFO     | cat /etc/os-release:
[2026-04-25 19:32:02] NAME="CentOS Linux"
[2026-04-25 19:32:02] VERSION="7 (Core)"
[2026-04-25 19:32:02] ID="centos"
[2026-04-25 19:32:02] ID_LIKE="rhel fedora"
[2026-04-25 19:32:02] VERSION_ID="7"
[2026-04-25 19:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 19:32:02] ANSI_COLOR="0;31"
[2026-04-25 19:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 19:32:02] HOME_URL="https://www.centos.org/"
[2026-04-25 19:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 19:32:02] 
[2026-04-25 19:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 19:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 19:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 19:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 19:32:02] 
[2026-04-25 19:32:02] 2026-04-25 23:31:24,864 | INFO     | ***************************************
[2026-04-25 19:32:02] 2026-04-25 23:31:25,369 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 19:32:02] 2026-04-25 23:31:25,586 | INFO     | sufficient remaining disk space (75657904128 B)
[2026-04-25 19:32:02] 2026-04-25 23:31:25,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 19:32:02] 2026-04-25 23:31:25,587 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 19:32:02] 2026-04-25 23:31:25,587 | INFO     | update_server=False
[2026-04-25 19:32:02] 2026-04-25 23:31:25,587 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 19:32:02] 2026-04-25 23:31:25,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 19:32:02] 2026-04-25 23:31:25,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 19:32:02] 2026-04-25 23:31:25,794 | INFO     | aborting loop
[2026-04-25 19:32:02] 2026-04-25 23:31:25,836 | INFO     | all payload control threads have been joined
[2026-04-25 19:32:02] 2026-04-25 23:31:26,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 19:32:02] 2026-04-25 23:31:26,245 | INFO     | all data control threads have been joined
[2026-04-25 19:32:02] 2026-04-25 23:31:26,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 19:32:02] 2026-04-25 23:31:26,555 | INFO     | all job control threads have been joined
[2026-04-25 19:32:02] 2026-04-25 23:31:26,593 | INFO     | [job] retrieve thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:26,800 | INFO     | [job] job monitor thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:26,842 | INFO     | [payload] control thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:26,895 | INFO     | [data] copytool_in thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:26,896 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:26,906 | INFO     | [job] validate thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,007 | INFO     | [payload] validate_post thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,139 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,255 | INFO     | [data] control thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,420 | INFO     | [payload] failed_post thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,517 | INFO     | [job] queue monitor thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,561 | INFO     | [job] control thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,614 | INFO     | [data] copytool_out thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,628 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:27,708 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:29,404 [wrapper] supervise_pilot (15 min periods counter: 37)
[2026-04-25 19:32:02] 2026-04-25 23:31:30,184 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 19:32:02] 2026-04-25 23:31:46,216 | INFO     | [monitor] cgroup control has ended
[2026-04-25 19:32:02] 2026-04-25 23:31:47,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238481839936)>', '<ExcThread(monitor, started 140237888005888)>']
[2026-04-25 19:32:02] 2026-04-25 23:31:52,630 | INFO     | all workflow threads have been joined
[2026-04-25 19:32:02] 2026-04-25 23:31:52,630 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 19:32:02] 2026-04-25 23:31:52,630 | INFO     | traces error code: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:52,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 19:32:02] 2026-04-25 23:31:57,883 | INFO     | PID=2239559 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 19:32:02] 2026-04-25 23:31:57,884 | INFO     | .. there are 42 such processes running
[2026-04-25 19:32:02] 2026-04-25 23:31:57,890 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 19:32:02] 2026-04-25 23:31:57,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 19:32:02] 2026-04-25 23:31:57,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 19:32:02] 2026-04-25 23:31:57,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 19:32:02] 2026-04-25 23:31:57,891 | INFO     | [monitor] control thread has ended
[2026-04-25 19:32:02] 2026-04-25 23:31:59,507 [wrapper] ==== pilot stdout END ====
[2026-04-25 19:32:02] 2026-04-25 23:31:59,590 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 19:32:02] 2026-04-25 23:31:59,615 [wrapper] pilotpid: 2239559
[2026-04-25 19:32:02] 2026-04-25 23:31:59,635 [wrapper] Pilot exit status: 0
[2026-04-25 19:32:02] 2026-04-25 23:31:59,924 [wrapper] pandaids: 7114618484
[2026-04-25 19:32:02] 2026-04-25 23:32:01,138 [wrapper] cleanup supervisor_pilot  425886 2239561
[2026-04-25 19:32:02] 2026-04-25 23:32:01,211 [wrapper] Test setup, not cleaning
[2026-04-25 19:32:02] 2026-04-25 23:32:01,262 [wrapper] apfmon messages muted
[2026-04-25 19:32:02] 2026-04-25 23:32:01,340 [wrapper] ==== wrapper stdout END ====
[2026-04-25 19:32:02] 2026-04-25 23:32:01,430 [wrapper] ==== wrapper stderr END ====
[2026-04-25 19:32:02]  *** Error codes and diagnostics ***
[2026-04-25 19:32:02]     "exeErrorCode": 0,
[2026-04-25 19:32:02]     "pilotErrorCode": 0,
[2026-04-25 19:32:02]  *** Listing of results directory ***
[2026-04-25 19:32:02] total 501652
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 07:58 pilot3.tar.gz
[2026-04-25 19:32:02] -rwx------. 1 boincer umatlas     36322 Apr 25 08:12 runpilot2-wrapper.sh
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 08:18 queuedata.json
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas       100 Apr 25 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 19:32:02] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 10:30 run_atlas
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas       105 Apr 25 10:30 job.xml
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas 319389469 Apr 25 10:30 EVNT.48750981._000002.pool.root.1
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 10:30 start_atlas.sh
[2026-04-25 19:32:02] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 10:30 shared
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas    697392 Apr 25 10:30 input.tar.gz
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas         0 Apr 25 10:30 boinc_lockfile
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas      2509 Apr 25 10:30 pandaJob.out
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas        57 Apr 25 10:30 setup.sh.local
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas    997235 Apr 25 10:31 agis_schedconf.cvmfs.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas       439 Apr 25 10:31 workernode_map.json
[2026-04-25 19:32:02] drwx------. 5 boincer umatlas      4096 Apr 25 10:31 pilot3
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas 184590476 Apr 25 19:28 HITS.49860624._000026.pool.root.1
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas       489 Apr 25 19:28 boinc_task_state.xml
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas      6573 Apr 25 19:28 init_data.xml
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas      1043 Apr 25 19:30 memory_monitor_summary.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas   1509089 Apr 25 19:31 agis_ddmendpoints.agis.ALL.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas    503138 Apr 25 19:31 log.49860624._000026.job.log.tgz.1
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas      6397 Apr 25 19:31 heartbeat_new.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas      6288 Apr 25 19:31 heartbeat.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas        95 Apr 25 19:31 pilot_heartbeat.json
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas       823 Apr 25 19:31 pilotlog.txt
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas        28 Apr 25 19:31 wrapper_checkpoint.txt
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas      8192 Apr 25 19:31 boinc_mmap_file
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas   2286480 Apr 25 19:32 log.49860624._000026.job.log.1
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas       357 Apr 25 19:32 output.list
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas       410 Apr 25 19:32 runtime_log
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas   2805760 Apr 25 19:32 result.tar.gz
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas      8955 Apr 25 19:32 runtime_log.err
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas       656 Apr 25 19:32 af90698457a7.diag
[2026-04-25 19:32:02] -rw-r--r--. 1 boincer umatlas     21135 Apr 25 19:32 stderr.txt
[2026-04-25 19:32:02] HITS file was successfully produced:
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas 184590476 Apr 25 19:28 shared/HITS.pool.root.1
[2026-04-25 19:32:02]  *** Contents of shared directory: ***
[2026-04-25 19:32:02] total 495620
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas 319389469 Apr 25 10:30 ATLAS.root_0
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 10:30 start_atlas.sh
[2026-04-25 19:32:02] -rw-r--r--. 2 boincer umatlas    697392 Apr 25 10:30 input.tar.gz
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas 184590476 Apr 25 19:28 HITS.pool.root.1
[2026-04-25 19:32:02] -rw-------. 1 boincer umatlas   2805760 Apr 25 19:32 result.tar.gz
19:32:04 (2232903): run_atlas exited; CPU time 46589.868545
19:32:04 (2232903): called boinc_finish(0)

</stderr_txt>
]]>

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