Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:31 (2072): wrapper (7.7.26015): starting
14:56:31 (2072): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 14:56:31] Arguments: --nthreads 8
[2026-04-25 14:56:31] Threads: 8
[2026-04-25 14:56:31] Checking for CVMFS
[2026-04-25 14:56:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 14:56:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 14:56:34] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 14:56:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 14:56:35] 2.11.2.0 15377 14159 96032 158849 2 53 22119895 25165825 3225 130560 0 5124141 99.749 5355900 15023 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-25 14:56:35] CVMFS is ok
[2026-04-25 14:56:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 14:56:35] Checking for apptainer binary...
[2026-04-25 14:56:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 14:56:35] Running /usr/bin/apptainer --version
[2026-04-25 14:56:35] apptainer version 1.3.2-1.el7
[2026-04-25 14:56:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 14:56:41] cg-vwn467.simple-grid.lan
[2026-04-25 14:56:41] apptainer works
[2026-04-25 14:56:41] Set ATHENA_PROC_NUMBER=8
[2026-04-25 14:56:41] Set ATHENA_CORE_NUMBER=8
[2026-04-25 14:56:41] Starting ATLAS job with PandaID=7114611370
[2026-04-25 14:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 20:51:20]  *** The last 200 lines of the pilot log: ***
[2026-04-25 20:51:20] 2026-04-25 18:50:31,036 | INFO     | this job has now completed (state=finished)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,036 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,036 | INFO     | log transfer has been attempted: DONE
[2026-04-25 20:51:20] 2026-04-25 18:50:31,036 | INFO     | job 7114611370 has finished - writing final server update
[2026-04-25 20:51:20] 2026-04-25 18:50:31,036 | INFO     | total number of processed events: 400 (read)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,038 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7114611370/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,039 | INFO     | extracted standard info from prmon json
[2026-04-25 20:51:20] 2026-04-25 18:50:31,039 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 20:51:20] 2026-04-25 18:50:31,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 20:51:20] 2026-04-25 18:50:31,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 20:51:20] 2026-04-25 18:50:31,046 | INFO     | fitting pss+swap vs Time
[2026-04-25 20:51:20] 2026-04-25 18:50:31,046 | INFO     | sum of square deviations: 12403750705.5
[2026-04-25 20:51:20] 2026-04-25 18:50:31,050 | INFO     | sum of deviations: 50287969858.5
[2026-04-25 20:51:20] 2026-04-25 18:50:31,050 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,050 | INFO     | mean y: 2506490.3596491227
[2026-04-25 20:51:20] 2026-04-25 18:50:31,050 | INFO     | intersect: 2506490.3596491227
[2026-04-25 20:51:20] 2026-04-25 18:50:31,051 | INFO     | chi2: 2.6091365241261504
[2026-04-25 20:51:20] 2026-04-25 18:50:31,052 | INFO     | sum of square deviations: 11867638328.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,055 | INFO     | sum of deviations: 72224644952.9999
[2026-04-25 20:51:20] 2026-04-25 18:50:31,055 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,055 | INFO     | mean y: 2512653.044510386
[2026-04-25 20:51:20] 2026-04-25 18:50:31,056 | INFO     | intersect: 2512653.044510386
[2026-04-25 20:51:20] 2026-04-25 18:50:31,056 | INFO     | chi2: 1.8391361355762816
[2026-04-25 20:51:20] 2026-04-25 18:50:31,056 | INFO     | current chi2=1.8391361355762816 (change=29.51169405777862 %)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,057 | INFO     | sum of square deviations: 11347200663.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,061 | INFO     | sum of deviations: 70862107991.50006
[2026-04-25 20:51:20] 2026-04-25 18:50:31,061 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,061 | INFO     | mean y: 2512253.762048193
[2026-04-25 20:51:20] 2026-04-25 18:50:31,061 | INFO     | intersect: 2512253.762048193
[2026-04-25 20:51:20] 2026-04-25 18:50:31,062 | INFO     | chi2: 1.8396137947822284
[2026-04-25 20:51:20] 2026-04-25 18:50:31,062 | INFO     | current chi2=1.8396137947822284 (change=-0.025971933056337198 %)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,062 | INFO     | right removable region: 331
[2026-04-25 20:51:20] 2026-04-25 18:50:31,062 | INFO     | sum of square deviations: 11867638328.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,066 | INFO     | sum of deviations: -11682053270.000002
[2026-04-25 20:51:20] 2026-04-25 18:50:31,066 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,066 | INFO     | mean y: 2524011.8397626113
[2026-04-25 20:51:20] 2026-04-25 18:50:31,066 | INFO     | intersect: 2524011.8397626113
[2026-04-25 20:51:20] 2026-04-25 18:50:31,067 | INFO     | chi2: 0.8263469907828823
[2026-04-25 20:51:20] 2026-04-25 18:50:31,070 | INFO     | current chi2=0.8263469907828823 (change=68.32871782898974 %)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,071 | INFO     | sum of square deviations: 11347200663.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,074 | INFO     | sum of deviations: -7966940044.499998
[2026-04-25 20:51:20] 2026-04-25 18:50:31,074 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,074 | INFO     | mean y: 2522907.1596385543
[2026-04-25 20:51:20] 2026-04-25 18:50:31,074 | INFO     | intersect: 2522907.1596385543
[2026-04-25 20:51:20] 2026-04-25 18:50:31,075 | INFO     | chi2: 0.806063037842876
[2026-04-25 20:51:20] 2026-04-25 18:50:31,075 | INFO     | current chi2=0.806063037842876 (change=2.4546532106069923 %)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,075 | INFO     | left removable region: 10
[2026-04-25 20:51:20] 2026-04-25 18:50:31,076 | INFO     | sum of square deviations: 10256266720.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,079 | INFO     | sum of deviations: 13589679857.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,079 | INFO     | mean x (centered): 0.0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,079 | INFO     | mean y: 2529328.847352025
[2026-04-25 20:51:20] 2026-04-25 18:50:31,079 | INFO     | intersect: 2529328.847352025
[2026-04-25 20:51:20] 2026-04-25 18:50:31,080 | INFO     | chi2: 0.020344863990319033
[2026-04-25 20:51:20] 2026-04-25 18:50:31,080 | INFO     | current memory leak: 1.33 B/s (using 321 data points, chi2=0.02)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,080 | INFO     | could have reported an average CPU frequency of 2250 MHz (15 samples)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | ..............................
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . Timing measurements:
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . get job = 0 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . initial setup = 73 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . payload setup = 80 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . stage-in = 0 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . payload execution = 20892 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . stage-out = 1 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,081 | INFO     | . log creation = 0 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,082 | INFO     | ..............................
[2026-04-25 20:51:20] 2026-04-25 18:50:31,214 | INFO     | 
[2026-04-25 20:51:20] 2026-04-25 18:50:31,214 | INFO     | job summary report
[2026-04-25 20:51:20] 2026-04-25 18:50:31,214 | INFO     | --------------------------------------------------
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | PanDA job id: 7114611370
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | task id: 49275507
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | errors: (none)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | pilot state: finished 
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | transexitcode: 0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | exeerrorcode: 0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | exeerrordiag: 
[2026-04-25 20:51:20] 2026-04-25 18:50:31,215 | INFO     | exitcode: 0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | exitmsg: OK
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | cpuconsumptiontime: 86380 s
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | nevents: 400
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | neventsw: 0
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | pid: 11175
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | pgrp: 11175
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | corecount: 8
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | event service: False
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | sizes: {0: 2273993, 1: 2274678, 2: 2276507, 12: 2276507, 20976: 2310065, 20978: 2319247, 20981: 2319385}
[2026-04-25 20:51:20] 2026-04-25 18:50:31,216 | INFO     | --------------------------------------------------
[2026-04-25 20:51:20] 2026-04-25 18:50:31,217 | INFO     | 
[2026-04-25 20:51:20] 2026-04-25 18:50:31,217 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-25 20:51:20] 2026-04-25 18:50:31,283 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,285 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 20:51:20] 2026-04-25 18:50:31,286 | INFO     | job 7114611370 has completed (purged errors)
[2026-04-25 20:51:20] 2026-04-25 18:50:31,286 | INFO     | overall cleanup function is called
[2026-04-25 20:51:20] 2026-04-25 18:50:32,293 | INFO     | --- collectZombieJob: --- 10, [11175]
[2026-04-25 20:51:20] 2026-04-25 18:50:32,294 | INFO     | zombie collector waiting for pid 11175
[2026-04-25 20:51:20] 2026-04-25 18:50:32,294 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 20:51:20] 2026-04-25 18:50:32,294 | INFO     | collected zombie processes
[2026-04-25 20:51:20] 2026-04-25 18:50:32,294 | INFO     | will attempt to kill all subprocesses of pid=11175
[2026-04-25 20:51:20] 2026-04-25 18:50:32,450 | INFO     | process IDs to be killed: [11175] (in reverse order)
[2026-04-25 20:51:20] 2026-04-25 18:50:33,677 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 20:51:20] 2026-04-25 18:50:33,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 20:51:20] 2026-04-25 18:50:33,683 | INFO     | did not find any defunct processes belonging to 11175
[2026-04-25 20:51:20] 2026-04-25 18:50:33,688 | INFO     | did not find any defunct processes belonging to 11175
[2026-04-25 20:51:20] 2026-04-25 18:50:33,688 | INFO     | Ready for new job
[2026-04-25 20:51:20] 2026-04-25 18:50:33,690 | INFO     | ***************************************
[2026-04-25 20:51:20] 2026-04-25 18:50:33,690 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 20:51:20] 2026-04-25 18:50:33,690 | INFO     | ***************************************
[2026-04-25 20:51:20] 2026-04-25 18:50:33,690 | INFO     | 
[2026-04-25 20:51:20] 2026-04-25 18:50:33,691 | INFO     | pilot is running in a VM
[2026-04-25 20:51:20] 2026-04-25 18:50:33,691 | INFO     | architecture information:
[2026-04-25 20:51:20] 2026-04-25 18:50:33,691 | INFO     | executing command: cat /etc/os-release
[2026-04-25 20:51:20] 2026-04-25 18:50:34,057 | INFO     | cat /etc/os-release:
[2026-04-25 20:51:20] NAME="CentOS Linux"
[2026-04-25 20:51:20] VERSION="7 (Core)"
[2026-04-25 20:51:20] ID="centos"
[2026-04-25 20:51:20] ID_LIKE="rhel fedora"
[2026-04-25 20:51:20] VERSION_ID="7"
[2026-04-25 20:51:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 20:51:20] ANSI_COLOR="0;31"
[2026-04-25 20:51:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 20:51:20] HOME_URL="https://www.centos.org/"
[2026-04-25 20:51:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 20:51:20] 
[2026-04-25 20:51:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 20:51:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 20:51:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 20:51:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 20:51:20] 
[2026-04-25 20:51:20] 2026-04-25 18:50:34,057 | INFO     | ***************************************
[2026-04-25 20:51:20] 2026-04-25 18:50:34,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-25 20:51:20] 2026-04-25 18:50:34,852 | INFO     | sufficient remaining disk space (494883831808 B)
[2026-04-25 20:51:20] 2026-04-25 18:50:34,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 20:51:20] 2026-04-25 18:50:34,852 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 20:51:20] 2026-04-25 18:50:34,852 | INFO     | update_server=False
[2026-04-25 20:51:20] 2026-04-25 18:50:34,852 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 20:51:20] 2026-04-25 18:50:34,853 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 20:51:20] 2026-04-25 18:50:34,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 20:51:20] 2026-04-25 18:50:34,853 | INFO     | aborting loop
[2026-04-25 20:51:20] 2026-04-25 18:50:35,200 | INFO     | all job control threads have been joined
[2026-04-25 20:51:20] 2026-04-25 18:50:35,694 | INFO     | all data control threads have been joined
[2026-04-25 20:51:20] 2026-04-25 18:50:35,722 | INFO     | all payload control threads have been joined
[2026-04-25 20:51:20] 2026-04-25 18:50:35,857 | INFO     | [job] retrieve thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:35,859 | INFO     | [job] job monitor thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 20:51:20] 2026-04-25 18:50:36,206 | INFO     | [job] control thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,231 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 20:51:20] 2026-04-25 18:50:36,264 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,290 | INFO     | [data] copytool_in thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,592 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,700 | INFO     | [data] control thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,728 | INFO     | [payload] control thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,760 | INFO     | [payload] validate_post thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:36,910 | INFO     | [job] validate thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:37,188 | INFO     | [payload] failed_post thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:37,239 | INFO     | [job] queue monitor thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:37,293 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:38,175 | INFO     | [data] copytool_out thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:50:38,862 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 20:51:20] 2026-04-25 18:51:03,218 | INFO     | PID=6484 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-25 20:51:20] 2026-04-25 18:51:03,218 | INFO     | .. there are 9 such processes running
[2026-04-25 20:51:20] 2026-04-25 18:51:03,222 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 20:51:20] 2026-04-25 18:51:03,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 20:51:20] 2026-04-25 18:51:03,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 20:51:20] 2026-04-25 18:51:13,535 | INFO     | [monitor] cgroup control has ended
[2026-04-25 20:51:20] 2026-04-25 18:51:15,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140056585725760)>', '<ExcThread(monitor, started 140056299812608)>']
[2026-04-25 20:51:20] 2026-04-25 18:51:16,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 20:51:20] 2026-04-25 18:51:16,298 | INFO     | [monitor] control thread has ended
[2026-04-25 20:51:20] 2026-04-25 18:51:20,561 | INFO     | all workflow threads have been joined
[2026-04-25 20:51:20] 2026-04-25 18:51:20,561 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 20:51:20] 2026-04-25 18:51:20,562 | INFO     | traces error code: 0
[2026-04-25 20:51:20] 2026-04-25 18:51:20,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 20:51:20] 2026-04-25 18:51:20,700 [wrapper] ==== pilot stdout END ====
[2026-04-25 20:51:20] 2026-04-25 18:51:20,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 20:51:20] 2026-04-25 18:51:20,709 [wrapper] pilotpid: 6484
[2026-04-25 20:51:20] 2026-04-25 18:51:20,713 [wrapper] Pilot exit status: 0
[2026-04-25 20:51:20] 2026-04-25 18:51:20,740 [wrapper] pandaids: 7114611370
[2026-04-25 20:51:20] 2026-04-25 18:51:20,791 [wrapper] cleanup supervisor_pilot 29766 6485
[2026-04-25 20:51:20] 2026-04-25 18:51:20,795 [wrapper] Test setup, not cleaning
[2026-04-25 20:51:20] 2026-04-25 18:51:20,797 [wrapper] apfmon messages muted
[2026-04-25 20:51:20] 2026-04-25 18:51:20,799 [wrapper] ==== wrapper stdout END ====
[2026-04-25 20:51:20] 2026-04-25 18:51:20,804 [wrapper] ==== wrapper stderr END ====
[2026-04-25 20:51:20]  *** Error codes and diagnostics ***
[2026-04-25 20:51:20]     "exeErrorCode": 0,
[2026-04-25 20:51:20]     "pilotErrorCode": 0,
[2026-04-25 20:51:20]  *** Listing of results directory ***
[2026-04-25 20:51:20] total 474512
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-25 20:51:20] -rwx------. 1 boinc boinc     36322 Apr 25 14:11 runpilot2-wrapper.sh
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:18 queuedata.json
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc       100 Apr 25 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 20:51:20] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 14:56 run_atlas
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc       105 Apr 25 14:56 job.xml
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc      6305 Apr 25 14:56 init_data.xml
[2026-04-25 20:51:20] -rw-r--r--. 2 boinc boinc 250628387 Apr 25 14:56 EVNT.49133116._000001.pool.root.1
[2026-04-25 20:51:20] -rw-r--r--. 2 boinc boinc     15667 Apr 25 14:56 start_atlas.sh
[2026-04-25 20:51:20] drwxrwx--x. 2 boinc boinc        68 Apr 25 14:56 shared
[2026-04-25 20:51:20] -rw-r--r--. 2 boinc boinc    697433 Apr 25 14:56 input.tar.gz
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc         0 Apr 25 14:56 boinc_lockfile
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc      2611 Apr 25 14:56 pandaJob.out
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc       413 Apr 25 15:00 workernode_map.json
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc    997243 Apr 25 15:00 agis_schedconf.cvmfs.json
[2026-04-25 20:51:20] drwx------. 5 boinc boinc      4096 Apr 25 15:00 pilot3
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc 226416377 Apr 25 20:49 HITS.49275507._000080.pool.root.1
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc       488 Apr 25 20:49 boinc_task_state.xml
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc      1012 Apr 25 20:50 memory_monitor_summary.json
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc   1509089 Apr 25 20:50 agis_ddmendpoints.agis.ALL.json
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc    454178 Apr 25 20:50 log.49275507._000080.job.log.tgz.1
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc      6316 Apr 25 20:50 heartbeat_new.json
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc      6207 Apr 25 20:50 heartbeat.json
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc      8192 Apr 25 20:50 boinc_mmap_file
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc        28 Apr 25 20:50 wrapper_checkpoint.txt
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc        95 Apr 25 20:51 pilot_heartbeat.json
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc      4882 Apr 25 20:51 pilotlog.txt
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc   1910926 Apr 25 20:51 log.49275507._000080.job.log.1
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc       357 Apr 25 20:51 output.list
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc       410 Apr 25 20:51 runtime_log
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc   2385920 Apr 25 20:51 result.tar.gz
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc      8439 Apr 25 20:51 runtime_log.err
[2026-04-25 20:51:20] -rw-------. 1 boinc boinc       657 Apr 25 20:51 af538c0e8440.diag
[2026-04-25 20:51:20] -rw-r--r--. 1 boinc boinc     20629 Apr 25 20:51 stderr.txt
[2026-04-25 20:51:20] HITS file was successfully produced:
[2026-04-25 20:51:21] -rw-------. 1 boinc boinc 226416377 Apr 25 20:49 shared/HITS.pool.root.1
[2026-04-25 20:51:21]  *** Contents of shared directory: ***
[2026-04-25 20:51:21] total 468900
[2026-04-25 20:51:21] -rw-r--r--. 2 boinc boinc 250628387 Apr 25 14:56 ATLAS.root_0
[2026-04-25 20:51:21] -rw-r--r--. 2 boinc boinc     15667 Apr 25 14:56 start_atlas.sh
[2026-04-25 20:51:21] -rw-r--r--. 2 boinc boinc    697433 Apr 25 14:56 input.tar.gz
[2026-04-25 20:51:21] -rw-------. 1 boinc boinc 226416377 Apr 25 20:49 HITS.pool.root.1
[2026-04-25 20:51:21] -rw-------. 1 boinc boinc   2385920 Apr 25 20:51 result.tar.gz
20:51:22 (2072): run_atlas exited; CPU time 86762.664808
20:51:22 (2072): called boinc_finish(0)

</stderr_txt>
]]>

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