Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:51:26 (30188): wrapper (7.7.26015): starting
20:51:26 (30188): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 20:51:26] Arguments: --nthreads 8
[2026-04-25 20:51:26] Threads: 8
[2026-04-25 20:51:26] Checking for CVMFS
[2026-04-25 20:51:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 20:51:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 20:51:28] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 20:51:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 20:51:28] 2.11.2.0 15377 14513 99612 158859 0 205 22468822 25165825 3703 130560 0 5237778 99.745 5464243 15030 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-25 20:51:28] CVMFS is ok
[2026-04-25 20:51:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 20:51:28] Checking for apptainer binary...
[2026-04-25 20:51:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 20:51:28] Running /usr/bin/apptainer --version
[2026-04-25 20:51:28] apptainer version 1.3.2-1.el7
[2026-04-25 20:51:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 20:51:29] cg-vwn467.simple-grid.lan
[2026-04-25 20:51:29] apptainer works
[2026-04-25 20:51:29] Set ATHENA_PROC_NUMBER=8
[2026-04-25 20:51:29] Set ATHENA_CORE_NUMBER=8
[2026-04-25 20:51:29] Starting ATLAS job with PandaID=7114611322
[2026-04-25 20:51:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 02:19:43]  *** The last 200 lines of the pilot log: ***
[2026-04-26 02:19:43] 2026-04-26 00:18:57,205 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-26 02:19:43] 2026-04-26 00:18:58,942 | INFO     | monitor loop #1451: job 0:7114611322 is in state 'finished'
[2026-04-26 02:19:43] 2026-04-26 00:18:58,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,089 | INFO     | job 7114611322 has state=finished
[2026-04-26 02:19:43] 2026-04-26 00:18:59,090 | INFO     | preparing for final server update for job 7114611322 in state='finished'
[2026-04-26 02:19:43] 2026-04-26 00:18:59,090 | INFO     | reading metadata from: /var/lib/boinc/slots/6/PanDA_Pilot-7114611322/jobReport.json
[2026-04-26 02:19:43] 2026-04-26 00:18:59,093 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/6/workernode_map.json
[2026-04-26 02:19:43] 2026-04-26 00:18:59,093 | INFO     | this job has now completed (state=finished)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,093 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,093 | INFO     | log transfer has been attempted: DONE
[2026-04-26 02:19:43] 2026-04-26 00:18:59,093 | INFO     | job 7114611322 has finished - writing final server update
[2026-04-26 02:19:43] 2026-04-26 00:18:59,094 | INFO     | total number of processed events: 400 (read)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,096 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7114611322/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,096 | INFO     | extracted standard info from prmon json
[2026-04-26 02:19:43] 2026-04-26 00:18:59,096 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 02:19:43] 2026-04-26 00:18:59,097 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 02:19:43] 2026-04-26 00:18:59,097 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 02:19:43] 2026-04-26 00:18:59,103 | INFO     | fitting pss+swap vs Time
[2026-04-26 02:19:43] 2026-04-26 00:18:59,103 | INFO     | sum of square deviations: 10256266720.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,107 | INFO     | sum of deviations: 33375022354.00001
[2026-04-26 02:19:43] 2026-04-26 00:18:59,107 | INFO     | mean x (centered): 0.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,107 | INFO     | mean y: 2525076.336448598
[2026-04-26 02:19:43] 2026-04-26 00:18:59,107 | INFO     | intersect: 2525076.336448598
[2026-04-26 02:19:43] 2026-04-26 00:18:59,107 | INFO     | chi2: 1.6314069561203415
[2026-04-26 02:19:43] 2026-04-26 00:18:59,108 | INFO     | sum of square deviations: 9784425315.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,111 | INFO     | sum of deviations: 32597473806.500008
[2026-04-26 02:19:43] 2026-04-26 00:18:59,111 | INFO     | mean x (centered): 0.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,111 | INFO     | mean y: 2524824.825949367
[2026-04-26 02:19:43] 2026-04-26 00:18:59,111 | INFO     | intersect: 2524824.825949367
[2026-04-26 02:19:43] 2026-04-26 00:18:59,112 | INFO     | chi2: 1.631835464759582
[2026-04-26 02:19:43] 2026-04-26 00:18:59,112 | INFO     | current chi2=1.631835464759582 (change=-0.02626620155277736 %)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,112 | INFO     | right removable region: 315
[2026-04-26 02:19:43] 2026-04-26 00:18:59,113 | INFO     | sum of square deviations: 9784425315.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,116 | INFO     | sum of deviations: -17304857193.5
[2026-04-26 02:19:43] 2026-04-26 00:18:59,116 | INFO     | mean x (centered): 0.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,117 | INFO     | mean y: 2541338.389240506
[2026-04-26 02:19:43] 2026-04-26 00:18:59,117 | INFO     | intersect: 2541338.389240506
[2026-04-26 02:19:43] 2026-04-26 00:18:59,117 | INFO     | chi2: 0.1258267420708408
[2026-04-26 02:19:43] 2026-04-26 00:18:59,118 | INFO     | current chi2=0.1258267420708408 (change=92.28722535485136 %)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,118 | INFO     | sum of square deviations: 9327281860.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,121 | INFO     | sum of deviations: -14374699593.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,121 | INFO     | mean x (centered): 0.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,121 | INFO     | mean y: 2540342.038585209
[2026-04-26 02:19:43] 2026-04-26 00:18:59,122 | INFO     | intersect: 2540342.038585209
[2026-04-26 02:19:43] 2026-04-26 00:18:59,122 | INFO     | chi2: 0.10774232716057519
[2026-04-26 02:19:43] 2026-04-26 00:18:59,122 | INFO     | current chi2=0.10774232716057519 (change=14.372473301489466 %)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,122 | INFO     | left removable region: 10
[2026-04-26 02:19:43] 2026-04-26 00:18:59,123 | INFO     | sum of square deviations: 8797783560.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,126 | INFO     | sum of deviations: -14421457861.999998
[2026-04-26 02:19:43] 2026-04-26 00:18:59,126 | INFO     | mean x (centered): 0.0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,126 | INFO     | mean y: 2540325.613114754
[2026-04-26 02:19:43] 2026-04-26 00:18:59,126 | INFO     | intersect: 2540325.613114754
[2026-04-26 02:19:43] 2026-04-26 00:18:59,127 | INFO     | chi2: 0.10746744925901727
[2026-04-26 02:19:43] 2026-04-26 00:18:59,127 | INFO     | current memory leak: -1.64 B/s (using 305 data points, chi2=0.11)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,128 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,128 | INFO     | ..............................
[2026-04-26 02:19:43] 2026-04-26 00:18:59,128 | INFO     | . Timing measurements:
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . get job = 0 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . initial setup = 11 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . payload setup = 15 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . stage-in = 0 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . payload execution = 19581 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . stage-out = 1 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | . log creation = 0 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,129 | INFO     | ..............................
[2026-04-26 02:19:43] 2026-04-26 00:18:59,234 | INFO     | 
[2026-04-26 02:19:43] 2026-04-26 00:18:59,234 | INFO     | job summary report
[2026-04-26 02:19:43] 2026-04-26 00:18:59,234 | INFO     | --------------------------------------------------
[2026-04-26 02:19:43] 2026-04-26 00:18:59,234 | INFO     | PanDA job id: 7114611322
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | task id: 49269385
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | errors: (none)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | pilot state: finished 
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | transexitcode: 0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | exeerrorcode: 0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | exeerrordiag: 
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | exitcode: 0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | exitmsg: OK
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | cpuconsumptiontime: 97008 s
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | nevents: 400
[2026-04-26 02:19:43] 2026-04-26 00:18:59,235 | INFO     | neventsw: 0
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | pid: 6455
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | pgrp: 6455
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | corecount: 8
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | event service: False
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | sizes: {0: 2274611, 1: 2276440, 11: 2276440, 19601: 2309540, 19602: 2318538, 19603: 2318594, 19605: 2318916}
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | --------------------------------------------------
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | 
[2026-04-26 02:19:43] 2026-04-26 00:18:59,236 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-04-26 02:19:43] 2026-04-26 00:18:59,260 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,260 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,262 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,263 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 02:19:43] 2026-04-26 00:18:59,263 | INFO     | job 7114611322 has completed (purged errors)
[2026-04-26 02:19:43] 2026-04-26 00:18:59,263 | INFO     | overall cleanup function is called
[2026-04-26 02:19:43] 2026-04-26 00:19:00,271 | INFO     | --- collectZombieJob: --- 10, [6455]
[2026-04-26 02:19:43] 2026-04-26 00:19:00,271 | INFO     | zombie collector waiting for pid 6455
[2026-04-26 02:19:43] 2026-04-26 00:19:00,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 02:19:43] 2026-04-26 00:19:00,272 | INFO     | collected zombie processes
[2026-04-26 02:19:43] 2026-04-26 00:19:00,272 | INFO     | will attempt to kill all subprocesses of pid=6455
[2026-04-26 02:19:43] 2026-04-26 00:19:00,339 | INFO     | process IDs to be killed: [6455] (in reverse order)
[2026-04-26 02:19:43] 2026-04-26 00:19:00,386 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 02:19:43] 2026-04-26 00:19:00,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 02:19:43] 2026-04-26 00:19:00,389 | INFO     | did not find any defunct processes belonging to 6455
[2026-04-26 02:19:43] 2026-04-26 00:19:00,391 | INFO     | did not find any defunct processes belonging to 6455
[2026-04-26 02:19:43] 2026-04-26 00:19:00,391 | INFO     | Ready for new job
[2026-04-26 02:19:43] 2026-04-26 00:19:00,393 | INFO     | ***************************************
[2026-04-26 02:19:43] 2026-04-26 00:19:00,393 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 02:19:43] 2026-04-26 00:19:00,394 | INFO     | ***************************************
[2026-04-26 02:19:43] 2026-04-26 00:19:00,394 | INFO     | 
[2026-04-26 02:19:43] 2026-04-26 00:19:00,394 | INFO     | pilot is running in a VM
[2026-04-26 02:19:43] 2026-04-26 00:19:00,394 | INFO     | architecture information:
[2026-04-26 02:19:43] 2026-04-26 00:19:00,395 | INFO     | executing command: cat /etc/os-release
[2026-04-26 02:19:43] 2026-04-26 00:19:00,417 | INFO     | cat /etc/os-release:
[2026-04-26 02:19:43] NAME="CentOS Linux"
[2026-04-26 02:19:43] VERSION="7 (Core)"
[2026-04-26 02:19:43] ID="centos"
[2026-04-26 02:19:43] ID_LIKE="rhel fedora"
[2026-04-26 02:19:43] VERSION_ID="7"
[2026-04-26 02:19:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 02:19:43] ANSI_COLOR="0;31"
[2026-04-26 02:19:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 02:19:43] HOME_URL="https://www.centos.org/"
[2026-04-26 02:19:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 02:19:43] 
[2026-04-26 02:19:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 02:19:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 02:19:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 02:19:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 02:19:43] 
[2026-04-26 02:19:43] 2026-04-26 00:19:00,418 | INFO     | ***************************************
[2026-04-26 02:19:43] 2026-04-26 00:19:00,921 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-04-26 02:19:43] 2026-04-26 00:19:00,942 | INFO     | sufficient remaining disk space (497696112640 B)
[2026-04-26 02:19:43] 2026-04-26 00:19:00,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 02:19:43] 2026-04-26 00:19:00,943 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 02:19:43] 2026-04-26 00:19:00,943 | INFO     | update_server=False
[2026-04-26 02:19:43] 2026-04-26 00:19:00,943 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 02:19:43] 2026-04-26 00:19:00,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 02:19:43] 2026-04-26 00:19:00,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 02:19:43] 2026-04-26 00:19:00,944 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 02:19:43] 2026-04-26 00:19:00,945 | INFO     | aborting loop
[2026-04-26 02:19:43] 2026-04-26 00:19:01,173 | INFO     | all data control threads have been joined
[2026-04-26 02:19:43] 2026-04-26 00:19:01,947 | INFO     | [job] retrieve thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:01,947 | INFO     | all payload control threads have been joined
[2026-04-26 02:19:43] 2026-04-26 00:19:01,949 | INFO     | [job] queue monitor thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:01,950 | INFO     | [job] job monitor thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:01,984 | INFO     | [job] validate thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,179 | INFO     | [data] control thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,319 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,350 | INFO     | all job control threads have been joined
[2026-04-26 02:19:43] 2026-04-26 00:19:02,487 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,791 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,949 | INFO     | [data] copytool_out thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,953 | INFO     | [payload] control thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:02,995 | INFO     | [payload] validate_post thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:03,015 | INFO     | [data] copytool_in thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:03,127 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:03,160 | INFO     | [payload] failed_post thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:03,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 02:19:43] 2026-04-26 00:19:03,356 | INFO     | [job] control thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:07,321 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 02:19:43] 2026-04-26 00:19:31,004 | INFO     | PID=1768 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-26 02:19:43] 2026-04-26 00:19:31,004 | INFO     | .. there are 3 such processes running
[2026-04-26 02:19:43] 2026-04-26 00:19:31,004 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 02:19:43] 2026-04-26 00:19:31,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 02:19:43] 2026-04-26 00:19:31,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 02:19:43] 2026-04-26 00:19:36,648 | INFO     | [monitor] cgroup control has ended
[2026-04-26 02:19:43] 2026-04-26 00:19:37,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559389136704)>', '<ExcThread(monitor, started 140558836164352)>']
[2026-04-26 02:19:43] 2026-04-26 00:19:38,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 02:19:43] 2026-04-26 00:19:38,030 | INFO     | [monitor] control thread has ended
[2026-04-26 02:19:43] 2026-04-26 00:19:42,641 | INFO     | all workflow threads have been joined
[2026-04-26 02:19:43] 2026-04-26 00:19:42,641 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 02:19:43] 2026-04-26 00:19:42,641 | INFO     | traces error code: 0
[2026-04-26 02:19:43] 2026-04-26 00:19:42,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 02:19:43] 2026-04-26 00:19:42,775 [wrapper] ==== pilot stdout END ====
[2026-04-26 02:19:43] 2026-04-26 00:19:42,778 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 02:19:43] 2026-04-26 00:19:42,782 [wrapper] pilotpid: 1768
[2026-04-26 02:19:43] 2026-04-26 00:19:42,786 [wrapper] Pilot exit status: 0
[2026-04-26 02:19:43] 2026-04-26 00:19:42,801 [wrapper] pandaids: 7114611322
[2026-04-26 02:19:43] 2026-04-26 00:19:42,835 [wrapper] cleanup supervisor_pilot 21235 1769
[2026-04-26 02:19:43] 2026-04-26 00:19:42,839 [wrapper] Test setup, not cleaning
[2026-04-26 02:19:43] 2026-04-26 00:19:42,849 [wrapper] apfmon messages muted
[2026-04-26 02:19:43] 2026-04-26 00:19:42,852 [wrapper] ==== wrapper stdout END ====
[2026-04-26 02:19:43] 2026-04-26 00:19:42,855 [wrapper] ==== wrapper stderr END ====
[2026-04-26 02:19:43]  *** Error codes and diagnostics ***
[2026-04-26 02:19:43]     "exeErrorCode": 0,
[2026-04-26 02:19:43]     "pilotErrorCode": 0,
[2026-04-26 02:19:43]  *** Listing of results directory ***
[2026-04-26 02:19:43] total 476224
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc    683926 Apr 25 13:58 pilot3.tar.gz
[2026-04-26 02:19:43] -rwx------. 1 boinc boinc     36322 Apr 25 14:11 runpilot2-wrapper.sh
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc      5631 Apr 25 14:18 queuedata.json
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc       100 Apr 25 20:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 02:19:43] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 20:51 run_atlas
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc       105 Apr 25 20:51 job.xml
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc      6305 Apr 25 20:51 init_data.xml
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc 252332975 Apr 25 20:51 EVNT.49124299._000001.pool.root.1
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc     15667 Apr 25 20:51 start_atlas.sh
[2026-04-26 02:19:43] drwxrwx--x. 2 boinc boinc        68 Apr 25 20:51 shared
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc    697416 Apr 25 20:51 input.tar.gz
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc         0 Apr 25 20:51 boinc_lockfile
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc      2582 Apr 25 20:51 pandaJob.out
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc    997243 Apr 25 20:51 agis_schedconf.cvmfs.json
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc       413 Apr 25 20:52 workernode_map.json
[2026-04-26 02:19:43] drwx------. 5 boinc boinc      4096 Apr 25 20:52 pilot3
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc 226770058 Apr 26 02:18 HITS.49269385._000110.pool.root.1
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc       488 Apr 26 02:18 boinc_task_state.xml
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc        95 Apr 26 02:18 pilot_heartbeat.json
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc      1018 Apr 26 02:18 memory_monitor_summary.json
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc   1509089 Apr 26 02:18 agis_ddmendpoints.agis.ALL.json
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc    426676 Apr 26 02:18 log.49269385._000110.job.log.tgz.1
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc      6323 Apr 26 02:18 heartbeat_new.json
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc      6214 Apr 26 02:18 heartbeat.json
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc      8192 Apr 26 02:19 boinc_mmap_file
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc        28 Apr 26 02:19 wrapper_checkpoint.txt
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc      4882 Apr 26 02:19 pilotlog.txt
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc   1792393 Apr 26 02:19 log.49269385._000110.job.log.1
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc       357 Apr 26 02:19 output.list
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc       410 Apr 26 02:19 runtime_log
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc   2232320 Apr 26 02:19 result.tar.gz
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc      8439 Apr 26 02:19 runtime_log.err
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc       656 Apr 26 02:19 af535a0223bc.diag
[2026-04-26 02:19:43] -rw-r--r--. 1 boinc boinc     20865 Apr 26 02:19 stderr.txt
[2026-04-26 02:19:43] HITS file was successfully produced:
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc 226770058 Apr 26 02:18 shared/HITS.pool.root.1
[2026-04-26 02:19:43]  *** Contents of shared directory: ***
[2026-04-26 02:19:43] total 470756
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc 252332975 Apr 25 20:51 ATLAS.root_0
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc     15667 Apr 25 20:51 start_atlas.sh
[2026-04-26 02:19:43] -rw-r--r--. 2 boinc boinc    697416 Apr 25 20:51 input.tar.gz
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc 226770058 Apr 26 02:18 HITS.pool.root.1
[2026-04-26 02:19:43] -rw-------. 1 boinc boinc   2232320 Apr 26 02:19 result.tar.gz
02:19:44 (30188): run_atlas exited; CPU time 97258.515534
02:19:44 (30188): called boinc_finish(0)

</stderr_txt>
]]>

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