Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:34:21 (3668733): wrapper (7.7.26015): starting
07:34:21 (3668733): wrapper: running run_atlas (--nthreads 10)
[2026-04-25 07:34:21] Arguments: --nthreads 10
[2026-04-25 07:34:21] Threads: 10
[2026-04-25 07:34:21] Checking for CVMFS
[2026-04-25 07:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 07:34:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 07:34:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 07:34:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 07:34:22] 2.13.3.0 10955 175496 293268 158846 3 323 25398745 40960001 20157 16776704 0 408521111 99.712 395426744 34464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-25 07:34:22] CVMFS is ok
[2026-04-25 07:34:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 07:34:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 07:34:22] Further information can be found at the LHC@home message board.
[2026-04-25 07:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 07:34:22] Checking for apptainer binary...
[2026-04-25 07:34:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 07:34:22] Running /usr/bin/apptainer --version
[2026-04-25 07:34:22] apptainer version 1.4.5-2.el9
[2026-04-25 07:34:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 07:34:22] c-211-33-1.aglt2.org
[2026-04-25 07:34:22] apptainer works
[2026-04-25 07:34:22] Set ATHENA_PROC_NUMBER=10
[2026-04-25 07:34:22] Set ATHENA_CORE_NUMBER=10
[2026-04-25 07:34:22] Starting ATLAS job with PandaID=7105788530
[2026-04-25 07:34:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 14:51:47]  *** The last 200 lines of the pilot log: ***
[2026-04-25 14:51:47] 2026-04-25 18:50:56,787 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,787 | INFO     | log transfer has been attempted: DONE
[2026-04-25 14:51:47] 2026-04-25 18:50:56,787 | INFO     | job 7105788530 has finished - writing final server update
[2026-04-25 14:51:47] 2026-04-25 18:50:56,788 | INFO     | total number of processed events: 400 (read)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,828 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7105788530/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,829 | INFO     | extracted standard info from prmon json
[2026-04-25 14:51:47] 2026-04-25 18:50:56,829 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 14:51:47] 2026-04-25 18:50:56,830 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 14:51:47] 2026-04-25 18:50:56,830 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 14:51:47] 2026-04-25 18:50:56,870 | INFO     | fitting pss+swap vs Time
[2026-04-25 14:51:47] 2026-04-25 18:50:56,876 | INFO     | sum of square deviations: 24482375401.766808
[2026-04-25 14:51:47] 2026-04-25 18:50:56,885 | INFO     | sum of deviations: 136241263819.05374
[2026-04-25 14:51:47] 2026-04-25 18:50:56,885 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,886 | INFO     | mean y: 2538778.997668998
[2026-04-25 14:51:47] 2026-04-25 18:50:56,886 | INFO     | intersect: 2538778.997668998
[2026-04-25 14:51:47] 2026-04-25 18:50:56,887 | INFO     | chi2: 3.5643699640013473
[2026-04-25 14:51:47] 2026-04-25 18:50:56,887 | INFO     | sum of square deviations: 23636328212.64148
[2026-04-25 14:51:47] 2026-04-25 18:50:56,906 | INFO     | sum of deviations: 193690549460.8771
[2026-04-25 14:51:47] 2026-04-25 18:50:56,906 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,906 | INFO     | mean y: 2549058.775943396
[2026-04-25 14:51:47] 2026-04-25 18:50:56,906 | INFO     | intersect: 2549058.775943396
[2026-04-25 14:51:47] 2026-04-25 18:50:56,907 | INFO     | chi2: 1.9612945854249022
[2026-04-25 14:51:47] 2026-04-25 18:50:56,907 | INFO     | current chi2=1.9612945854249022 (change=44.974999642765454 %)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,908 | INFO     | sum of square deviations: 22809975848.625294
[2026-04-25 14:51:47] 2026-04-25 18:50:56,916 | INFO     | sum of deviations: 190631435683.70413
[2026-04-25 14:51:47] 2026-04-25 18:50:56,933 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,933 | INFO     | mean y: 2548494.1789976135
[2026-04-25 14:51:47] 2026-04-25 18:50:56,933 | INFO     | intersect: 2548494.1789976135
[2026-04-25 14:51:47] 2026-04-25 18:50:56,934 | INFO     | chi2: 1.9604159010612825
[2026-04-25 14:51:47] 2026-04-25 18:50:56,934 | INFO     | current chi2=1.9604159010612825 (change=0.04480124353320166 %)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,934 | INFO     | right removable region: 418
[2026-04-25 14:51:47] 2026-04-25 18:50:56,935 | INFO     | sum of square deviations: 23636156556.15099
[2026-04-25 14:51:47] 2026-04-25 18:50:56,944 | INFO     | sum of deviations: 56902811028.16965
[2026-04-25 14:51:47] 2026-04-25 18:50:56,944 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,944 | INFO     | mean y: 2553021.636792453
[2026-04-25 14:51:47] 2026-04-25 18:50:56,944 | INFO     | intersect: 2553021.636792453
[2026-04-25 14:51:47] 2026-04-25 18:50:56,949 | INFO     | chi2: 1.96944407052715
[2026-04-25 14:51:47] 2026-04-25 18:50:56,950 | INFO     | current chi2=1.96944407052715 (change=44.746362178513586 %)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,951 | INFO     | sum of square deviations: 22809684631.556164
[2026-04-25 14:51:47] 2026-04-25 18:50:56,959 | INFO     | sum of deviations: 32128143463.267296
[2026-04-25 14:51:47] 2026-04-25 18:50:56,959 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,959 | INFO     | mean y: 2557593.491646778
[2026-04-25 14:51:47] 2026-04-25 18:50:56,959 | INFO     | intersect: 2557593.491646778
[2026-04-25 14:51:47] 2026-04-25 18:50:56,964 | INFO     | chi2: 1.8748354766842108
[2026-04-25 14:51:47] 2026-04-25 18:50:56,965 | INFO     | current chi2=1.8748354766842108 (change=4.8038223201543335 %)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,965 | INFO     | left removable region: 10
[2026-04-25 14:51:47] 2026-04-25 18:50:56,966 | INFO     | sum of square deviations: 21060014243.33079
[2026-04-25 14:51:47] 2026-04-25 18:50:56,974 | INFO     | sum of deviations: 87324167280.60289
[2026-04-25 14:51:47] 2026-04-25 18:50:56,975 | INFO     | mean x (centered): 0.0
[2026-04-25 14:51:47] 2026-04-25 18:50:56,975 | INFO     | mean y: 2567936.1029411764
[2026-04-25 14:51:47] 2026-04-25 18:50:56,975 | INFO     | intersect: 2567936.1029411764
[2026-04-25 14:51:47] 2026-04-25 18:50:56,980 | INFO     | chi2: 0.2537601443829586
[2026-04-25 14:51:47] 2026-04-25 18:50:56,981 | INFO     | current memory leak: 4.15 B/s (using 408 data points, chi2=0.25)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,982 | INFO     | could have reported an average CPU frequency of 2523 MHz (18 samples)
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | ..............................
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . Timing measurements:
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . get job = 0 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . initial setup = 11 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . payload setup = 18 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . stage-in = 0 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . payload execution = 26132 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . stage-out = 7 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | . log creation = 1 s
[2026-04-25 14:51:47] 2026-04-25 18:50:56,983 | INFO     | ..............................
[2026-04-25 14:51:47] 2026-04-25 18:50:57,515 | INFO     | 
[2026-04-25 14:51:47] 2026-04-25 18:50:57,515 | INFO     | job summary report
[2026-04-25 14:51:47] 2026-04-25 18:50:57,515 | INFO     | --------------------------------------------------
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | PanDA job id: 7105788530
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | task id: 49263191
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | errors: (none)
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | pilot state: finished 
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | transexitcode: 0
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | exeerrorcode: 0
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | exeerrordiag: 
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | exitcode: 0
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | exitmsg: OK
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | cpuconsumptiontime: 54436 s
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | nevents: 400
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | neventsw: 0
[2026-04-25 14:51:47] 2026-04-25 18:50:57,516 | INFO     | pid: 3693184
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | pgrp: 3693184
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | corecount: 10
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | event service: False
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | sizes: {0: 2274661, 1: 2276490, 2: 2276490, 26155: 2312815, 26156: 2312814, 26164: 2322052, 26165: 2322190}
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | --------------------------------------------------
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | 
[2026-04-25 14:51:47] 2026-04-25 18:50:57,517 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-04-25 14:51:47] 2026-04-25 18:50:57,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | job 7105788530 has completed (purged errors)
[2026-04-25 14:51:47] 2026-04-25 18:50:57,628 | INFO     | overall cleanup function is called
[2026-04-25 14:51:47] 2026-04-25 18:50:58,667 | INFO     | --- collectZombieJob: --- 10, [3693184]
[2026-04-25 14:51:47] 2026-04-25 18:50:58,667 | INFO     | zombie collector waiting for pid 3693184
[2026-04-25 14:51:47] 2026-04-25 18:50:58,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 14:51:47] 2026-04-25 18:50:58,667 | INFO     | collected zombie processes
[2026-04-25 14:51:47] 2026-04-25 18:50:58,667 | INFO     | will attempt to kill all subprocesses of pid=3693184
[2026-04-25 14:51:47] 2026-04-25 18:51:00,468 | INFO     | PID=3677532 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-25 14:51:47] 2026-04-25 18:51:00,468 | INFO     | .. there are 16 such processes running
[2026-04-25 14:51:47] 2026-04-25 18:51:01,769 | INFO     | process IDs to be killed: [3693184] (in reverse order)
[2026-04-25 14:51:47] 2026-04-25 18:51:02,327 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 14:51:47] 2026-04-25 18:51:02,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 14:51:47] 2026-04-25 18:51:02,412 | INFO     | did not find any defunct processes belonging to 3693184
[2026-04-25 14:51:47] 2026-04-25 18:51:02,522 | INFO     | did not find any defunct processes belonging to 3693184
[2026-04-25 14:51:47] 2026-04-25 18:51:02,522 | INFO     | Ready for new job
[2026-04-25 14:51:47] 2026-04-25 18:51:02,544 | INFO     | ***************************************
[2026-04-25 14:51:47] 2026-04-25 18:51:02,544 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 14:51:47] 2026-04-25 18:51:02,544 | INFO     | ***************************************
[2026-04-25 14:51:47] 2026-04-25 18:51:02,544 | INFO     | 
[2026-04-25 14:51:47] 2026-04-25 18:51:02,588 | INFO     | architecture information:
[2026-04-25 14:51:47] 2026-04-25 18:51:02,595 | INFO     | executing command: cat /etc/os-release
[2026-04-25 14:51:47] 2026-04-25 18:51:02,855 | INFO     | cat /etc/os-release:
[2026-04-25 14:51:47] NAME="CentOS Linux"
[2026-04-25 14:51:47] VERSION="7 (Core)"
[2026-04-25 14:51:47] ID="centos"
[2026-04-25 14:51:47] ID_LIKE="rhel fedora"
[2026-04-25 14:51:47] VERSION_ID="7"
[2026-04-25 14:51:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 14:51:47] ANSI_COLOR="0;31"
[2026-04-25 14:51:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 14:51:47] HOME_URL="https://www.centos.org/"
[2026-04-25 14:51:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 14:51:47] 
[2026-04-25 14:51:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 14:51:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 14:51:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 14:51:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 14:51:47] 
[2026-04-25 14:51:47] 2026-04-25 18:51:02,855 | INFO     | ***************************************
[2026-04-25 14:51:47] 2026-04-25 18:51:03,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-04-25 14:51:47] 2026-04-25 18:51:03,423 | INFO     | sufficient remaining disk space (124058075136 B)
[2026-04-25 14:51:47] 2026-04-25 18:51:03,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 14:51:47] 2026-04-25 18:51:03,424 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 14:51:47] 2026-04-25 18:51:03,424 | INFO     | update_server=False
[2026-04-25 14:51:47] 2026-04-25 18:51:03,424 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 14:51:47] 2026-04-25 18:51:03,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 14:51:47] 2026-04-25 18:51:03,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 14:51:47] 2026-04-25 18:51:03,429 | INFO     | aborting loop
[2026-04-25 14:51:47] 2026-04-25 18:51:03,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 14:51:47] 2026-04-25 18:51:03,447 | INFO     | all job control threads have been joined
[2026-04-25 14:51:47] 2026-04-25 18:51:03,548 | INFO     | all payload control threads have been joined
[2026-04-25 14:51:47] 2026-04-25 18:51:03,857 | INFO     | all data control threads have been joined
[2026-04-25 14:51:47] 2026-04-25 18:51:04,431 | INFO     | [job] retrieve thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,435 | INFO     | [job] job monitor thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,439 | INFO     | [job] queue monitor thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,453 | INFO     | [job] control thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,545 | INFO     | [payload] failed_post thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,554 | INFO     | [payload] control thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,693 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:04,710 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 14:51:47] 2026-04-25 18:51:04,863 | INFO     | [data] control thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,209 | INFO     | [job] validate thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,231 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,235 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,255 | INFO     | [data] copytool_in thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,358 | INFO     | [payload] validate_post thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:05,684 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:06,728 | INFO     | [data] copytool_out thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:07,449 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 14:51:47] 2026-04-25 18:51:36,400 | INFO     | PID=3677532 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 14:51:47] 2026-04-25 18:51:36,401 | INFO     | .. there are 16 such processes running
[2026-04-25 14:51:47] 2026-04-25 18:51:36,401 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 14:51:47] 2026-04-25 18:51:36,401 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 14:51:47] 2026-04-25 18:51:36,401 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 14:51:47] 2026-04-25 18:51:37,009 | INFO     | [monitor] cgroup control has ended
[2026-04-25 14:51:47] 2026-04-25 18:51:38,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013909555008)>', '<ExcThread(monitor, started 140013383710464)>']
[2026-04-25 14:51:47] 2026-04-25 18:51:39,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 14:51:47] 2026-04-25 18:51:39,426 | INFO     | [monitor] control thread has ended
[2026-04-25 14:51:47] 2026-04-25 18:51:43,556 | INFO     | all workflow threads have been joined
[2026-04-25 14:51:47] 2026-04-25 18:51:43,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 14:51:47] 2026-04-25 18:51:43,556 | INFO     | traces error code: 0
[2026-04-25 14:51:47] 2026-04-25 18:51:43,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 14:51:47] 2026-04-25 18:51:46,075 [wrapper] ==== pilot stdout END ====
[2026-04-25 14:51:47] 2026-04-25 18:51:46,104 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 14:51:47] 2026-04-25 18:51:46,117 [wrapper] pilotpid: 3677532
[2026-04-25 14:51:47] 2026-04-25 18:51:46,142 [wrapper] Pilot exit status: 0
[2026-04-25 14:51:47] 2026-04-25 18:51:46,283 [wrapper] pandaids: 7105788530
[2026-04-25 14:51:47] 2026-04-25 18:51:46,784 [wrapper] cleanup supervisor_pilot  285378 3677533
[2026-04-25 14:51:47] 2026-04-25 18:51:46,790 [wrapper] Test setup, not cleaning
[2026-04-25 14:51:47] 2026-04-25 18:51:46,795 [wrapper] apfmon messages muted
[2026-04-25 14:51:47] 2026-04-25 18:51:46,799 [wrapper] ==== wrapper stdout END ====
[2026-04-25 14:51:47] 2026-04-25 18:51:46,804 [wrapper] ==== wrapper stderr END ====
[2026-04-25 14:51:47]  *** Error codes and diagnostics ***
[2026-04-25 14:51:47]     "exeErrorCode": 0,
[2026-04-25 14:51:47]     "pilotErrorCode": 0,
[2026-04-25 14:51:47]  *** Listing of results directory ***
[2026-04-25 14:51:47] total 411836
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 06:46 pilot3.tar.gz
[2026-04-25 14:51:47] -rwx------. 1 boincer umatlas     36322 Apr 25 07:28 runpilot2-wrapper.sh
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 07:29 queuedata.json
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas       100 Apr 25 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 14:51:47] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 07:34 run_atlas
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas       105 Apr 25 07:34 job.xml
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas 222550180 Apr 25 07:34 EVNT.49263189._000787.pool.root.1
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:34 start_atlas.sh
[2026-04-25 14:51:47] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 07:34 shared
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas    697427 Apr 25 07:34 input.tar.gz
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas         0 Apr 25 07:34 boinc_lockfile
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas      2577 Apr 25 07:34 pandaJob.out
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas        57 Apr 25 07:34 setup.sh.local
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas    997219 Apr 25 07:34 agis_schedconf.cvmfs.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas       444 Apr 25 07:34 workernode_map.json
[2026-04-25 14:51:47] drwx------. 5 boincer umatlas      4096 Apr 25 07:34 pilot3
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas      6774 Apr 25 14:48 init_data.xml
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas 189676359 Apr 25 14:48 HITS.49263191._075680.pool.root.1
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas       488 Apr 25 14:48 boinc_task_state.xml
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas      1055 Apr 25 14:50 memory_monitor_summary.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas   1509089 Apr 25 14:50 agis_ddmendpoints.agis.ALL.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas    529720 Apr 25 14:50 log.49263191._075680.job.log.tgz.1
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas      6438 Apr 25 14:50 heartbeat_new.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas      6329 Apr 25 14:50 heartbeat.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas        95 Apr 25 14:51 pilot_heartbeat.json
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas      4824 Apr 25 14:51 pilotlog.txt
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas      8192 Apr 25 14:51 boinc_mmap_file
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas        28 Apr 25 14:51 wrapper_checkpoint.txt
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas   2149885 Apr 25 14:51 log.49263191._075680.job.log.1
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas       357 Apr 25 14:51 output.list
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas       410 Apr 25 14:51 runtime_log
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas   2693120 Apr 25 14:51 result.tar.gz
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas      8977 Apr 25 14:51 runtime_log.err
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas       663 Apr 25 14:51 a55d2080a6a4.diag
[2026-04-25 14:51:47] -rw-r--r--. 1 boincer umatlas     21140 Apr 25 14:51 stderr.txt
[2026-04-25 14:51:47] HITS file was successfully produced:
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas 189676359 Apr 25 14:48 shared/HITS.pool.root.1
[2026-04-25 14:51:47]  *** Contents of shared directory: ***
[2026-04-25 14:51:47] total 405908
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas 222550180 Apr 25 07:34 ATLAS.root_0
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:34 start_atlas.sh
[2026-04-25 14:51:47] -rw-r--r--. 2 boincer umatlas    697427 Apr 25 07:34 input.tar.gz
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas 189676359 Apr 25 14:48 HITS.pool.root.1
[2026-04-25 14:51:47] -rw-------. 1 boincer umatlas   2693120 Apr 25 14:51 result.tar.gz
14:51:48 (3668733): run_atlas exited; CPU time 55520.225530
14:51:48 (3668733): called boinc_finish(0)

</stderr_txt>
]]>

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