Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:34:12 (990108): wrapper (7.7.26015): starting
07:34:12 (990108): wrapper: running run_atlas (--nthreads 9)
[2026-04-25 07:34:12] Arguments: --nthreads 9
[2026-04-25 07:34:12] Threads: 9
[2026-04-25 07:34:12] Checking for CVMFS
[2026-04-25 07:34:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 07:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 07:34:12] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 07:34:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 07:34:13] 2.13.3.0 1513861 114664 335024 158846 1 717 25728712 32935937 27940 16776704 0 454454249 99.599 547684350 30901 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 07:34:13] CVMFS is ok
[2026-04-25 07:34:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 07:34:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 07:34:13] Further information can be found at the LHC@home message board.
[2026-04-25 07:34:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 07:34:13] Checking for apptainer binary...
[2026-04-25 07:34:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 07:34:13] Running /usr/bin/apptainer --version
[2026-04-25 07:34:13] apptainer version 1.4.5-2.el9
[2026-04-25 07:34:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 07:34:14] c6-12-29-4.aglt2.org
[2026-04-25 07:34:14] apptainer works
[2026-04-25 07:34:14] Set ATHENA_PROC_NUMBER=9
[2026-04-25 07:34:14] Set ATHENA_CORE_NUMBER=9
[2026-04-25 07:34:14] Starting ATLAS job with PandaID=7104556787
[2026-04-25 07:34:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:11:38 (2077447): wrapper (7.7.26015): starting
13:11:38 (2077447): wrapper: running run_atlas (--nthreads 11)
[2026-04-25 13:11:38] Arguments: --nthreads 11
[2026-04-25 13:11:38] Threads: 11
[2026-04-25 13:11:38] This job has been restarted, cleaning up previous attempt
[2026-04-25 13:11:38] Checking for CVMFS
[2026-04-25 13:11:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 13:11:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 13:11:39] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 13:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 13:11:39] 2.13.3.0 1513861 115001 327116 158856 1 542 28784185 32935937 22571 16776704 0 455472861 99.600 548269331 30897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 13:11:39] CVMFS is ok
[2026-04-25 13:11:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 13:11:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 13:11:39] Further information can be found at the LHC@home message board.
[2026-04-25 13:11:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 13:11:39] Checking for apptainer binary...
[2026-04-25 13:11:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 13:11:39] Running /usr/bin/apptainer --version
[2026-04-25 13:11:39] apptainer version 1.4.5-2.el9
[2026-04-25 13:11:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 13:11:40] c6-12-29-4.aglt2.org
[2026-04-25 13:11:40] apptainer works
[2026-04-25 13:11:40] Set ATHENA_PROC_NUMBER=11
[2026-04-25 13:11:40] Set ATHENA_CORE_NUMBER=11
[2026-04-25 13:11:40] Starting ATLAS job with PandaID=7104556787
[2026-04-25 13:11:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 17:09:18]  *** The last 200 lines of the pilot log: ***
[2026-04-25 17:09:18] 2026-04-25 21:08:36,470 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-25 17:09:18] 2026-04-25 21:08:36,486 | INFO     | this job has now completed (state=finished)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,486 | INFO     | log transfer has been attempted: DONE
[2026-04-25 17:09:18] 2026-04-25 21:08:36,487 | INFO     | job 7104556787 has finished - writing final server update
[2026-04-25 17:09:18] 2026-04-25 21:08:36,487 | INFO     | total number of processed events: 400 (read)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,586 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7104556787/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,587 | INFO     | extracted standard info from prmon json
[2026-04-25 17:09:18] 2026-04-25 21:08:36,587 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 17:09:18] 2026-04-25 21:08:36,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 17:09:18] 2026-04-25 21:08:36,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 17:09:18] 2026-04-25 21:08:36,595 | INFO     | fitting pss+swap vs Time
[2026-04-25 17:09:18] 2026-04-25 21:08:36,596 | INFO     | sum of square deviations: 3872129456.995693
[2026-04-25 17:09:18] 2026-04-25 21:08:36,598 | INFO     | sum of deviations: 43774162110.24138
[2026-04-25 17:09:18] 2026-04-25 21:08:36,598 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,598 | INFO     | mean y: 2597830.7586206896
[2026-04-25 17:09:18] 2026-04-25 21:08:36,598 | INFO     | intersect: 2597830.7586206896
[2026-04-25 17:09:18] 2026-04-25 21:08:36,599 | INFO     | chi2: 2.58890113276503
[2026-04-25 17:09:18] 2026-04-25 21:08:36,599 | INFO     | sum of square deviations: 3627146318.7400923
[2026-04-25 17:09:18] 2026-04-25 21:08:36,601 | INFO     | sum of deviations: 58928608767.176186
[2026-04-25 17:09:18] 2026-04-25 21:08:36,601 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,601 | INFO     | mean y: 2607086.215859031
[2026-04-25 17:09:18] 2026-04-25 21:08:36,601 | INFO     | intersect: 2607086.215859031
[2026-04-25 17:09:18] 2026-04-25 21:08:36,602 | INFO     | chi2: 1.797853238978017
[2026-04-25 17:09:18] 2026-04-25 21:08:36,602 | INFO     | current chi2=1.797853238978017 (change=30.555353534962855 %)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,602 | INFO     | sum of square deviations: 3392721517.981963
[2026-04-25 17:09:18] 2026-04-25 21:08:36,604 | INFO     | sum of deviations: 57404106620.31532
[2026-04-25 17:09:18] 2026-04-25 21:08:36,604 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,604 | INFO     | mean y: 2606094.3423423423
[2026-04-25 17:09:18] 2026-04-25 21:08:36,604 | INFO     | intersect: 2606094.3423423423
[2026-04-25 17:09:18] 2026-04-25 21:08:36,604 | INFO     | chi2: 1.7981167523121067
[2026-04-25 17:09:18] 2026-04-25 21:08:36,605 | INFO     | current chi2=1.7981167523121067 (change=-0.014657110401256973 %)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,605 | INFO     | right removable region: 221
[2026-04-25 17:09:18] 2026-04-25 21:08:36,605 | INFO     | sum of square deviations: 3627103130.6960406
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | sum of deviations: -1844373027.797348
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | mean y: 2626030.6563876653
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | intersect: 2626030.6563876653
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | chi2: 0.8798014450007362
[2026-04-25 17:09:18] 2026-04-25 21:08:36,607 | INFO     | current chi2=0.8798014450007362 (change=66.01641391917195 %)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,608 | INFO     | sum of square deviations: 3392635141.8378477
[2026-04-25 17:09:18] 2026-04-25 21:08:36,609 | INFO     | sum of deviations: -10518702849.35135
[2026-04-25 17:09:18] 2026-04-25 21:08:36,609 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,610 | INFO     | mean y: 2631627.391891892
[2026-04-25 17:09:18] 2026-04-25 21:08:36,610 | INFO     | intersect: 2631627.391891892
[2026-04-25 17:09:18] 2026-04-25 21:08:36,610 | INFO     | chi2: 0.8144848916383811
[2026-04-25 17:09:18] 2026-04-25 21:08:36,610 | INFO     | current chi2=0.8144848916383811 (change=7.4240106939470225 %)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,610 | INFO     | left removable region: 10
[2026-04-25 17:09:18] 2026-04-25 21:08:36,611 | INFO     | sum of square deviations: 2912914760.5497503
[2026-04-25 17:09:18] 2026-04-25 21:08:36,612 | INFO     | sum of deviations: 4780005673.12322
[2026-04-25 17:09:18] 2026-04-25 21:08:36,612 | INFO     | mean x (centered): 0.0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,612 | INFO     | mean y: 2641830.9810426543
[2026-04-25 17:09:18] 2026-04-25 21:08:36,612 | INFO     | intersect: 2641830.9810426543
[2026-04-25 17:09:18] 2026-04-25 21:08:36,613 | INFO     | chi2: 0.003543824355652326
[2026-04-25 17:09:18] 2026-04-25 21:08:36,613 | INFO     | current memory leak: 1.64 B/s (using 211 data points, chi2=0.00)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | could have reported an average CPU frequency of 2542 MHz (11 samples)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | ..............................
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | . Timing measurements:
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | . get job = 0 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | . initial setup = 3 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | . payload setup = 30 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,614 | INFO     | . stage-in = 0 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,615 | INFO     | . payload execution = 14125 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,615 | INFO     | . stage-out = 8 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,615 | INFO     | . log creation = 1 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,615 | INFO     | ..............................
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | 
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | job summary report
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | --------------------------------------------------
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | PanDA job id: 7104556787
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | task id: 49718416
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | errors: (none)
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 17:09:18] 2026-04-25 21:08:36,891 | INFO     | pilot state: finished 
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | transexitcode: 0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | exeerrorcode: 0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | exeerrordiag: 
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | exitcode: 0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | exitmsg: OK
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | cpuconsumptiontime: 46231 s
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | nevents: 400
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | neventsw: 0
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | pid: 2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | pgrp: 2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | corecount: 11
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | event service: False
[2026-04-25 17:09:18] 2026-04-25 21:08:36,892 | INFO     | sizes: {0: 2273969, 1: 2256605, 2: 2276483, 14161: 2306905, 14162: 2306904, 14172: 2316142, 14175: 2316280}
[2026-04-25 17:09:18] 2026-04-25 21:08:36,893 | INFO     | --------------------------------------------------
[2026-04-25 17:09:18] 2026-04-25 21:08:36,893 | INFO     | 
[2026-04-25 17:09:18] 2026-04-25 21:08:36,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,023 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 17:09:18] 2026-04-25 21:08:37,029 | INFO     | job 7104556787 has completed (purged errors)
[2026-04-25 17:09:18] 2026-04-25 21:08:37,030 | INFO     | overall cleanup function is called
[2026-04-25 17:09:18] 2026-04-25 21:08:38,060 | INFO     | --- collectZombieJob: --- 10, [2103382]
[2026-04-25 17:09:18] 2026-04-25 21:08:38,061 | INFO     | zombie collector waiting for pid 2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:38,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 17:09:18] 2026-04-25 21:08:38,061 | INFO     | collected zombie processes
[2026-04-25 17:09:18] 2026-04-25 21:08:38,061 | INFO     | will attempt to kill all subprocesses of pid=2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:39,437 | INFO     | process IDs to be killed: [2103382] (in reverse order)
[2026-04-25 17:09:18] 2026-04-25 21:08:39,726 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 17:09:18] 2026-04-25 21:08:39,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 17:09:18] 2026-04-25 21:08:39,787 | INFO     | did not find any defunct processes belonging to 2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:39,887 | INFO     | did not find any defunct processes belonging to 2103382
[2026-04-25 17:09:18] 2026-04-25 21:08:39,887 | INFO     | Ready for new job
[2026-04-25 17:09:18] 2026-04-25 21:08:39,889 | INFO     | ***************************************
[2026-04-25 17:09:18] 2026-04-25 21:08:39,889 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 17:09:18] 2026-04-25 21:08:39,889 | INFO     | ***************************************
[2026-04-25 17:09:18] 2026-04-25 21:08:39,889 | INFO     | 
[2026-04-25 17:09:18] 2026-04-25 21:08:39,916 | INFO     | architecture information:
[2026-04-25 17:09:18] 2026-04-25 21:08:39,921 | INFO     | executing command: cat /etc/os-release
[2026-04-25 17:09:18] 2026-04-25 21:08:40,003 | INFO     | cat /etc/os-release:
[2026-04-25 17:09:18] NAME="CentOS Linux"
[2026-04-25 17:09:18] VERSION="7 (Core)"
[2026-04-25 17:09:18] ID="centos"
[2026-04-25 17:09:18] ID_LIKE="rhel fedora"
[2026-04-25 17:09:18] VERSION_ID="7"
[2026-04-25 17:09:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 17:09:18] ANSI_COLOR="0;31"
[2026-04-25 17:09:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 17:09:18] HOME_URL="https://www.centos.org/"
[2026-04-25 17:09:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 17:09:18] 
[2026-04-25 17:09:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 17:09:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 17:09:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 17:09:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 17:09:18] 
[2026-04-25 17:09:18] 2026-04-25 21:08:40,004 | INFO     | ***************************************
[2026-04-25 17:09:18] 2026-04-25 21:08:40,508 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-25 17:09:18] 2026-04-25 21:08:40,609 | INFO     | sufficient remaining disk space (93475307520 B)
[2026-04-25 17:09:18] 2026-04-25 21:08:40,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 17:09:18] 2026-04-25 21:08:40,610 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 17:09:18] 2026-04-25 21:08:40,610 | INFO     | update_server=False
[2026-04-25 17:09:18] 2026-04-25 21:08:40,610 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 17:09:18] 2026-04-25 21:08:40,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 17:09:18] 2026-04-25 21:08:40,611 | INFO     | aborting loop
[2026-04-25 17:09:18] 2026-04-25 21:08:40,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 17:09:18] 2026-04-25 21:08:40,626 | INFO     | all payload control threads have been joined
[2026-04-25 17:09:18] 2026-04-25 21:08:40,668 | INFO     | all data control threads have been joined
[2026-04-25 17:09:18] 2026-04-25 21:08:41,042 | INFO     | all job control threads have been joined
[2026-04-25 17:09:18] 2026-04-25 21:08:41,615 | INFO     | [job] retrieve thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,616 | INFO     | [job] job monitor thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,632 | INFO     | [payload] control thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,676 | INFO     | [data] control thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,677 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,678 | INFO     | [job] validate thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,739 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,760 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 17:09:18] 2026-04-25 21:08:41,773 | INFO     | [data] copytool_in thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,775 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,781 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:41,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 17:09:18] 2026-04-25 21:08:42,048 | INFO     | [job] control thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:42,209 | INFO     | [payload] failed_post thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:42,877 | INFO     | [payload] validate_post thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:42,933 | INFO     | [job] queue monitor thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:43,767 | INFO     | [data] copytool_out thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:44,619 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 17:09:18] 2026-04-25 21:08:46,773 | INFO     | [monitor] cgroup control has ended
[2026-04-25 17:09:18] 2026-04-25 21:08:48,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606548858688)>', '<ExcThread(monitor, started 140605518755584)>']
[2026-04-25 17:09:18] 2026-04-25 21:08:53,357 | INFO     | all workflow threads have been joined
[2026-04-25 17:09:18] 2026-04-25 21:08:53,357 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 17:09:18] 2026-04-25 21:08:53,358 | INFO     | traces error code: 0
[2026-04-25 17:09:18] 2026-04-25 21:08:53,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 17:09:18] 2026-04-25 21:09:11,534 | INFO     | PID=2092807 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 17:09:18] 2026-04-25 21:09:11,546 | INFO     | .. there are 29 such processes running
[2026-04-25 17:09:18] 2026-04-25 21:09:11,553 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 17:09:18] 2026-04-25 21:09:11,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 17:09:18] 2026-04-25 21:09:11,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 17:09:18] 2026-04-25 21:09:11,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 17:09:18] 2026-04-25 21:09:11,554 | INFO     | [monitor] control thread has ended
[2026-04-25 17:09:18] 2026-04-25 21:09:12,679 [wrapper] ==== pilot stdout END ====
[2026-04-25 17:09:18] 2026-04-25 21:09:12,704 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 17:09:18] 2026-04-25 21:09:12,734 [wrapper] pilotpid: 2092807
[2026-04-25 17:09:18] 2026-04-25 21:09:12,769 [wrapper] Pilot exit status: 0
[2026-04-25 17:09:18] 2026-04-25 21:09:12,981 [wrapper] pandaids: 7104556787 7104556787
[2026-04-25 17:09:18] 2026-04-25 21:09:13,636 [wrapper] cleanup supervisor_pilot 2761319 2092808
[2026-04-25 17:09:18] 2026-04-25 21:09:13,670 [wrapper] Test setup, not cleaning
[2026-04-25 17:09:18] 2026-04-25 21:09:13,688 [wrapper] apfmon messages muted
[2026-04-25 17:09:18] 2026-04-25 21:09:13,708 [wrapper] ==== wrapper stdout END ====
[2026-04-25 17:09:18] 2026-04-25 21:09:13,728 [wrapper] ==== wrapper stderr END ====
[2026-04-25 17:09:18]  *** Error codes and diagnostics ***
[2026-04-25 17:09:18]     "exeErrorCode": 0,
[2026-04-25 17:09:18]     "pilotErrorCode": 0,
[2026-04-25 17:09:18]  *** Listing of results directory ***
[2026-04-25 17:09:18] total 1051064
[2026-04-25 17:09:18] drwx------. 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 06:46 pilot3.tar.gz
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 07:27 queuedata.json
[2026-04-25 17:09:18] -rwx------. 1 boincer umatlas     36322 Apr 25 07:27 runpilot2-wrapper.sh
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas       100 Apr 25 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 17:09:18] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 07:34 run_atlas
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas       105 Apr 25 07:34 job.xml
[2026-04-25 17:09:18] -rw-r--r--. 3 boincer umatlas 441195142 Apr 25 07:34 EVNT.46373187._000008.pool.root.1
[2026-04-25 17:09:18] -rw-r--r--. 3 boincer umatlas 441195142 Apr 25 07:34 ATLAS.root_0
[2026-04-25 17:09:18] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:34 start_atlas.sh
[2026-04-25 17:09:18] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 07:34 shared
[2026-04-25 17:09:18] -rw-r--r--. 2 boincer umatlas    697432 Apr 25 07:34 input.tar.gz
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas         0 Apr 25 07:34 boinc_lockfile
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas      2594 Apr 25 13:11 pandaJob.out
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas        57 Apr 25 13:11 setup.sh.local
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas    997235 Apr 25 13:12 agis_schedconf.cvmfs.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas       443 Apr 25 13:12 workernode_map.json
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas      6794 Apr 25 17:02 init_data.xml
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas 186519264 Apr 25 17:07 HITS.49718416._011594.pool.root.1
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas       489 Apr 25 17:07 boinc_task_state.xml
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas      1052 Apr 25 17:08 memory_monitor_summary.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas   1509089 Apr 25 17:08 agis_ddmendpoints.agis.ALL.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas    474219 Apr 25 17:08 log.49718416._011594.job.log.tgz.1
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas      6434 Apr 25 17:08 heartbeat_new.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas      6325 Apr 25 17:08 heartbeat.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas        96 Apr 25 17:09 pilot_heartbeat.json
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas       823 Apr 25 17:09 pilotlog.txt
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas        28 Apr 25 17:09 wrapper_checkpoint.txt
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas   1147738 Apr 25 17:09 log.49718416._011594.job.log.1
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas       357 Apr 25 17:09 output.list
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas       410 Apr 25 17:09 runtime_log
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas   1638400 Apr 25 17:09 result.tar.gz
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas      9062 Apr 25 17:09 runtime_log.err
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas       785 Apr 25 17:09 a53aea135a4d.diag
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas      8192 Apr 25 17:09 boinc_mmap_file
[2026-04-25 17:09:18] -rw-r--r--. 1 boincer umatlas     23236 Apr 25 17:09 stderr.txt
[2026-04-25 17:09:18] HITS file was successfully produced:
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas 186519264 Apr 25 17:07 shared/HITS.pool.root.1
[2026-04-25 17:09:18]  *** Contents of shared directory: ***
[2026-04-25 17:09:18] total 615312
[2026-04-25 17:09:18] -rw-r--r--. 3 boincer umatlas 441195142 Apr 25 07:34 ATLAS.root_0
[2026-04-25 17:09:18] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:34 start_atlas.sh
[2026-04-25 17:09:18] -rw-r--r--. 2 boincer umatlas    697432 Apr 25 07:34 input.tar.gz
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas 186519264 Apr 25 17:07 HITS.pool.root.1
[2026-04-25 17:09:18] -rw-------. 1 boincer umatlas   1638400 Apr 25 17:09 result.tar.gz
17:09:41 (2077447): run_atlas exited; CPU time 46890.457604
17:09:41 (2077447): called boinc_finish(0)

</stderr_txt>
]]>

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