Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:33:19 (916625): wrapper (7.7.26015): starting
07:33:19 (916625): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 07:33:19] Arguments: --nthreads 8
[2026-04-25 07:33:19] Threads: 8
[2026-04-25 07:33:19] Checking for CVMFS
[2026-04-25 07:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 07:33:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 07:33:21] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 07:33:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 07:33:21] 2.13.3.0 7109 245972 743208 158846 1 579 15648427 21042177 13984 16776704 0 845144754 99.409 1244072871 30280 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 07:33:21] CVMFS is ok
[2026-04-25 07:33:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 07:33:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 07:33:21] Further information can be found at the LHC@home message board.
[2026-04-25 07:33:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 07:33:21] Checking for apptainer binary...
[2026-04-25 07:33:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 07:33:21] Running /usr/bin/apptainer --version
[2026-04-25 07:33:21] apptainer version 1.4.5-2.el9
[2026-04-25 07:33:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 07:33:22] c-16-11.aglt2.org
[2026-04-25 07:33:22] apptainer works
[2026-04-25 07:33:22] Set ATHENA_PROC_NUMBER=8
[2026-04-25 07:33:22] Set ATHENA_CORE_NUMBER=8
[2026-04-25 07:33:22] Starting ATLAS job with PandaID=7104563385
[2026-04-25 07:33:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:40:08 (916625): BOINC client no longer exists - exiting
09:40:08 (916625): timer handler: client dead, exiting
09:45:48 (1758505): wrapper (7.7.26015): starting
09:45:48 (1758505): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 09:45:49] Arguments: --nthreads 8
[2026-04-25 09:45:49] Threads: 8
[2026-04-25 09:45:49] This job has been restarted, cleaning up previous attempt
[2026-04-25 09:45:49] Checking for CVMFS
[2026-04-25 09:45:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 09:45:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 09:45:50] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 09:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 09:45:51] 2.13.3.0 7109 246105 737004 158850 1 370 18933112 21042176 16553 16776704 0 845853604 99.409 1245091027 30280 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 09:45:51] CVMFS is ok
[2026-04-25 09:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 09:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 09:45:51] Further information can be found at the LHC@home message board.
[2026-04-25 09:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 09:45:51] Checking for apptainer binary...
[2026-04-25 09:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 09:45:51] Running /usr/bin/apptainer --version
[2026-04-25 09:45:51] apptainer version 1.4.5-2.el9
[2026-04-25 09:45:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 09:45:52] c-16-11.aglt2.org
[2026-04-25 09:45:52] apptainer works
[2026-04-25 09:45:52] Set ATHENA_PROC_NUMBER=8
[2026-04-25 09:45:52] Set ATHENA_CORE_NUMBER=8
[2026-04-25 09:45:52] Starting ATLAS job with PandaID=7104563385
[2026-04-25 09:45:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 00:56:31]  *** The last 200 lines of the pilot log: ***
[2026-04-26 00:56:31] 2026-04-26 04:55:35,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-26 00:56:31] 2026-04-26 04:55:35,384 | INFO     | log transfer has been attempted: DONE
[2026-04-26 00:56:31] 2026-04-26 04:55:35,385 | INFO     | job 7104563385 has finished - writing final server update
[2026-04-26 00:56:31] 2026-04-26 04:55:35,385 | INFO     | total number of processed events: 400 (read)
[2026-04-26 00:56:31] 2026-04-26 04:55:35,483 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7104563385/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 00:56:31] 2026-04-26 04:55:35,484 | INFO     | extracted standard info from prmon json
[2026-04-26 00:56:31] 2026-04-26 04:55:35,485 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 00:56:31] 2026-04-26 04:55:35,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 00:56:31] 2026-04-26 04:55:35,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 00:56:31] 2026-04-26 04:55:35,783 | INFO     | fitting pss+swap vs Time
[2026-04-26 00:56:31] 2026-04-26 04:55:35,814 | INFO     | sum of square deviations: 220072556332.88806
[2026-04-26 00:56:31] 2026-04-26 04:55:36,089 | INFO     | sum of deviations: 198589054902.12955
[2026-04-26 00:56:31] 2026-04-26 04:55:36,090 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:36,090 | INFO     | mean y: 2507866.9630044843
[2026-04-26 00:56:31] 2026-04-26 04:55:36,090 | INFO     | intersect: 2507866.9630044843
[2026-04-26 00:56:31] 2026-04-26 04:55:36,091 | INFO     | chi2: 5.900217072880085
[2026-04-26 00:56:31] 2026-04-26 04:55:36,125 | INFO     | sum of square deviations: 216392700522.97174
[2026-04-26 00:56:31] 2026-04-26 04:55:36,338 | INFO     | sum of deviations: 430298453682.534
[2026-04-26 00:56:31] 2026-04-26 04:55:36,338 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:36,339 | INFO     | mean y: 2517458.3066516346
[2026-04-26 00:56:31] 2026-04-26 04:55:36,339 | INFO     | intersect: 2517458.3066516346
[2026-04-26 00:56:31] 2026-04-26 04:55:36,366 | INFO     | chi2: 2.9837705091472926
[2026-04-26 00:56:31] 2026-04-26 04:55:36,367 | INFO     | current chi2=2.9837705091472926 (change=49.429479080321045 %)
[2026-04-26 00:56:31] 2026-04-26 04:55:36,368 | INFO     | sum of square deviations: 212754047194.49896
[2026-04-26 00:56:31] 2026-04-26 04:55:36,461 | INFO     | monitor loop #2574: job 0:7104563385 is in state 'finished'
[2026-04-26 00:56:31] 2026-04-26 04:55:36,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 00:56:31] 2026-04-26 04:55:36,561 | INFO     | sum of deviations: 427561797332.11194
[2026-04-26 00:56:31] 2026-04-26 04:55:36,599 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:36,599 | INFO     | mean y: 2517343.611111111
[2026-04-26 00:56:31] 2026-04-26 04:55:36,600 | INFO     | intersect: 2517343.611111111
[2026-04-26 00:56:31] 2026-04-26 04:55:36,601 | INFO     | chi2: 2.983742386829347
[2026-04-26 00:56:31] 2026-04-26 04:55:36,601 | INFO     | current chi2=2.983742386829347 (change=0.0009425094141541031 %)
[2026-04-26 00:56:31] 2026-04-26 04:55:36,602 | INFO     | right removable region: 881
[2026-04-26 00:56:31] 2026-04-26 04:55:36,646 | INFO     | sum of square deviations: 216392162502.97186
[2026-04-26 00:56:31] 2026-04-26 04:55:36,869 | INFO     | sum of deviations: -40282320164.08339
[2026-04-26 00:56:31] 2026-04-26 04:55:36,869 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:36,870 | INFO     | mean y: 2517753.3833145434
[2026-04-26 00:56:31] 2026-04-26 04:55:36,870 | INFO     | intersect: 2517753.3833145434
[2026-04-26 00:56:31] 2026-04-26 04:55:36,899 | INFO     | chi2: 3.079902895517698
[2026-04-26 00:56:31] 2026-04-26 04:55:36,900 | INFO     | current chi2=3.079902895517698 (change=47.80017654478772 %)
[2026-04-26 00:56:31] 2026-04-26 04:55:36,901 | INFO     | sum of square deviations: 212753133354.49545
[2026-04-26 00:56:31] 2026-04-26 04:55:37,164 | INFO     | sum of deviations: -83204411252.6406
[2026-04-26 00:56:31] 2026-04-26 04:55:37,164 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,164 | INFO     | mean y: 2519549.4297052156
[2026-04-26 00:56:31] 2026-04-26 04:55:37,165 | INFO     | intersect: 2519549.4297052156
[2026-04-26 00:56:31] 2026-04-26 04:55:37,218 | INFO     | chi2: 2.985844716991536
[2026-04-26 00:56:31] 2026-04-26 04:55:37,219 | INFO     | current chi2=2.985844716991536 (change=3.0539332477997387 %)
[2026-04-26 00:56:31] 2026-04-26 04:55:37,219 | INFO     | left removable region: 10
[2026-04-26 00:56:31] 2026-04-26 04:55:37,220 | INFO     | sum of square deviations: 204892237285.92706
[2026-04-26 00:56:31] 2026-04-26 04:55:37,416 | INFO     | sum of deviations: 146131747834.53403
[2026-04-26 00:56:31] 2026-04-26 04:55:37,416 | INFO     | mean x (centered): 0.0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,416 | INFO     | mean y: 2529258.8082663603
[2026-04-26 00:56:31] 2026-04-26 04:55:37,417 | INFO     | intersect: 2529258.8082663603
[2026-04-26 00:56:31] 2026-04-26 04:55:37,418 | INFO     | chi2: 0.0356085167124201
[2026-04-26 00:56:31] 2026-04-26 04:55:37,418 | INFO     | current memory leak: 0.71 B/s (using 871 data points, chi2=0.04)
[2026-04-26 00:56:31] 2026-04-26 04:55:37,441 | INFO     | could have reported an average CPU frequency of 2900 MHz (34 samples)
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | ..............................
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | . Timing measurements:
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | . get job = 1 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | . initial setup = 4 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | . payload setup = 77 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,442 | INFO     | . stage-in = 0 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,443 | INFO     | . payload execution = 54416 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,443 | INFO     | . stage-out = 7 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,443 | INFO     | . log creation = 1 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,443 | INFO     | ..............................
[2026-04-26 00:56:31] 2026-04-26 04:55:37,978 | INFO     | 
[2026-04-26 00:56:31] 2026-04-26 04:55:37,978 | INFO     | job summary report
[2026-04-26 00:56:31] 2026-04-26 04:55:37,978 | INFO     | --------------------------------------------------
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | PanDA job id: 7104563385
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | task id: 49718416
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | errors: (none)
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | pilot state: finished 
[2026-04-26 00:56:31] 2026-04-26 04:55:37,979 | INFO     | transexitcode: 0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | exeerrorcode: 0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | exeerrordiag: 
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | exitcode: 0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | exitmsg: OK
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | cpuconsumptiontime: 78760 s
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | nevents: 400
[2026-04-26 00:56:31] 2026-04-26 04:55:37,980 | INFO     | neventsw: 0
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | pid: 1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | pgrp: 1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | corecount: 8
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | event service: False
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | sizes: {0: 2273967, 1: 2274652, 3: 2274652, 4: 2276509, 5: 2276509, 54495: 2324380, 54505: 2333378, 54508: 2333434, 54512: 2333628}
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | --------------------------------------------------
[2026-04-26 00:56:31] 2026-04-26 04:55:37,981 | INFO     | 
[2026-04-26 00:56:31] 2026-04-26 04:55:38,079 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-26 00:56:31] 2026-04-26 04:55:38,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,947 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 00:56:31] 2026-04-26 04:55:38,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,947 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 00:56:31] 2026-04-26 04:55:38,948 | INFO     | job 7104563385 has completed (purged errors)
[2026-04-26 00:56:31] 2026-04-26 04:55:38,948 | INFO     | overall cleanup function is called
[2026-04-26 00:56:31] 2026-04-26 04:55:39,959 | INFO     | --- collectZombieJob: --- 10, [1801696]
[2026-04-26 00:56:31] 2026-04-26 04:55:39,959 | INFO     | zombie collector waiting for pid 1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:39,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 00:56:31] 2026-04-26 04:55:39,960 | INFO     | collected zombie processes
[2026-04-26 00:56:31] 2026-04-26 04:55:39,960 | INFO     | will attempt to kill all subprocesses of pid=1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:43,253 | INFO     | process IDs to be killed: [1801696] (in reverse order)
[2026-04-26 00:56:31] 2026-04-26 04:55:44,235 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 00:56:31] 2026-04-26 04:55:44,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 00:56:31] 2026-04-26 04:55:44,266 | INFO     | did not find any defunct processes belonging to 1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:44,294 | INFO     | did not find any defunct processes belonging to 1801696
[2026-04-26 00:56:31] 2026-04-26 04:55:44,316 | INFO     | Ready for new job
[2026-04-26 00:56:31] 2026-04-26 04:55:44,319 | INFO     | ***************************************
[2026-04-26 00:56:31] 2026-04-26 04:55:44,319 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 00:56:31] 2026-04-26 04:55:44,320 | INFO     | ***************************************
[2026-04-26 00:56:31] 2026-04-26 04:55:44,399 | INFO     | 
[2026-04-26 00:56:31] 2026-04-26 04:55:44,402 | INFO     | architecture information:
[2026-04-26 00:56:31] 2026-04-26 04:55:44,439 | INFO     | executing command: cat /etc/os-release
[2026-04-26 00:56:31] 2026-04-26 04:55:44,617 | INFO     | cat /etc/os-release:
[2026-04-26 00:56:31] NAME="CentOS Linux"
[2026-04-26 00:56:31] VERSION="7 (Core)"
[2026-04-26 00:56:31] ID="centos"
[2026-04-26 00:56:31] ID_LIKE="rhel fedora"
[2026-04-26 00:56:31] VERSION_ID="7"
[2026-04-26 00:56:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 00:56:31] ANSI_COLOR="0;31"
[2026-04-26 00:56:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 00:56:31] HOME_URL="https://www.centos.org/"
[2026-04-26 00:56:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 00:56:31] 
[2026-04-26 00:56:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 00:56:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 00:56:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 00:56:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 00:56:31] 
[2026-04-26 00:56:31] 2026-04-26 04:55:44,618 | INFO     | ***************************************
[2026-04-26 00:56:31] 2026-04-26 04:55:45,168 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-26 00:56:31] 2026-04-26 04:55:45,428 | INFO     | sufficient remaining disk space (51831111680 B)
[2026-04-26 00:56:31] 2026-04-26 04:55:45,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 00:56:31] 2026-04-26 04:55:45,428 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 00:56:31] 2026-04-26 04:55:45,429 | INFO     | update_server=False
[2026-04-26 00:56:31] 2026-04-26 04:55:45,429 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 00:56:31] 2026-04-26 04:55:45,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 00:56:31] 2026-04-26 04:55:45,449 | INFO     | aborting loop
[2026-04-26 00:56:31] 2026-04-26 04:55:45,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 00:56:31] 2026-04-26 04:55:45,527 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 00:56:31] 2026-04-26 04:55:45,596 | INFO     | all payload control threads have been joined
[2026-04-26 00:56:31] 2026-04-26 04:55:45,605 | INFO     | all data control threads have been joined
[2026-04-26 00:56:31] 2026-04-26 04:55:45,653 | INFO     | [monitor] cgroup control has ended
[2026-04-26 00:56:31] 2026-04-26 04:55:46,030 | INFO     | all job control threads have been joined
[2026-04-26 00:56:31] 2026-04-26 04:55:46,435 | INFO     | [job] retrieve thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,472 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,473 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,473 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,474 | INFO     | [job] job monitor thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,507 | INFO     | [data] copytool_in thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,520 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,604 | INFO     | [payload] control thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:46,615 | INFO     | [data] control thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:47,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 00:56:31] 2026-04-26 04:55:47,036 | INFO     | [job] control thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:47,444 | INFO     | [job] validate thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:47,466 | INFO     | [data] copytool_out thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:47,913 | INFO     | [payload] failed_post thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:47,994 | INFO     | [payload] validate_post thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:48,036 | INFO     | [job] queue monitor thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:49,536 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 00:56:31] 2026-04-26 04:55:51,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687271728960)>', '<ExcThread(monitor, started 140686787589888)>']
[2026-04-26 00:56:31] 2026-04-26 04:55:56,182 | INFO     | all workflow threads have been joined
[2026-04-26 00:56:31] 2026-04-26 04:55:56,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 00:56:31] 2026-04-26 04:55:56,183 | INFO     | traces error code: 0
[2026-04-26 00:56:31] 2026-04-26 04:55:56,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 00:56:31] 2026-04-26 04:56:27,579 | INFO     | PID=1776437 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-26 00:56:31] 2026-04-26 04:56:27,580 | INFO     | .. there are 26 such processes running
[2026-04-26 00:56:31] 2026-04-26 04:56:27,686 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 00:56:31] 2026-04-26 04:56:27,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 00:56:31] 2026-04-26 04:56:27,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 00:56:31] 2026-04-26 04:56:27,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 00:56:31] 2026-04-26 04:56:27,687 | INFO     | [monitor] control thread has ended
[2026-04-26 00:56:31] 2026-04-26 04:56:29,615 [wrapper] ==== pilot stdout END ====
[2026-04-26 00:56:31] 2026-04-26 04:56:29,624 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 00:56:31] 2026-04-26 04:56:29,627 [wrapper] pilotpid: 1776437
[2026-04-26 00:56:31] 2026-04-26 04:56:29,631 [wrapper] Pilot exit status: 0
[2026-04-26 00:56:31] 2026-04-26 04:56:29,653 [wrapper] pandaids: 7104563385 7104563385
[2026-04-26 00:56:31] 2026-04-26 04:56:29,842 [wrapper] cleanup supervisor_pilot 1333223 1776438
[2026-04-26 00:56:31] 2026-04-26 04:56:29,873 [wrapper] Test setup, not cleaning
[2026-04-26 00:56:31] 2026-04-26 04:56:29,907 [wrapper] apfmon messages muted
[2026-04-26 00:56:31] 2026-04-26 04:56:29,911 [wrapper] ==== wrapper stdout END ====
[2026-04-26 00:56:31] 2026-04-26 04:56:29,914 [wrapper] ==== wrapper stderr END ====
[2026-04-26 00:56:31]  *** Error codes and diagnostics ***
[2026-04-26 00:56:31]     "exeErrorCode": 0,
[2026-04-26 00:56:31]     "pilotErrorCode": 0,
[2026-04-26 00:56:31]  *** Listing of results directory ***
[2026-04-26 00:56:31] total 1053672
[2026-04-26 00:56:31] drwx------. 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 06:46 pilot3.tar.gz
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 07:27 queuedata.json
[2026-04-26 00:56:31] -rwx------. 1 boincer umatlas     36322 Apr 25 07:27 runpilot2-wrapper.sh
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas       100 Apr 25 07:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 00:56:31] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 07:33 run_atlas
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas       105 Apr 25 07:33 job.xml
[2026-04-26 00:56:31] -rw-r--r--. 3 boincer umatlas 441312931 Apr 25 07:33 EVNT.46373187._000004.pool.root.1
[2026-04-26 00:56:31] -rw-r--r--. 3 boincer umatlas 441312931 Apr 25 07:33 ATLAS.root_0
[2026-04-26 00:56:31] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:33 start_atlas.sh
[2026-04-26 00:56:31] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 07:33 shared
[2026-04-26 00:56:31] -rw-r--r--. 2 boincer umatlas    697426 Apr 25 07:33 input.tar.gz
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas         0 Apr 25 07:33 boinc_lockfile
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas      2593 Apr 25 09:45 pandaJob.out
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas        57 Apr 25 09:45 setup.sh.local
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas    997243 Apr 25 09:46 agis_schedconf.cvmfs.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas       441 Apr 25 09:46 workernode_map.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas 183425689 Apr 26 00:50 HITS.49718416._011625.pool.root.1
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas       489 Apr 26 00:50 boinc_task_state.xml
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas      6438 Apr 26 00:54 init_data.xml
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas      1041 Apr 26 00:55 memory_monitor_summary.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas   1509089 Apr 26 00:55 agis_ddmendpoints.agis.ALL.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas    715911 Apr 26 00:55 log.49718416._011625.job.log.tgz.1
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas      6404 Apr 26 00:55 heartbeat_new.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas      6295 Apr 26 00:55 heartbeat.json
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas        28 Apr 26 00:56 wrapper_checkpoint.txt
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas        96 Apr 26 00:56 pilot_heartbeat.json
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas       823 Apr 26 00:56 pilotlog.txt
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas   3666614 Apr 26 00:56 log.49718416._011625.job.log.1
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas       357 Apr 26 00:56 output.list
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas      8192 Apr 26 00:56 boinc_mmap_file
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas       410 Apr 26 00:56 runtime_log
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas   4403200 Apr 26 00:56 result.tar.gz
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas      9045 Apr 26 00:56 runtime_log.err
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas       783 Apr 26 00:56 a53ac5d39c16.diag
[2026-04-26 00:56:31] -rw-r--r--. 1 boincer umatlas     23376 Apr 26 00:56 stderr.txt
[2026-04-26 00:56:31] HITS file was successfully produced:
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas 183425689 Apr 26 00:50 shared/HITS.pool.root.1
[2026-04-26 00:56:31]  *** Contents of shared directory: ***
[2026-04-26 00:56:31] total 615108
[2026-04-26 00:56:31] -rw-r--r--. 3 boincer umatlas 441312931 Apr 25 07:33 ATLAS.root_0
[2026-04-26 00:56:31] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:33 start_atlas.sh
[2026-04-26 00:56:31] -rw-r--r--. 2 boincer umatlas    697426 Apr 25 07:33 input.tar.gz
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas 183425689 Apr 26 00:50 HITS.pool.root.1
[2026-04-26 00:56:31] -rw-------. 1 boincer umatlas   4403200 Apr 26 00:56 result.tar.gz
00:56:53 (1758505): run_atlas exited; CPU time 80948.136620
00:56:53 (1758505): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN