Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:32:13 (879334): wrapper (7.7.26015): starting
07:32:13 (879334): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 07:32:13] Arguments: --nthreads 8
[2026-04-25 07:32:13] Threads: 8
[2026-04-25 07:32:13] Checking for CVMFS
[2026-04-25 07:32:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 07:32:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 07:32:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 07:32:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 07:32:14] 2.13.3.0 7109 245971 744484 158846 2 579 15623186 21042177 12950 16776704 0 845079408 99.409 1244064537 30280 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 07:32:14] CVMFS is ok
[2026-04-25 07:32:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 07:32:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 07:32:14] Further information can be found at the LHC@home message board.
[2026-04-25 07:32:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 07:32:14] Checking for apptainer binary...
[2026-04-25 07:32:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 07:32:14] Running /usr/bin/apptainer --version
[2026-04-25 07:32:14] apptainer version 1.4.5-2.el9
[2026-04-25 07:32:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 07:32:15] c-16-11.aglt2.org
[2026-04-25 07:32:15] apptainer works
[2026-04-25 07:32:15] Set ATHENA_PROC_NUMBER=8
[2026-04-25 07:32:15] Set ATHENA_CORE_NUMBER=8
[2026-04-25 07:32:15] Starting ATLAS job with PandaID=7104192972
[2026-04-25 07:32:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:45:48 (1758504): wrapper (7.7.26015): starting
09:45:48 (1758504): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 09:45:49] Arguments: --nthreads 8
[2026-04-25 09:45:49] Threads: 8
[2026-04-25 09:45:49] This job has been restarted, cleaning up previous attempt
[2026-04-25 09:45:49] Checking for CVMFS
[2026-04-25 09:45:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 09:45:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 09:45:50] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 09:45:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 09:45:51] 2.13.3.0 7109 246105 737004 158850 1 370 18933112 21042176 16553 16776704 0 845853604 99.409 1245091027 30280 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-25 09:45:51] CVMFS is ok
[2026-04-25 09:45:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 09:45:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 09:45:51] Further information can be found at the LHC@home message board.
[2026-04-25 09:45:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 09:45:51] Checking for apptainer binary...
[2026-04-25 09:45:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 09:45:51] Running /usr/bin/apptainer --version
[2026-04-25 09:45:52] apptainer version 1.4.5-2.el9
[2026-04-25 09:45:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 09:45:53] c-16-11.aglt2.org
[2026-04-25 09:45:53] apptainer works
[2026-04-25 09:45:53] Set ATHENA_PROC_NUMBER=8
[2026-04-25 09:45:53] Set ATHENA_CORE_NUMBER=8
[2026-04-25 09:45:53] Starting ATLAS job with PandaID=7104192972
[2026-04-25 09:45:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-26 02:54:11]  *** The last 200 lines of the pilot log: ***
[2026-04-26 02:54:11] 2026-04-26 06:53:20,298 | INFO     | job 7104192972 has finished - writing final server update
[2026-04-26 02:54:11] 2026-04-26 06:53:20,298 | INFO     | total number of processed events: 400 (read)
[2026-04-26 02:54:11] 2026-04-26 06:53:20,316 | INFO     | monitor loop #2918: job 0:7104192972 is in state 'finished'
[2026-04-26 02:54:11] 2026-04-26 06:53:20,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-26 02:54:11] 2026-04-26 06:53:20,328 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7104192972/memory_monitor_summary.json (trf name=prmon)
[2026-04-26 02:54:11] 2026-04-26 06:53:20,360 | INFO     | extracted standard info from prmon json
[2026-04-26 02:54:11] 2026-04-26 06:53:20,360 | INFO     | extracted standard memory fields from prmon json
[2026-04-26 02:54:11] 2026-04-26 06:53:20,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-26 02:54:11] 2026-04-26 06:53:20,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-26 02:54:11] 2026-04-26 06:53:20,491 | INFO     | fitting pss+swap vs Time
[2026-04-26 02:54:11] 2026-04-26 06:53:20,497 | INFO     | sum of square deviations: 317578756677.1667
[2026-04-26 02:54:11] 2026-04-26 06:53:20,591 | INFO     | sum of deviations: 444547995719.04224
[2026-04-26 02:54:11] 2026-04-26 06:53:20,592 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:20,592 | INFO     | mean y: 2519404.5416666665
[2026-04-26 02:54:11] 2026-04-26 06:53:20,592 | INFO     | intersect: 2519404.5416666665
[2026-04-26 02:54:11] 2026-04-26 06:53:20,598 | INFO     | chi2: 4.3821633401764695
[2026-04-26 02:54:11] 2026-04-26 06:53:20,600 | INFO     | sum of square deviations: 312876526836.27936
[2026-04-26 02:54:11] 2026-04-26 06:53:20,779 | INFO     | sum of deviations: 576437646759.6864
[2026-04-26 02:54:11] 2026-04-26 06:53:20,784 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:20,784 | INFO     | mean y: 2523668.8444666
[2026-04-26 02:54:11] 2026-04-26 06:53:20,785 | INFO     | intersect: 2523668.8444666
[2026-04-26 02:54:11] 2026-04-26 06:53:20,786 | INFO     | chi2: 2.873758373082859
[2026-04-26 02:54:11] 2026-04-26 06:53:20,791 | INFO     | current chi2=2.873758373082859 (change=34.421468347933995 %)
[2026-04-26 02:54:11] 2026-04-26 06:53:20,793 | INFO     | sum of square deviations: 308220949032.83435
[2026-04-26 02:54:11] 2026-04-26 06:53:20,886 | INFO     | sum of deviations: 572363103022.5891
[2026-04-26 02:54:11] 2026-04-26 06:53:20,887 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:20,887 | INFO     | mean y: 2523535.3807615233
[2026-04-26 02:54:11] 2026-04-26 06:53:20,887 | INFO     | intersect: 2523535.3807615233
[2026-04-26 02:54:11] 2026-04-26 06:53:20,893 | INFO     | chi2: 2.8737099975497675
[2026-04-26 02:54:11] 2026-04-26 06:53:20,893 | INFO     | current chi2=2.8737099975497675 (change=0.0016833542285408917 %)
[2026-04-26 02:54:11] 2026-04-26 06:53:20,893 | INFO     | right removable region: 997
[2026-04-26 02:54:11] 2026-04-26 06:53:20,895 | INFO     | sum of square deviations: 312875861326.27905
[2026-04-26 02:54:11] 2026-04-26 06:53:21,066 | INFO     | sum of deviations: 178592738102.72205
[2026-04-26 02:54:11] 2026-04-26 06:53:21,071 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,071 | INFO     | mean y: 2528019.8554336987
[2026-04-26 02:54:11] 2026-04-26 06:53:21,071 | INFO     | intersect: 2528019.8554336987
[2026-04-26 02:54:11] 2026-04-26 06:53:21,073 | INFO     | chi2: 1.6714557738328137
[2026-04-26 02:54:11] 2026-04-26 06:53:21,074 | INFO     | current chi2=1.6714557738328137 (change=61.857748237985476 %)
[2026-04-26 02:54:11] 2026-04-26 06:53:21,080 | INFO     | sum of square deviations: 308219678953.0188
[2026-04-26 02:54:11] 2026-04-26 06:53:21,201 | INFO     | sum of deviations: 126558554516.02316
[2026-04-26 02:54:11] 2026-04-26 06:53:21,201 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,202 | INFO     | mean y: 2529721.874749499
[2026-04-26 02:54:11] 2026-04-26 06:53:21,202 | INFO     | intersect: 2529721.874749499
[2026-04-26 02:54:11] 2026-04-26 06:53:21,204 | INFO     | chi2: 1.569247598956042
[2026-04-26 02:54:11] 2026-04-26 06:53:21,208 | INFO     | current chi2=1.569247598956042 (change=6.114919489757024 %)
[2026-04-26 02:54:11] 2026-04-26 06:53:21,208 | INFO     | left removable region: 10
[2026-04-26 02:54:11] 2026-04-26 06:53:21,210 | INFO     | sum of square deviations: 298140476218.25134
[2026-04-26 02:54:11] 2026-04-26 06:53:21,324 | INFO     | sum of deviations: 255765174568.06573
[2026-04-26 02:54:11] 2026-04-26 06:53:21,325 | INFO     | mean x (centered): 0.0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,325 | INFO     | mean y: 2533982.4265450863
[2026-04-26 02:54:11] 2026-04-26 06:53:21,325 | INFO     | intersect: 2533982.4265450863
[2026-04-26 02:54:11] 2026-04-26 06:53:21,347 | INFO     | chi2: 0.04582506606310384
[2026-04-26 02:54:11] 2026-04-26 06:53:21,348 | INFO     | current memory leak: 0.86 B/s (using 987 data points, chi2=0.05)
[2026-04-26 02:54:11] 2026-04-26 06:53:21,349 | INFO     | could have reported an average CPU frequency of 2900 MHz (38 samples)
[2026-04-26 02:54:11] 2026-04-26 06:53:21,349 | INFO     | ..............................
[2026-04-26 02:54:11] 2026-04-26 06:53:21,349 | INFO     | . Timing measurements:
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . get job = 0 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . initial setup = 3 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . payload setup = 73 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . stage-in = 0 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . payload execution = 61471 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,350 | INFO     | . stage-out = 7 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,351 | INFO     | . log creation = 2 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,359 | INFO     | ..............................
[2026-04-26 02:54:11] 2026-04-26 06:53:21,958 | INFO     | 
[2026-04-26 02:54:11] 2026-04-26 06:53:21,958 | INFO     | job summary report
[2026-04-26 02:54:11] 2026-04-26 06:53:21,958 | INFO     | --------------------------------------------------
[2026-04-26 02:54:11] 2026-04-26 06:53:21,959 | INFO     | PanDA job id: 7104192972
[2026-04-26 02:54:11] 2026-04-26 06:53:21,959 | INFO     | task id: 49645815
[2026-04-26 02:54:11] 2026-04-26 06:53:21,959 | INFO     | errors: (none)
[2026-04-26 02:54:11] 2026-04-26 06:53:21,959 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-26 02:54:11] 2026-04-26 06:53:21,959 | INFO     | pilot state: finished 
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | transexitcode: 0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | exeerrorcode: 0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | exeerrordiag: 
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | exitcode: 0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | exitmsg: OK
[2026-04-26 02:54:11] 2026-04-26 06:53:21,960 | INFO     | cpuconsumptiontime: 105095 s
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | nevents: 400
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | neventsw: 0
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | pid: 1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | pgrp: 1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | corecount: 8
[2026-04-26 02:54:11] 2026-04-26 06:53:21,961 | INFO     | event service: False
[2026-04-26 02:54:11] 2026-04-26 06:53:21,962 | INFO     | sizes: {0: 2274049, 1: 2274650, 2: 2274734, 3: 2275163, 4: 2276591, 5: 2276619, 17: 2276803, 61550: 2327687, 61551: 2327686, 61559: 2336740, 61563: 2336796, 61566:
[2026-04-26 02:54:11] 2026-04-26 06:53:22,014 | INFO     | --------------------------------------------------
[2026-04-26 02:54:11] 2026-04-26 06:53:22,014 | INFO     | 
[2026-04-26 02:54:11] 2026-04-26 06:53:22,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-26 02:54:11] 2026-04-26 06:53:22,227 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,227 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,227 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,227 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-26 02:54:11] 2026-04-26 06:53:22,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-26 02:54:11] 2026-04-26 06:53:22,288 | INFO     | job 7104192972 has completed (purged errors)
[2026-04-26 02:54:11] 2026-04-26 06:53:22,289 | INFO     | overall cleanup function is called
[2026-04-26 02:54:11] 2026-04-26 06:53:22,295 | INFO     | PID=1776352 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-26 02:54:11] 2026-04-26 06:53:22,295 | INFO     | .. there are 20 such processes running
[2026-04-26 02:54:11] 2026-04-26 06:53:23,326 | INFO     | --- collectZombieJob: --- 10, [1803059]
[2026-04-26 02:54:11] 2026-04-26 06:53:23,326 | INFO     | zombie collector waiting for pid 1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:23,326 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-26 02:54:11] 2026-04-26 06:53:23,327 | INFO     | collected zombie processes
[2026-04-26 02:54:11] 2026-04-26 06:53:23,342 | INFO     | will attempt to kill all subprocesses of pid=1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:25,324 | INFO     | process IDs to be killed: [1803059] (in reverse order)
[2026-04-26 02:54:11] 2026-04-26 06:53:26,321 | WARNING  | found no corresponding commands to process id(s)
[2026-04-26 02:54:11] 2026-04-26 06:53:26,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-26 02:54:11] 2026-04-26 06:53:26,400 | INFO     | did not find any defunct processes belonging to 1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:26,460 | INFO     | did not find any defunct processes belonging to 1803059
[2026-04-26 02:54:11] 2026-04-26 06:53:26,460 | INFO     | Ready for new job
[2026-04-26 02:54:11] 2026-04-26 06:53:26,482 | INFO     | ***************************************
[2026-04-26 02:54:11] 2026-04-26 06:53:26,482 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-26 02:54:11] 2026-04-26 06:53:26,483 | INFO     | ***************************************
[2026-04-26 02:54:11] 2026-04-26 06:53:26,483 | INFO     | 
[2026-04-26 02:54:11] 2026-04-26 06:53:26,485 | INFO     | architecture information:
[2026-04-26 02:54:11] 2026-04-26 06:53:26,489 | INFO     | executing command: cat /etc/os-release
[2026-04-26 02:54:11] 2026-04-26 06:53:26,630 | INFO     | cat /etc/os-release:
[2026-04-26 02:54:11] NAME="CentOS Linux"
[2026-04-26 02:54:11] VERSION="7 (Core)"
[2026-04-26 02:54:11] ID="centos"
[2026-04-26 02:54:11] ID_LIKE="rhel fedora"
[2026-04-26 02:54:11] VERSION_ID="7"
[2026-04-26 02:54:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-26 02:54:11] ANSI_COLOR="0;31"
[2026-04-26 02:54:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-26 02:54:11] HOME_URL="https://www.centos.org/"
[2026-04-26 02:54:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-26 02:54:11] 
[2026-04-26 02:54:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-26 02:54:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-26 02:54:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-26 02:54:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-26 02:54:11] 
[2026-04-26 02:54:11] 2026-04-26 06:53:26,631 | INFO     | ***************************************
[2026-04-26 02:54:11] 2026-04-26 06:53:27,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-26 02:54:11] 2026-04-26 06:53:27,310 | INFO     | sufficient remaining disk space (52839841792 B)
[2026-04-26 02:54:11] 2026-04-26 06:53:27,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-26 02:54:11] 2026-04-26 06:53:27,311 | INFO     | current server update state: UPDATING_FINAL
[2026-04-26 02:54:11] 2026-04-26 06:53:27,311 | INFO     | update_server=False
[2026-04-26 02:54:11] 2026-04-26 06:53:27,311 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-26 02:54:11] 2026-04-26 06:53:27,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-26 02:54:11] 2026-04-26 06:53:27,312 | INFO     | aborting loop
[2026-04-26 02:54:11] 2026-04-26 06:53:27,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-26 02:54:11] 2026-04-26 06:53:27,694 | INFO     | all job control threads have been joined
[2026-04-26 02:54:11] 2026-04-26 06:53:28,318 | INFO     | [job] retrieve thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,319 | INFO     | [job] job monitor thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,319 | INFO     | [job] queue monitor thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,414 | INFO     | all data control threads have been joined
[2026-04-26 02:54:11] 2026-04-26 06:53:28,545 | INFO     | all payload control threads have been joined
[2026-04-26 02:54:11] 2026-04-26 06:53:28,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-26 02:54:11] 2026-04-26 06:53:28,622 | INFO     | [payload] failed_post thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,700 | INFO     | [job] control thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,982 | INFO     | [payload] execute_payloads thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:28,983 | INFO     | [job] validate thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,349 | INFO     | [payload] validate_post thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,393 | INFO     | [payload] validate_pre thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,419 | INFO     | [data] control thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,480 | INFO     | [job] create_data_payload thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,489 | INFO     | [data] copytool_in thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:29,553 | INFO     | [payload] control thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:30,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-26 02:54:11] 2026-04-26 06:53:30,629 | INFO     | [data] copytool_out thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:34,147 | INFO     | [data] queue_monitor thread has finished
[2026-04-26 02:54:11] 2026-04-26 06:53:55,818 | INFO     | PID=1776352 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-26 02:54:11] 2026-04-26 06:53:55,818 | INFO     | .. there are 20 such processes running
[2026-04-26 02:54:11] 2026-04-26 06:53:55,833 | INFO     | found 0 job(s) in 20 queues
[2026-04-26 02:54:11] 2026-04-26 06:53:55,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-26 02:54:11] 2026-04-26 06:53:55,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-26 02:54:11] 2026-04-26 06:54:02,811 | INFO     | [monitor] cgroup control has ended
[2026-04-26 02:54:11] 2026-04-26 06:54:04,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139841772922688)>', '<ExcThread(monitor, started 139841274619648)>']
[2026-04-26 02:54:11] 2026-04-26 06:54:04,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-26 02:54:11] 2026-04-26 06:54:04,951 | INFO     | [monitor] control thread has ended
[2026-04-26 02:54:11] 2026-04-26 06:54:09,244 | INFO     | all workflow threads have been joined
[2026-04-26 02:54:11] 2026-04-26 06:54:09,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-26 02:54:11] 2026-04-26 06:54:09,245 | INFO     | traces error code: 0
[2026-04-26 02:54:11] 2026-04-26 06:54:09,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-26 02:54:11] 2026-04-26 06:54:09,732 [wrapper] ==== pilot stdout END ====
[2026-04-26 02:54:11] 2026-04-26 06:54:09,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-26 02:54:11] 2026-04-26 06:54:09,798 [wrapper] pilotpid: 1776352
[2026-04-26 02:54:11] 2026-04-26 06:54:09,820 [wrapper] Pilot exit status: 0
[2026-04-26 02:54:11] 2026-04-26 06:54:09,916 [wrapper] pandaids: 7104192972 7104192972
[2026-04-26 02:54:11] 2026-04-26 06:54:10,248 [wrapper] cleanup supervisor_pilot 1866286 1776353
[2026-04-26 02:54:11] 2026-04-26 06:54:10,299 [wrapper] Test setup, not cleaning
[2026-04-26 02:54:11] 2026-04-26 06:54:10,360 [wrapper] apfmon messages muted
[2026-04-26 02:54:11] 2026-04-26 06:54:10,424 [wrapper] ==== wrapper stdout END ====
[2026-04-26 02:54:11] 2026-04-26 06:54:10,460 [wrapper] ==== wrapper stderr END ====
[2026-04-26 02:54:11]  *** Error codes and diagnostics ***
[2026-04-26 02:54:11]     "exeErrorCode": 0,
[2026-04-26 02:54:11]     "pilotErrorCode": 0,
[2026-04-26 02:54:11]  *** Listing of results directory ***
[2026-04-26 02:54:11] total 638972
[2026-04-26 02:54:11] drwx------. 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas    683926 Apr 25 06:46 pilot3.tar.gz
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas      5631 Apr 25 07:27 queuedata.json
[2026-04-26 02:54:11] -rwx------. 1 boincer umatlas     36322 Apr 25 07:27 runpilot2-wrapper.sh
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas       100 Apr 25 07:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-26 02:54:11] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 07:32 run_atlas
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas       105 Apr 25 07:32 job.xml
[2026-04-26 02:54:11] -rw-r--r--. 3 boincer umatlas 223570632 Apr 25 07:32 EVNT.48629115._000258.pool.root.1
[2026-04-26 02:54:11] -rw-r--r--. 3 boincer umatlas 223570632 Apr 25 07:32 ATLAS.root_0
[2026-04-26 02:54:11] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:32 start_atlas.sh
[2026-04-26 02:54:11] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 07:32 shared
[2026-04-26 02:54:11] -rw-r--r--. 2 boincer umatlas    697443 Apr 25 07:32 input.tar.gz
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas         0 Apr 25 07:32 boinc_lockfile
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas      2628 Apr 25 09:45 pandaJob.out
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas        57 Apr 25 09:45 setup.sh.local
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas    997243 Apr 25 09:46 agis_schedconf.cvmfs.json
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas       433 Apr 25 09:46 workernode_map.json
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas      6438 Apr 26 02:46 init_data.xml
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas 193235867 Apr 26 02:51 HITS.49645815._020802.pool.root.1
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas       489 Apr 26 02:51 boinc_task_state.xml
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas      1041 Apr 26 02:53 memory_monitor_summary.json
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas   1509089 Apr 26 02:53 agis_ddmendpoints.agis.ALL.json
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas    730574 Apr 26 02:53 log.49645815._020802.job.log.tgz.1
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas      6400 Apr 26 02:53 heartbeat_new.json
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas      6291 Apr 26 02:53 heartbeat.json
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas        96 Apr 26 02:53 pilot_heartbeat.json
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas        29 Apr 26 02:54 wrapper_checkpoint.txt
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas      8192 Apr 26 02:54 boinc_mmap_file
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas      4823 Apr 26 02:54 pilotlog.txt
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas   4167108 Apr 26 02:54 log.49645815._020802.job.log.1
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas       357 Apr 26 02:54 output.list
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas       410 Apr 26 02:54 runtime_log
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas   4915200 Apr 26 02:54 result.tar.gz
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas      9045 Apr 26 02:54 runtime_log.err
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas       783 Apr 26 02:54 a52ebea64ff7.diag
[2026-04-26 02:54:11] -rw-r--r--. 1 boincer umatlas     23380 Apr 26 02:54 stderr.txt
[2026-04-26 02:54:11] HITS file was successfully produced:
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas 193235867 Apr 26 02:51 shared/HITS.pool.root.1
[2026-04-26 02:54:11]  *** Contents of shared directory: ***
[2026-04-26 02:54:11] total 412544
[2026-04-26 02:54:11] -rw-r--r--. 3 boincer umatlas 223570632 Apr 25 07:32 ATLAS.root_0
[2026-04-26 02:54:11] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 07:32 start_atlas.sh
[2026-04-26 02:54:11] -rw-r--r--. 2 boincer umatlas    697443 Apr 25 07:32 input.tar.gz
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas 193235867 Apr 26 02:51 HITS.pool.root.1
[2026-04-26 02:54:11] -rw-------. 1 boincer umatlas   4915200 Apr 26 02:54 result.tar.gz
02:54:13 (1758504): run_atlas exited; CPU time 107574.471861
02:54:13 (1758504): called boinc_finish(0)

</stderr_txt>
]]>

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