Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:31:17 (18192): wrapper (7.7.26015): starting
07:31:17 (18192): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 07:31:17] Arguments: --nthreads 8
[2026-04-25 07:31:17] Threads: 8
[2026-04-25 07:31:17] Checking for CVMFS
[2026-04-25 07:31:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 07:31:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 07:31:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 07:31:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 07:31:17] 2.11.2.0 2786 47354 80272 158846 1 1 16735846 20275200 1 130560 0 8383788 99.918 1872924 18181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-25 07:31:17] CVMFS is ok
[2026-04-25 07:31:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 07:31:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 07:31:17] Further information can be found at the LHC@home message board.
[2026-04-25 07:31:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 07:31:17] Checking for apptainer binary...
[2026-04-25 07:31:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 07:31:17] Running /usr/bin/apptainer --version
[2026-04-25 07:31:17] apptainer version 1.3.2-1.el7
[2026-04-25 07:31:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 07:31:19] c-204-14.aglt2.org
[2026-04-25 07:31:19] apptainer works
[2026-04-25 07:31:19] Set ATHENA_PROC_NUMBER=8
[2026-04-25 07:31:19] Set ATHENA_CORE_NUMBER=8
[2026-04-25 07:31:19] Starting ATLAS job with PandaID=7104421272
[2026-04-25 07:31:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 10:14:09]  *** The last 200 lines of the pilot log: ***
[2026-04-25 10:14:09] 2026-04-25 14:13:22,585 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7104421272/jobReport.json
[2026-04-25 10:14:09] 2026-04-25 14:13:22,588 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-25 10:14:09] 2026-04-25 14:13:22,589 | INFO     | this job has now completed (state=finished)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,589 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,589 | INFO     | log transfer has been attempted: DONE
[2026-04-25 10:14:09] 2026-04-25 14:13:22,589 | INFO     | job 7104421272 has finished - writing final server update
[2026-04-25 10:14:09] 2026-04-25 14:13:22,590 | INFO     | total number of processed events: 400 (read)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,592 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7104421272/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,593 | INFO     | extracted standard info from prmon json
[2026-04-25 10:14:09] 2026-04-25 14:13:22,593 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 10:14:09] 2026-04-25 14:13:22,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 10:14:09] 2026-04-25 14:13:22,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 10:14:09] 2026-04-25 14:13:22,596 | INFO     | fitting pss+swap vs Time
[2026-04-25 10:14:09] 2026-04-25 14:13:22,596 | INFO     | sum of square deviations: 1246386160.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,597 | INFO     | sum of deviations: 20070828841.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,597 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,597 | INFO     | mean y: 2448893.779874214
[2026-04-25 10:14:09] 2026-04-25 14:13:22,598 | INFO     | intersect: 2448893.779874214
[2026-04-25 10:14:09] 2026-04-25 14:13:22,598 | INFO     | chi2: 2.4345444843681276
[2026-04-25 10:14:09] 2026-04-25 14:13:22,598 | INFO     | sum of square deviations: 1132458442.5
[2026-04-25 10:14:09] 2026-04-25 14:13:22,599 | INFO     | sum of deviations: 29747343173.5
[2026-04-25 10:14:09] 2026-04-25 14:13:22,599 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,599 | INFO     | mean y: 2461488.7337662335
[2026-04-25 10:14:09] 2026-04-25 14:13:22,599 | INFO     | intersect: 2461488.7337662335
[2026-04-25 10:14:09] 2026-04-25 14:13:22,600 | INFO     | chi2: 1.6632138298022663
[2026-04-25 10:14:09] 2026-04-25 14:13:22,600 | INFO     | current chi2=1.6632138298022663 (change=31.682750490634632 %)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,600 | INFO     | sum of square deviations: 1025693650.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,601 | INFO     | sum of deviations: 28749005431.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,601 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,601 | INFO     | mean y: 2460061.3288590605
[2026-04-25 10:14:09] 2026-04-25 14:13:22,601 | INFO     | intersect: 2460061.3288590605
[2026-04-25 10:14:09] 2026-04-25 14:13:22,602 | INFO     | chi2: 1.6642323308227205
[2026-04-25 10:14:09] 2026-04-25 14:13:22,602 | INFO     | current chi2=1.6642323308227205 (change=-0.06123692589637046 %)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,602 | INFO     | right removable region: 148
[2026-04-25 10:14:09] 2026-04-25 14:13:22,602 | INFO     | sum of square deviations: 1132458442.5
[2026-04-25 10:14:09] 2026-04-25 14:13:22,603 | INFO     | sum of deviations: -4498127525.5
[2026-04-25 10:14:09] 2026-04-25 14:13:22,603 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,603 | INFO     | mean y: 2481272.0974025973
[2026-04-25 10:14:09] 2026-04-25 14:13:22,603 | INFO     | intersect: 2481272.0974025973
[2026-04-25 10:14:09] 2026-04-25 14:13:22,604 | INFO     | chi2: 0.8221630537075134
[2026-04-25 10:14:09] 2026-04-25 14:13:22,604 | INFO     | current chi2=0.8221630537075134 (change=66.22928605385901 %)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,604 | INFO     | sum of square deviations: 1025693650.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | sum of deviations: -6853097582.000001
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | mean y: 2484579.302013423
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | intersect: 2484579.302013423
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | chi2: 0.8005219328599714
[2026-04-25 10:14:09] 2026-04-25 14:13:22,605 | INFO     | current chi2=0.8005219328599714 (change=2.632217630061601 %)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,606 | INFO     | left removable region: 10
[2026-04-25 10:14:09] 2026-04-25 14:13:22,606 | INFO     | sum of square deviations: 814878534.5
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | sum of deviations: 2904087450.9999995
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | mean x (centered): 0.0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | mean y: 2499057.3913043477
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | intersect: 2499057.3913043477
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | chi2: 0.0006395345907238413
[2026-04-25 10:14:09] 2026-04-25 14:13:22,607 | INFO     | current memory leak: 3.56 B/s (using 138 data points, chi2=0.00)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | could have reported an average CPU frequency of 1695 MHz (9 samples)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | ..............................
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | . Timing measurements:
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | . get job = 0 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | . initial setup = 8 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | . payload setup = 18 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,608 | INFO     | . stage-in = 0 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,609 | INFO     | . payload execution = 9654 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,609 | INFO     | . stage-out = 0 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,609 | INFO     | . log creation = 0 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,609 | INFO     | ..............................
[2026-04-25 10:14:09] 2026-04-25 14:13:22,693 | INFO     | 
[2026-04-25 10:14:09] 2026-04-25 14:13:22,693 | INFO     | job summary report
[2026-04-25 10:14:09] 2026-04-25 14:13:22,693 | INFO     | --------------------------------------------------
[2026-04-25 10:14:09] 2026-04-25 14:13:22,693 | INFO     | PanDA job id: 7104421272
[2026-04-25 10:14:09] 2026-04-25 14:13:22,693 | INFO     | task id: 49645815
[2026-04-25 10:14:09] 2026-04-25 14:13:22,694 | INFO     | errors: (none)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,694 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 10:14:09] 2026-04-25 14:13:22,694 | INFO     | pilot state: finished 
[2026-04-25 10:14:09] 2026-04-25 14:13:22,694 | INFO     | transexitcode: 0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,694 | INFO     | exeerrorcode: 0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | exeerrordiag: 
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | exitcode: 0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | exitmsg: OK
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | cpuconsumptiontime: 71129 s
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | nevents: 400
[2026-04-25 10:14:09] 2026-04-25 14:13:22,695 | INFO     | neventsw: 0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | pid: 26771
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | pgrp: 26771
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | corecount: 8
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | event service: False
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | sizes: {0: 2276507, 11: 2276507, 9675: 2305070, 9676: 2305069, 9677: 2314123, 9680: 2314179, 9683: 2314565}
[2026-04-25 10:14:09] 2026-04-25 14:13:22,696 | INFO     | --------------------------------------------------
[2026-04-25 10:14:09] 2026-04-25 14:13:22,697 | INFO     | 
[2026-04-25 10:14:09] 2026-04-25 14:13:22,697 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 10:14:09] 2026-04-25 14:13:22,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,726 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,726 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,729 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,729 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,729 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 10:14:09] 2026-04-25 14:13:22,729 | INFO     | job 7104421272 has completed (purged errors)
[2026-04-25 10:14:09] 2026-04-25 14:13:22,729 | INFO     | overall cleanup function is called
[2026-04-25 10:14:09] 2026-04-25 14:13:23,735 | INFO     | --- collectZombieJob: --- 10, [26771]
[2026-04-25 10:14:09] 2026-04-25 14:13:23,735 | INFO     | zombie collector waiting for pid 26771
[2026-04-25 10:14:09] 2026-04-25 14:13:23,736 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 10:14:09] 2026-04-25 14:13:23,736 | INFO     | collected zombie processes
[2026-04-25 10:14:09] 2026-04-25 14:13:23,736 | INFO     | will attempt to kill all subprocesses of pid=26771
[2026-04-25 10:14:09] 2026-04-25 14:13:23,814 | INFO     | process IDs to be killed: [26771] (in reverse order)
[2026-04-25 10:14:09] 2026-04-25 14:13:23,872 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 10:14:09] 2026-04-25 14:13:23,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 10:14:09] 2026-04-25 14:13:23,876 | INFO     | did not find any defunct processes belonging to 26771
[2026-04-25 10:14:09] 2026-04-25 14:13:23,880 | INFO     | did not find any defunct processes belonging to 26771
[2026-04-25 10:14:09] 2026-04-25 14:13:23,880 | INFO     | Ready for new job
[2026-04-25 10:14:09] 2026-04-25 14:13:23,882 | INFO     | ***************************************
[2026-04-25 10:14:09] 2026-04-25 14:13:23,882 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 10:14:09] 2026-04-25 14:13:23,882 | INFO     | ***************************************
[2026-04-25 10:14:09] 2026-04-25 14:13:23,883 | INFO     | 
[2026-04-25 10:14:09] 2026-04-25 14:13:23,883 | INFO     | architecture information:
[2026-04-25 10:14:09] 2026-04-25 14:13:23,884 | INFO     | executing command: cat /etc/os-release
[2026-04-25 10:14:09] 2026-04-25 14:13:23,902 | INFO     | cat /etc/os-release:
[2026-04-25 10:14:09] NAME="CentOS Linux"
[2026-04-25 10:14:09] VERSION="7 (Core)"
[2026-04-25 10:14:09] ID="centos"
[2026-04-25 10:14:09] ID_LIKE="rhel fedora"
[2026-04-25 10:14:09] VERSION_ID="7"
[2026-04-25 10:14:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 10:14:09] ANSI_COLOR="0;31"
[2026-04-25 10:14:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 10:14:09] HOME_URL="https://www.centos.org/"
[2026-04-25 10:14:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 10:14:09] 
[2026-04-25 10:14:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 10:14:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 10:14:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 10:14:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 10:14:09] 
[2026-04-25 10:14:09] 2026-04-25 14:13:23,903 | INFO     | ***************************************
[2026-04-25 10:14:09] 2026-04-25 14:13:24,406 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 10:14:09] 2026-04-25 14:13:24,426 | INFO     | sufficient remaining disk space (18541969408 B)
[2026-04-25 10:14:09] 2026-04-25 14:13:24,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 10:14:09] 2026-04-25 14:13:24,426 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 10:14:09] 2026-04-25 14:13:24,427 | INFO     | update_server=False
[2026-04-25 10:14:09] 2026-04-25 14:13:24,427 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 10:14:09] 2026-04-25 14:13:24,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 10:14:09] 2026-04-25 14:13:24,684 | INFO     | all data control threads have been joined
[2026-04-25 10:14:09] 2026-04-25 14:13:24,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 10:14:09] 2026-04-25 14:13:25,040 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 10:14:09] 2026-04-25 14:13:25,041 | INFO     | aborting loop
[2026-04-25 10:14:09] 2026-04-25 14:13:25,430 | INFO     | [job] queue monitor thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:25,432 | INFO     | [job] retrieve thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:25,500 | INFO     | all job control threads have been joined
[2026-04-25 10:14:09] 2026-04-25 14:13:25,689 | INFO     | [data] control thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:25,827 | INFO     | [payload] failed_post thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:25,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 10:14:09] 2026-04-25 14:13:25,904 | INFO     | all payload control threads have been joined
[2026-04-25 10:14:09] 2026-04-25 14:13:25,910 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,046 | INFO     | [job] job monitor thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,256 | INFO     | [job] validate thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,390 | INFO     | [payload] validate_post thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,466 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,506 | INFO     | [job] control thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,546 | INFO     | [data] copytool_in thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,734 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,759 | INFO     | [data] copytool_out thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,783 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:26,910 | INFO     | [payload] control thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:29,844 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 10:14:09] 2026-04-25 14:13:54,867 | INFO     | PID=22246 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-25 10:14:09] 2026-04-25 14:13:54,867 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 10:14:09] 2026-04-25 14:13:54,867 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 10:14:09] 2026-04-25 14:13:54,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 10:14:09] 2026-04-25 14:14:03,583 | INFO     | [monitor] cgroup control has ended
[2026-04-25 10:14:09] 2026-04-25 14:14:03,773 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913332807488)>', '<ExcThread(monitor, started 139912888170240)>']
[2026-04-25 10:14:09] 2026-04-25 14:14:03,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 10:14:09] 2026-04-25 14:14:03,908 | INFO     | [monitor] control thread has ended
[2026-04-25 10:14:09] 2026-04-25 14:14:08,798 | INFO     | all workflow threads have been joined
[2026-04-25 10:14:09] 2026-04-25 14:14:08,799 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 10:14:09] 2026-04-25 14:14:08,799 | INFO     | traces error code: 0
[2026-04-25 10:14:09] 2026-04-25 14:14:08,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 10:14:09] 2026-04-25 14:14:08,904 [wrapper] ==== pilot stdout END ====
[2026-04-25 10:14:09] 2026-04-25 14:14:08,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 10:14:09] 2026-04-25 14:14:08,913 [wrapper] pilotpid: 22246
[2026-04-25 10:14:09] 2026-04-25 14:14:08,917 [wrapper] Pilot exit status: 0
[2026-04-25 10:14:09] 2026-04-25 14:14:08,936 [wrapper] pandaids: 7104421272
[2026-04-25 10:14:09] 2026-04-25 14:14:08,993 [wrapper] cleanup supervisor_pilot 26030 22247
[2026-04-25 10:14:09] 2026-04-25 14:14:08,998 [wrapper] Test setup, not cleaning
[2026-04-25 10:14:09] 2026-04-25 14:14:09,003 [wrapper] apfmon messages muted
[2026-04-25 10:14:09] 2026-04-25 14:14:09,008 [wrapper] ==== wrapper stdout END ====
[2026-04-25 10:14:09] 2026-04-25 14:14:09,013 [wrapper] ==== wrapper stderr END ====
[2026-04-25 10:14:09]  *** Error codes and diagnostics ***
[2026-04-25 10:14:09]     "exeErrorCode": 0,
[2026-04-25 10:14:09]     "pilotErrorCode": 0,
[2026-04-25 10:14:09]  *** Listing of results directory ***
[2026-04-25 10:14:09] total 411168
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas    683926 Apr 25 06:46 pilot3.tar.gz
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas      5631 Apr 25 07:27 queuedata.json
[2026-04-25 10:14:09] -rwx------ 1 boincer umatlas     36322 Apr 25 07:27 runpilot2-wrapper.sh
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas       100 Apr 25 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 10:14:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 25 07:31 run_atlas
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas       105 Apr 25 07:31 job.xml
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas 222725329 Apr 25 07:31 EVNT.48629115._000272.pool.root.1
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas     15667 Apr 25 07:31 start_atlas.sh
[2026-04-25 10:14:09] drwxrwx--x 2 boincer umatlas      4096 Apr 25 07:31 shared
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas    697443 Apr 25 07:31 input.tar.gz
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas         0 Apr 25 07:31 boinc_lockfile
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas      2628 Apr 25 07:31 pandaJob.out
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas        57 Apr 25 07:31 setup.sh.local
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas    997219 Apr 25 07:31 agis_schedconf.cvmfs.json
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas   1509089 Apr 25 07:31 agis_ddmendpoints.agis.ALL.json
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas       433 Apr 25 07:31 workernode_map.json
[2026-04-25 10:14:09] drwx------ 5 boincer umatlas      4096 Apr 25 07:31 pilot3
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas      5824 Apr 25 10:10 init_data.xml
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas 191692763 Apr 25 10:12 HITS.49645815._020827.pool.root.1
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas       488 Apr 25 10:12 boinc_task_state.xml
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas        95 Apr 25 10:13 pilot_heartbeat.json
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas      1049 Apr 25 10:13 memory_monitor_summary.json
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas    347931 Apr 25 10:13 log.49645815._020827.job.log.tgz.1
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas      6420 Apr 25 10:13 heartbeat_new.json
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas      6311 Apr 25 10:13 heartbeat.json
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas        27 Apr 25 10:14 wrapper_checkpoint.txt
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 25 10:14 boinc_mmap_file
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas      4745 Apr 25 10:14 pilotlog.txt
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas    896437 Apr 25 10:14 log.49645815._020827.job.log.1
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas       357 Apr 25 10:14 output.list
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas       410 Apr 25 10:14 runtime_log
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas   1259520 Apr 25 10:14 result.tar.gz
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas      8964 Apr 25 10:14 runtime_log.err
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas       661 Apr 25 10:14 a52e661c1a24.diag
[2026-04-25 10:14:09] -rw-r--r-- 1 boincer umatlas     21010 Apr 25 10:14 stderr.txt
[2026-04-25 10:14:09] HITS file was successfully produced:
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas 191692763 Apr 25 10:12 shared/HITS.pool.root.1
[2026-04-25 10:14:09]  *** Contents of shared directory: ***
[2026-04-25 10:14:09] total 406644
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas 222725329 Apr 25 07:31 ATLAS.root_0
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas     15667 Apr 25 07:31 start_atlas.sh
[2026-04-25 10:14:09] -rw-r--r-- 2 boincer umatlas    697443 Apr 25 07:31 input.tar.gz
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas 191692763 Apr 25 10:12 HITS.pool.root.1
[2026-04-25 10:14:09] -rw------- 1 boincer umatlas   1259520 Apr 25 10:14 result.tar.gz
10:14:10 (18192): run_atlas exited; CPU time 71078.474529
10:14:10 (18192): called boinc_finish(0)

</stderr_txt>
]]>

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