Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:46:03 (4067171): wrapper (7.7.26015): starting
00:46:03 (4067171): wrapper: running run_atlas (--nthreads 12)
[2026-04-25 00:46:03] Arguments: --nthreads 12
[2026-04-25 00:46:03] Threads: 12
[2026-04-25 00:46:03] Checking for CVMFS
[2026-04-25 00:46:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 00:46:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 00:46:03] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 00:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 00:46:03] 2.13.3.0 6317 173687 428384 158837 1 372 35712960 39288833 8058 16776704 0 84615944 99.552 106205241 34941 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-25 00:46:03] CVMFS is ok
[2026-04-25 00:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-25 00:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-25 00:46:03] Further information can be found at the LHC@home message board.
[2026-04-25 00:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 00:46:03] Checking for apptainer binary...
[2026-04-25 00:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 00:46:03] Running /usr/bin/apptainer --version
[2026-04-25 00:46:03] apptainer version 1.4.5-2.el9
[2026-04-25 00:46:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 00:46:04] c-211-18.aglt2.org
[2026-04-25 00:46:04] apptainer works
[2026-04-25 00:46:04] Set ATHENA_PROC_NUMBER=12
[2026-04-25 00:46:04] Set ATHENA_CORE_NUMBER=12
[2026-04-25 00:46:04] Starting ATLAS job with PandaID=7101146715
[2026-04-25 00:46:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 09:43:59]  *** The last 200 lines of the pilot log: ***
[2026-04-25 09:43:59] 2026-04-25 13:43:04,185 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-25 09:43:59] 2026-04-25 13:43:04,186 | INFO     | this job has now completed (state=finished)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,186 | INFO     | log transfer has been attempted: DONE
[2026-04-25 09:43:59] 2026-04-25 13:43:04,186 | INFO     | job 7101146715 has finished - writing final server update
[2026-04-25 09:43:59] 2026-04-25 13:43:04,187 | INFO     | total number of processed events: 400 (read)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7101146715/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,268 | INFO     | extracted standard info from prmon json
[2026-04-25 09:43:59] 2026-04-25 13:43:04,268 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 09:43:59] 2026-04-25 13:43:04,272 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 09:43:59] 2026-04-25 13:43:04,272 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 09:43:59] 2026-04-25 13:43:04,364 | INFO     | fitting pss+swap vs Time
[2026-04-25 09:43:59] 2026-04-25 13:43:04,376 | INFO     | sum of square deviations: 45384212994.98251
[2026-04-25 09:43:59] 2026-04-25 13:43:04,427 | INFO     | sum of deviations: -91465323052.16507
[2026-04-25 09:43:59] 2026-04-25 13:43:04,427 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,427 | INFO     | mean y: 2694245.944971537
[2026-04-25 09:43:59] 2026-04-25 13:43:04,427 | INFO     | intersect: 2694245.944971537
[2026-04-25 09:43:59] 2026-04-25 13:43:04,428 | INFO     | chi2: 4.234840545202098
[2026-04-25 09:43:59] 2026-04-25 13:43:04,454 | INFO     | sum of square deviations: 44104740706.5
[2026-04-25 09:43:59] 2026-04-25 13:43:04,508 | INFO     | sum of deviations: 17849244701.5
[2026-04-25 09:43:59] 2026-04-25 13:43:04,509 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,509 | INFO     | mean y: 2707225.549808429
[2026-04-25 09:43:59] 2026-04-25 13:43:04,509 | INFO     | intersect: 2707225.549808429
[2026-04-25 09:43:59] 2026-04-25 13:43:04,510 | INFO     | chi2: 2.1081396993472326
[2026-04-25 09:43:59] 2026-04-25 13:43:04,510 | INFO     | current chi2=2.1081396993472326 (change=50.21914811560806 %)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,526 | INFO     | sum of square deviations: 42849451930.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,569 | INFO     | sum of deviations: 17668744329.000004
[2026-04-25 09:43:59] 2026-04-25 13:43:04,569 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,569 | INFO     | mean y: 2707203.6208897484
[2026-04-25 09:43:59] 2026-04-25 13:43:04,570 | INFO     | intersect: 2707203.6208897484
[2026-04-25 09:43:59] 2026-04-25 13:43:04,570 | INFO     | chi2: 2.108250450731077
[2026-04-25 09:43:59] 2026-04-25 13:43:04,571 | INFO     | current chi2=2.108250450731077 (change=-0.005253512557948742 %)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,571 | INFO     | right removable region: 516
[2026-04-25 09:43:59] 2026-04-25 13:43:04,592 | INFO     | sum of square deviations: 44104484992.492165
[2026-04-25 09:43:59] 2026-04-25 13:43:04,631 | INFO     | sum of deviations: -198081871375.87756
[2026-04-25 09:43:59] 2026-04-25 13:43:04,631 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,632 | INFO     | mean y: 2706907.938697318
[2026-04-25 09:43:59] 2026-04-25 13:43:04,632 | INFO     | intersect: 2706907.938697318
[2026-04-25 09:43:59] 2026-04-25 13:43:04,633 | INFO     | chi2: 2.468774109857307
[2026-04-25 09:43:59] 2026-04-25 13:43:04,633 | INFO     | current chi2=2.468774109857307 (change=41.703256982029046 %)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,647 | INFO     | sum of square deviations: 42849099834.951996
[2026-04-25 09:43:59] 2026-04-25 13:43:04,679 | INFO     | sum of deviations: -187010532095.9979
[2026-04-25 09:43:59] 2026-04-25 13:43:04,680 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,680 | INFO     | mean y: 2705553.599613153
[2026-04-25 09:43:59] 2026-04-25 13:43:04,680 | INFO     | intersect: 2705553.599613153
[2026-04-25 09:43:59] 2026-04-25 13:43:04,681 | INFO     | chi2: 2.437610773130458
[2026-04-25 09:43:59] 2026-04-25 13:43:04,681 | INFO     | current chi2=2.437610773130458 (change=1.2623000461006177 %)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,681 | INFO     | left removable region: 10
[2026-04-25 09:43:59] 2026-04-25 13:43:04,682 | INFO     | sum of square deviations: 40171912888.340065
[2026-04-25 09:43:59] 2026-04-25 13:43:04,718 | INFO     | sum of deviations: -77989944369.3519
[2026-04-25 09:43:59] 2026-04-25 13:43:04,718 | INFO     | mean x (centered): 0.0
[2026-04-25 09:43:59] 2026-04-25 13:43:04,735 | INFO     | mean y: 2719008.6501976284
[2026-04-25 09:43:59] 2026-04-25 13:43:04,735 | INFO     | intersect: 2719008.6501976284
[2026-04-25 09:43:59] 2026-04-25 13:43:04,736 | INFO     | chi2: 0.2813714107165422
[2026-04-25 09:43:59] 2026-04-25 13:43:04,736 | INFO     | current memory leak: -1.94 B/s (using 506 data points, chi2=0.28)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,737 | INFO     | could have reported an average CPU frequency of 2900 MHz (21 samples)
[2026-04-25 09:43:59] 2026-04-25 13:43:04,737 | INFO     | ..............................
[2026-04-25 09:43:59] 2026-04-25 13:43:04,738 | INFO     | . Timing measurements:
[2026-04-25 09:43:59] 2026-04-25 13:43:04,738 | INFO     | . get job = 0 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,746 | INFO     | . initial setup = 17 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,746 | INFO     | . payload setup = 34 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,746 | INFO     | . stage-in = 0 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,746 | INFO     | . payload execution = 32121 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,746 | INFO     | . stage-out = 10 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,747 | INFO     | . log creation = 3 s
[2026-04-25 09:43:59] 2026-04-25 13:43:04,747 | INFO     | ..............................
[2026-04-25 09:43:59] 2026-04-25 13:43:05,393 | INFO     | 
[2026-04-25 09:43:59] 2026-04-25 13:43:05,393 | INFO     | job summary report
[2026-04-25 09:43:59] 2026-04-25 13:43:05,393 | INFO     | --------------------------------------------------
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | PanDA job id: 7101146715
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | task id: 49263191
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | errors: (none)
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | pilot state: finished 
[2026-04-25 09:43:59] 2026-04-25 13:43:05,394 | INFO     | transexitcode: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | exeerrorcode: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | exeerrordiag: 
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | exitcode: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | exitmsg: OK
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | cpuconsumptiontime: 80516 s
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | nevents: 400
[2026-04-25 09:43:59] 2026-04-25 13:43:05,395 | INFO     | neventsw: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:05,400 | INFO     | pid: 4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:05,400 | INFO     | pgrp: 4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:05,400 | INFO     | corecount: 12
[2026-04-25 09:43:59] 2026-04-25 13:43:05,400 | INFO     | event service: False
[2026-04-25 09:43:59] 2026-04-25 13:43:05,400 | INFO     | sizes: {0: 2274000, 1: 2274685, 2: 2276514, 3: 2276514, 32160: 2315307, 32161: 2315306, 32172: 2324544, 32173: 2324682}
[2026-04-25 09:43:59] 2026-04-25 13:43:05,401 | INFO     | --------------------------------------------------
[2026-04-25 09:43:59] 2026-04-25 13:43:05,401 | INFO     | 
[2026-04-25 09:43:59] 2026-04-25 13:43:05,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 09:43:59] 2026-04-25 13:43:05,446 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,446 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,449 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 09:43:59] 2026-04-25 13:43:05,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,449 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 09:43:59] 2026-04-25 13:43:05,458 | INFO     | job 7101146715 has completed (purged errors)
[2026-04-25 09:43:59] 2026-04-25 13:43:05,458 | INFO     | overall cleanup function is called
[2026-04-25 09:43:59] 2026-04-25 13:43:06,510 | INFO     | --- collectZombieJob: --- 10, [4076111]
[2026-04-25 09:43:59] 2026-04-25 13:43:06,510 | INFO     | zombie collector waiting for pid 4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:06,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 09:43:59] 2026-04-25 13:43:06,510 | INFO     | collected zombie processes
[2026-04-25 09:43:59] 2026-04-25 13:43:06,511 | INFO     | will attempt to kill all subprocesses of pid=4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:07,631 | INFO     | process IDs to be killed: [4076111] (in reverse order)
[2026-04-25 09:43:59] 2026-04-25 13:43:07,812 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 09:43:59] 2026-04-25 13:43:07,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 09:43:59] 2026-04-25 13:43:07,844 | INFO     | did not find any defunct processes belonging to 4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:07,874 | INFO     | did not find any defunct processes belonging to 4076111
[2026-04-25 09:43:59] 2026-04-25 13:43:07,875 | INFO     | Ready for new job
[2026-04-25 09:43:59] 2026-04-25 13:43:07,877 | INFO     | ***************************************
[2026-04-25 09:43:59] 2026-04-25 13:43:07,882 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 09:43:59] 2026-04-25 13:43:07,882 | INFO     | ***************************************
[2026-04-25 09:43:59] 2026-04-25 13:43:07,882 | INFO     | 
[2026-04-25 09:43:59] 2026-04-25 13:43:07,884 | INFO     | architecture information:
[2026-04-25 09:43:59] 2026-04-25 13:43:07,885 | INFO     | executing command: cat /etc/os-release
[2026-04-25 09:43:59] 2026-04-25 13:43:07,935 | INFO     | cat /etc/os-release:
[2026-04-25 09:43:59] NAME="CentOS Linux"
[2026-04-25 09:43:59] VERSION="7 (Core)"
[2026-04-25 09:43:59] ID="centos"
[2026-04-25 09:43:59] ID_LIKE="rhel fedora"
[2026-04-25 09:43:59] VERSION_ID="7"
[2026-04-25 09:43:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 09:43:59] ANSI_COLOR="0;31"
[2026-04-25 09:43:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 09:43:59] HOME_URL="https://www.centos.org/"
[2026-04-25 09:43:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 09:43:59] 
[2026-04-25 09:43:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 09:43:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 09:43:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 09:43:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 09:43:59] 
[2026-04-25 09:43:59] 2026-04-25 13:43:07,935 | INFO     | ***************************************
[2026-04-25 09:43:59] 2026-04-25 13:43:08,440 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 09:43:59] 2026-04-25 13:43:08,710 | INFO     | sufficient remaining disk space (53017051136 B)
[2026-04-25 09:43:59] 2026-04-25 13:43:08,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 09:43:59] 2026-04-25 13:43:08,723 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 09:43:59] 2026-04-25 13:43:08,723 | INFO     | update_server=False
[2026-04-25 09:43:59] 2026-04-25 13:43:08,723 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 09:43:59] 2026-04-25 13:43:08,738 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 09:43:59] 2026-04-25 13:43:08,738 | INFO     | aborting loop
[2026-04-25 09:43:59] 2026-04-25 13:43:09,072 | INFO     | all payload control threads have been joined
[2026-04-25 09:43:59] 2026-04-25 13:43:09,278 | INFO     | all job control threads have been joined
[2026-04-25 09:43:59] 2026-04-25 13:43:09,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 09:43:59] 2026-04-25 13:43:09,730 | INFO     | [job] retrieve thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:09,743 | INFO     | [job] job monitor thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:09,778 | INFO     | all data control threads have been joined
[2026-04-25 09:43:59] 2026-04-25 13:43:10,078 | INFO     | [payload] control thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 09:43:59] 2026-04-25 13:43:10,225 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,285 | INFO     | [job] control thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 09:43:59] 2026-04-25 13:43:10,465 | INFO     | [payload] failed_post thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,655 | INFO     | [data] copytool_in thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,659 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,661 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,741 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:10,784 | INFO     | [data] control thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:11,040 | INFO     | [payload] validate_post thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:11,221 | INFO     | [job] validate thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:11,398 | INFO     | [data] copytool_out thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:11,469 | INFO     | [job] queue monitor thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:14,288 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 09:43:59] 2026-04-25 13:43:40,604 | INFO     | PID=4071194 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 09:43:59] 2026-04-25 13:43:40,605 | INFO     | .. there are 7 such processes running
[2026-04-25 09:43:59] 2026-04-25 13:43:40,605 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 09:43:59] 2026-04-25 13:43:40,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 09:43:59] 2026-04-25 13:43:40,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 09:43:59] 2026-04-25 13:43:50,888 | INFO     | [monitor] cgroup control has ended
[2026-04-25 09:43:59] 2026-04-25 13:43:52,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057970255680)>', '<ExcThread(monitor, started 140057630758656)>']
[2026-04-25 09:43:59] 2026-04-25 13:43:52,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 09:43:59] 2026-04-25 13:43:52,765 | INFO     | [monitor] control thread has ended
[2026-04-25 09:43:59] 2026-04-25 13:43:57,099 | INFO     | all workflow threads have been joined
[2026-04-25 09:43:59] 2026-04-25 13:43:57,099 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 09:43:59] 2026-04-25 13:43:57,099 | INFO     | traces error code: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:57,100 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 09:43:59] 2026-04-25 13:43:57,670 [wrapper] ==== pilot stdout END ====
[2026-04-25 09:43:59] 2026-04-25 13:43:57,740 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 09:43:59] 2026-04-25 13:43:57,807 [wrapper] pilotpid: 4071194
[2026-04-25 09:43:59] 2026-04-25 13:43:57,875 [wrapper] Pilot exit status: 0
[2026-04-25 09:43:59] 2026-04-25 13:43:58,101 [wrapper] pandaids: 7101146715
[2026-04-25 09:43:59] 2026-04-25 13:43:58,854 [wrapper] cleanup supervisor_pilot  615895 4071195
[2026-04-25 09:43:59] 2026-04-25 13:43:58,918 [wrapper] Test setup, not cleaning
[2026-04-25 09:43:59] 2026-04-25 13:43:58,955 [wrapper] apfmon messages muted
[2026-04-25 09:43:59] 2026-04-25 13:43:59,000 [wrapper] ==== wrapper stdout END ====
[2026-04-25 09:43:59] 2026-04-25 13:43:59,050 [wrapper] ==== wrapper stderr END ====
[2026-04-25 09:43:59]  *** Error codes and diagnostics ***
[2026-04-25 09:43:59]     "exeErrorCode": 0,
[2026-04-25 09:43:59]     "pilotErrorCode": 0,
[2026-04-25 09:43:59]  *** Listing of results directory ***
[2026-04-25 09:43:59] total 424112
[2026-04-25 09:43:59] -rwx------. 1 boincer umatlas     36322 Apr 23 07:22 runpilot2-wrapper.sh
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas    683926 Apr 24 23:13 pilot3.tar.gz
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas      5631 Apr 24 23:13 queuedata.json
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas       100 Apr 25 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 09:43:59] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 25 00:46 run_atlas
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas       105 Apr 25 00:46 job.xml
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas 224881445 Apr 25 00:46 EVNT.49263189._000393.pool.root.1
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 00:46 start_atlas.sh
[2026-04-25 09:43:59] drwxrwx--x. 2 boincer umatlas      4096 Apr 25 00:46 shared
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas    697429 Apr 25 00:46 input.tar.gz
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas         0 Apr 25 00:46 boinc_lockfile
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas      2575 Apr 25 00:46 pandaJob.out
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas        57 Apr 25 00:46 setup.sh.local
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas    997218 Apr 25 00:46 agis_schedconf.cvmfs.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas       435 Apr 25 00:46 workernode_map.json
[2026-04-25 09:43:59] drwx------. 5 boincer umatlas      4096 Apr 25 00:46 pilot3
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas 198854223 Apr 25 09:39 HITS.49263191._073792.pool.root.1
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas       488 Apr 25 09:40 boinc_task_state.xml
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas      6440 Apr 25 09:40 init_data.xml
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas      1041 Apr 25 09:42 memory_monitor_summary.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas        95 Apr 25 09:42 pilot_heartbeat.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas   1509089 Apr 25 09:42 agis_ddmendpoints.agis.ALL.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas    600820 Apr 25 09:43 log.49263191._073792.job.log.tgz.1
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas      6405 Apr 25 09:43 heartbeat_new.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas      6296 Apr 25 09:43 heartbeat.json
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas      4822 Apr 25 09:43 pilotlog.txt
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas      8192 Apr 25 09:43 boinc_mmap_file
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas        28 Apr 25 09:43 wrapper_checkpoint.txt
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas   2605312 Apr 25 09:43 log.49263191._073792.job.log.1
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas       357 Apr 25 09:43 output.list
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas       410 Apr 25 09:43 runtime_log
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas   3225600 Apr 25 09:43 result.tar.gz
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas      8967 Apr 25 09:43 runtime_log.err
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas       657 Apr 25 09:43 0100016c4626.diag
[2026-04-25 09:43:59] -rw-r--r--. 1 boincer umatlas     21054 Apr 25 09:43 stderr.txt
[2026-04-25 09:43:59] HITS file was successfully produced:
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas 198854223 Apr 25 09:39 shared/HITS.pool.root.1
[2026-04-25 09:43:59]  *** Contents of shared directory: ***
[2026-04-25 09:43:59] total 417668
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas 224881445 Apr 25 00:46 ATLAS.root_0
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas     15667 Apr 25 00:46 start_atlas.sh
[2026-04-25 09:43:59] -rw-r--r--. 2 boincer umatlas    697429 Apr 25 00:46 input.tar.gz
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas 198854223 Apr 25 09:39 HITS.pool.root.1
[2026-04-25 09:43:59] -rw-------. 1 boincer umatlas   3225600 Apr 25 09:43 result.tar.gz
09:44:00 (4067171): run_atlas exited; CPU time 81381.138135
09:44:00 (4067171): called boinc_finish(0)

</stderr_txt>
]]>

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