Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:14:29 (6355): wrapper (7.7.26015): starting
09:14:29 (6355): wrapper: running run_atlas (--nthreads 8)
[2026-04-25 09:14:29] Arguments: --nthreads 8
[2026-04-25 09:14:29] Threads: 8
[2026-04-25 09:14:29] Checking for CVMFS
[2026-04-25 09:14:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-25 09:14:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-25 09:14:33] Running cvmfs_config stat atlas.cern.ch
[2026-04-25 09:14:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-25 09:14:35] 2.11.2.0 13298 13817 97572 158840 1 266 17353909 25165824 591 130560 0 4727297 99.872 5092436 19793 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-25 09:14:35] CVMFS is ok
[2026-04-25 09:14:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-25 09:14:35] Checking for apptainer binary...
[2026-04-25 09:14:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-25 09:14:35] Running /usr/bin/apptainer --version
[2026-04-25 09:14:35] apptainer version 1.3.2-1.el7
[2026-04-25 09:14:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-25 09:14:58] cg-vwn457.simple-grid.lan
[2026-04-25 09:14:58] apptainer works
[2026-04-25 09:14:58] Set ATHENA_PROC_NUMBER=8
[2026-04-25 09:14:58] Set ATHENA_CORE_NUMBER=8
[2026-04-25 09:14:58] Starting ATLAS job with PandaID=7101146662
[2026-04-25 09:14:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 11:50:42]  *** The last 200 lines of the pilot log: ***
[2026-04-25 11:50:42] 2026-04-25 09:49:42,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,685 | INFO     | log transfer has been attempted: DONE
[2026-04-25 11:50:42] 2026-04-25 09:49:42,685 | INFO     | job 7101146662 has finished - writing final server update
[2026-04-25 11:50:42] 2026-04-25 09:49:42,685 | INFO     | total number of processed events: 400 (read)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,687 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7101146662/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,688 | INFO     | extracted standard info from prmon json
[2026-04-25 11:50:42] 2026-04-25 09:49:42,688 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 11:50:42] 2026-04-25 09:49:42,688 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 11:50:42] 2026-04-25 09:49:42,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 11:50:42] 2026-04-25 09:49:42,691 | INFO     | fitting pss+swap vs Time
[2026-04-25 11:50:42] 2026-04-25 09:49:42,692 | INFO     | sum of square deviations: 906703512.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,693 | INFO     | sum of deviations: -17573263872.999992
[2026-04-25 11:50:42] 2026-04-25 09:49:42,693 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,693 | INFO     | mean y: 2529357.062937063
[2026-04-25 11:50:42] 2026-04-25 09:49:42,693 | INFO     | intersect: 2529357.062937063
[2026-04-25 11:50:42] 2026-04-25 09:49:42,694 | INFO     | chi2: 2.4557144017857104
[2026-04-25 11:50:42] 2026-04-25 09:49:42,694 | INFO     | sum of square deviations: 814878534.5
[2026-04-25 11:50:42] 2026-04-25 09:49:42,695 | INFO     | sum of deviations: -7237816011.499982
[2026-04-25 11:50:42] 2026-04-25 09:49:42,695 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,695 | INFO     | mean y: 2546078.5289855073
[2026-04-25 11:50:42] 2026-04-25 09:49:42,695 | INFO     | intersect: 2546078.5289855073
[2026-04-25 11:50:42] 2026-04-25 09:49:42,696 | INFO     | chi2: 1.694844509539806
[2026-04-25 11:50:42] 2026-04-25 09:49:42,696 | INFO     | current chi2=1.694844509539806 (change=30.983647434433998 %)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,696 | INFO     | sum of square deviations: 729472282.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | sum of deviations: -6532077274.000001
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | mean y: 2547339.2180451127
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | intersect: 2547339.2180451127
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | chi2: 1.694604424998409
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | current chi2=1.694604424998409 (change=0.014165579204796861 %)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,697 | INFO     | right removable region: 132
[2026-04-25 11:50:42] 2026-04-25 09:49:42,698 | INFO     | sum of square deviations: 814878534.5
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | sum of deviations: -39749177216.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | mean y: 2565600.072463768
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | intersect: 2565600.072463768
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | chi2: 0.9287522468630192
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | current chi2=0.9287522468630192 (change=62.17995683098724 %)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,699 | INFO     | sum of square deviations: 729472282.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,700 | INFO     | sum of deviations: -36605383006.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,700 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,700 | INFO     | mean y: 2559972.3533834587
[2026-04-25 11:50:42] 2026-04-25 09:49:42,701 | INFO     | intersect: 2559972.3533834587
[2026-04-25 11:50:42] 2026-04-25 09:49:42,701 | INFO     | chi2: 0.9292230672704013
[2026-04-25 11:50:42] 2026-04-25 09:49:42,701 | INFO     | current chi2=0.9292230672704013 (change=-0.05069386469560292 %)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,701 | INFO     | left removable region: 10
[2026-04-25 11:50:42] 2026-04-25 09:49:42,701 | INFO     | sum of square deviations: 563026370.5
[2026-04-25 11:50:42] 2026-04-25 09:49:42,702 | INFO     | sum of deviations: -24791782382.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,702 | INFO     | mean x (centered): 0.0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,702 | INFO     | mean y: 2582473.4918032787
[2026-04-25 11:50:42] 2026-04-25 09:49:42,702 | INFO     | intersect: 2582473.4918032787
[2026-04-25 11:50:42] 2026-04-25 09:49:42,702 | INFO     | chi2: 0.12140961722830879
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | current memory leak: -44.03 B/s (using 122 data points, chi2=0.12)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | could have reported an average CPU frequency of 2250 MHz (8 samples)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | ..............................
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | . Timing measurements:
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | . get job = 0 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,703 | INFO     | . initial setup = 117 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | . payload setup = 163 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | . stage-in = 0 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | . payload execution = 8718 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | . stage-out = 0 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | . log creation = 0 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,704 | INFO     | ..............................
[2026-04-25 11:50:42] 2026-04-25 09:49:42,811 | INFO     | 
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | job summary report
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | --------------------------------------------------
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | PanDA job id: 7101146662
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | task id: 49263191
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | errors: (none)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 11:50:42] 2026-04-25 09:49:42,812 | INFO     | pilot state: finished 
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | transexitcode: 0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | exeerrorcode: 0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | exeerrordiag: 
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | exitcode: 0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | exitmsg: OK
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | cpuconsumptiontime: 51806 s
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | nevents: 400
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | neventsw: 0
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | pid: 15002
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | pgrp: 15002
[2026-04-25 11:50:42] 2026-04-25 09:49:42,813 | INFO     | corecount: 8
[2026-04-25 11:50:42] 2026-04-25 09:49:42,814 | INFO     | event service: False
[2026-04-25 11:50:42] 2026-04-25 09:49:42,814 | INFO     | sizes: {0: 2274006, 1: 2274692, 2: 2276521, 13: 2276521, 8885: 2304563, 8887: 2313563, 8888: 2313941}
[2026-04-25 11:50:42] 2026-04-25 09:49:42,814 | INFO     | --------------------------------------------------
[2026-04-25 11:50:42] 2026-04-25 09:49:42,814 | INFO     | 
[2026-04-25 11:50:42] 2026-04-25 09:49:42,814 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | job 7101146662 has completed (purged errors)
[2026-04-25 11:50:42] 2026-04-25 09:49:42,842 | INFO     | overall cleanup function is called
[2026-04-25 11:50:42] 2026-04-25 09:49:43,850 | INFO     | --- collectZombieJob: --- 10, [15002]
[2026-04-25 11:50:42] 2026-04-25 09:49:43,851 | INFO     | zombie collector waiting for pid 15002
[2026-04-25 11:50:42] 2026-04-25 09:49:43,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 11:50:42] 2026-04-25 09:49:43,851 | INFO     | collected zombie processes
[2026-04-25 11:50:42] 2026-04-25 09:49:43,851 | INFO     | will attempt to kill all subprocesses of pid=15002
[2026-04-25 11:50:42] 2026-04-25 09:49:43,899 | INFO     | process IDs to be killed: [15002] (in reverse order)
[2026-04-25 11:50:42] 2026-04-25 09:49:43,966 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 11:50:42] 2026-04-25 09:49:43,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 11:50:42] 2026-04-25 09:49:43,968 | INFO     | did not find any defunct processes belonging to 15002
[2026-04-25 11:50:42] 2026-04-25 09:49:43,970 | INFO     | did not find any defunct processes belonging to 15002
[2026-04-25 11:50:42] 2026-04-25 09:49:43,970 | INFO     | Ready for new job
[2026-04-25 11:50:42] 2026-04-25 09:49:43,971 | INFO     | ***************************************
[2026-04-25 11:50:42] 2026-04-25 09:49:43,972 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 11:50:42] 2026-04-25 09:49:43,972 | INFO     | ***************************************
[2026-04-25 11:50:42] 2026-04-25 09:49:43,972 | INFO     | 
[2026-04-25 11:50:42] 2026-04-25 09:49:43,972 | INFO     | pilot is running in a VM
[2026-04-25 11:50:42] 2026-04-25 09:49:43,972 | INFO     | architecture information:
[2026-04-25 11:50:42] 2026-04-25 09:49:43,973 | INFO     | executing command: cat /etc/os-release
[2026-04-25 11:50:42] 2026-04-25 09:49:43,991 | INFO     | cat /etc/os-release:
[2026-04-25 11:50:42] NAME="CentOS Linux"
[2026-04-25 11:50:42] VERSION="7 (Core)"
[2026-04-25 11:50:42] ID="centos"
[2026-04-25 11:50:42] ID_LIKE="rhel fedora"
[2026-04-25 11:50:42] VERSION_ID="7"
[2026-04-25 11:50:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 11:50:42] ANSI_COLOR="0;31"
[2026-04-25 11:50:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 11:50:42] HOME_URL="https://www.centos.org/"
[2026-04-25 11:50:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 11:50:42] 
[2026-04-25 11:50:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 11:50:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 11:50:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 11:50:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 11:50:42] 
[2026-04-25 11:50:42] 2026-04-25 09:49:43,991 | INFO     | ***************************************
[2026-04-25 11:50:42] 2026-04-25 09:49:44,494 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-04-25 11:50:42] 2026-04-25 09:49:44,511 | INFO     | sufficient remaining disk space (495921922048 B)
[2026-04-25 11:50:42] 2026-04-25 09:49:44,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 11:50:42] 2026-04-25 09:49:44,512 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 11:50:42] 2026-04-25 09:49:44,512 | INFO     | update_server=False
[2026-04-25 11:50:42] 2026-04-25 09:49:44,512 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 11:50:42] 2026-04-25 09:49:44,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 11:50:42] 2026-04-25 09:49:44,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 11:50:42] 2026-04-25 09:49:44,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 11:50:42] 2026-04-25 09:49:44,514 | INFO     | aborting loop
[2026-04-25 11:50:42] 2026-04-25 09:49:44,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 11:50:42] 2026-04-25 09:49:45,230 | INFO     | all data control threads have been joined
[2026-04-25 11:50:42] 2026-04-25 09:49:45,518 | INFO     | [job] retrieve thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:45,519 | INFO     | [job] queue monitor thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:45,520 | INFO     | [job] job monitor thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:45,731 | INFO     | [payload] validate_post thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:45,755 | INFO     | [payload] failed_post thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:45,767 | INFO     | all payload control threads have been joined
[2026-04-25 11:50:42] 2026-04-25 09:49:46,070 | INFO     | all job control threads have been joined
[2026-04-25 11:50:42] 2026-04-25 09:49:46,236 | INFO     | [data] control thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,378 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,379 | INFO     | [data] copytool_in thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,773 | INFO     | [payload] control thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,823 | INFO     | [job] validate thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,845 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,900 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:46,912 | INFO     | [data] copytool_out thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:47,076 | INFO     | [job] control thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:48,520 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:49:54,862 | INFO     | job.realtimelogging is not enabled
[2026-04-25 11:50:42] 2026-04-25 09:49:55,867 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 11:50:42] 2026-04-25 09:50:14,134 | INFO     | PID=10425 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-25 11:50:42] 2026-04-25 09:50:14,134 | INFO     | .. there are 2 such processes running
[2026-04-25 11:50:42] 2026-04-25 09:50:14,136 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 11:50:42] 2026-04-25 09:50:14,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 11:50:42] 2026-04-25 09:50:14,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 11:50:42] 2026-04-25 09:50:35,246 | INFO     | [monitor] cgroup control has ended
[2026-04-25 11:50:42] 2026-04-25 09:50:37,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942185584448)>', '<ExcThread(monitor, started 139941728196352)>']
[2026-04-25 11:50:42] 2026-04-25 09:50:37,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 11:50:42] 2026-04-25 09:50:37,253 | INFO     | [monitor] control thread has ended
[2026-04-25 11:50:42] 2026-04-25 09:50:42,155 | INFO     | all workflow threads have been joined
[2026-04-25 11:50:42] 2026-04-25 09:50:42,155 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 11:50:42] 2026-04-25 09:50:42,155 | INFO     | traces error code: 0
[2026-04-25 11:50:42] 2026-04-25 09:50:42,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 11:50:42] 2026-04-25 09:50:42,292 [wrapper] ==== pilot stdout END ====
[2026-04-25 11:50:42] 2026-04-25 09:50:42,296 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 11:50:42] 2026-04-25 09:50:42,300 [wrapper] pilotpid: 10425
[2026-04-25 11:50:42] 2026-04-25 09:50:42,304 [wrapper] Pilot exit status: 0
[2026-04-25 11:50:42] 2026-04-25 09:50:42,323 [wrapper] pandaids: 7101146662
[2026-04-25 11:50:42] 2026-04-25 09:50:42,369 [wrapper] cleanup supervisor_pilot 25630 10426
[2026-04-25 11:50:42] 2026-04-25 09:50:42,377 [wrapper] Test setup, not cleaning
[2026-04-25 11:50:42] 2026-04-25 09:50:42,383 [wrapper] apfmon messages muted
[2026-04-25 11:50:42] 2026-04-25 09:50:42,387 [wrapper] ==== wrapper stdout END ====
[2026-04-25 11:50:42] 2026-04-25 09:50:42,393 [wrapper] ==== wrapper stderr END ====
[2026-04-25 11:50:42]  *** Error codes and diagnostics ***
[2026-04-25 11:50:42]     "exeErrorCode": 0,
[2026-04-25 11:50:42]     "pilotErrorCode": 0,
[2026-04-25 11:50:42]  *** Listing of results directory ***
[2026-04-25 11:50:42] total 413480
[2026-04-25 11:50:42] -rwx------. 1 boinc boinc     36322 Apr 23 13:22 runpilot2-wrapper.sh
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc      5631 Apr 25 02:36 queuedata.json
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc    683926 Apr 25 02:36 pilot3.tar.gz
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc       100 Apr 25 09:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 11:50:42] -rwxr-xr-x. 1 boinc boinc      7986 Apr 25 09:14 run_atlas
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc       105 Apr 25 09:14 job.xml
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc      6306 Apr 25 09:14 init_data.xml
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc 222408362 Apr 25 09:14 EVNT.49263189._001013.pool.root.1
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc     15667 Apr 25 09:14 start_atlas.sh
[2026-04-25 11:50:42] drwxrwx--x. 2 boinc boinc        68 Apr 25 09:14 shared
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc    697431 Apr 25 09:14 input.tar.gz
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc         0 Apr 25 09:14 boinc_lockfile
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc      2578 Apr 25 09:14 pandaJob.out
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc   1509089 Apr 25 09:19 agis_ddmendpoints.agis.ALL.json
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc       413 Apr 25 09:21 workernode_map.json
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc    997218 Apr 25 09:21 agis_schedconf.cvmfs.json
[2026-04-25 11:50:42] drwx------. 5 boinc boinc      4096 Apr 25 09:21 pilot3
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc 194500701 Apr 25 11:49 HITS.49263191._073739.pool.root.1
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc       488 Apr 25 11:49 boinc_task_state.xml
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc      1010 Apr 25 11:49 memory_monitor_summary.json
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc    341635 Apr 25 11:49 log.49263191._073739.job.log.tgz.1
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc      6330 Apr 25 11:49 heartbeat_new.json
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc      6221 Apr 25 11:49 heartbeat.json
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc        95 Apr 25 11:50 pilot_heartbeat.json
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc      8192 Apr 25 11:50 boinc_mmap_file
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc        27 Apr 25 11:50 wrapper_checkpoint.txt
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc      4956 Apr 25 11:50 pilotlog.txt
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc    847543 Apr 25 11:50 log.49263191._073739.job.log.1
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc       357 Apr 25 11:50 output.list
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc       410 Apr 25 11:50 runtime_log
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc   1208320 Apr 25 11:50 result.tar.gz
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc      8454 Apr 25 11:50 runtime_log.err
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc       652 Apr 25 11:50 00ff2f8acb01.diag
[2026-04-25 11:50:42] -rw-r--r--. 1 boinc boinc     20615 Apr 25 11:50 stderr.txt
[2026-04-25 11:50:42] HITS file was successfully produced:
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc 194500701 Apr 25 11:49 shared/HITS.pool.root.1
[2026-04-25 11:50:42]  *** Contents of shared directory: ***
[2026-04-25 11:50:42] total 409020
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc 222408362 Apr 25 09:14 ATLAS.root_0
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc     15667 Apr 25 09:14 start_atlas.sh
[2026-04-25 11:50:42] -rw-r--r--. 2 boinc boinc    697431 Apr 25 09:14 input.tar.gz
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc 194500701 Apr 25 11:49 HITS.pool.root.1
[2026-04-25 11:50:42] -rw-------. 1 boinc boinc   1208320 Apr 25 11:50 result.tar.gz
11:50:44 (6355): run_atlas exited; CPU time 51873.423614
11:50:44 (6355): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN