Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:39:05 (25749): wrapper (7.7.26015): starting
21:39:05 (25749): wrapper: running run_atlas (--nthreads 8)
[2026-04-24 21:39:05] Arguments: --nthreads 8
[2026-04-24 21:39:05] Threads: 8
[2026-04-24 21:39:05] Checking for CVMFS
[2026-04-24 21:39:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-24 21:39:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-24 21:39:06] Running cvmfs_config stat atlas.cern.ch
[2026-04-24 21:39:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-24 21:39:06] 2.11.2.0 31190 105781 78924 158831 3 1 13564250 20275201 1 130560 0 24442121 99.938 4156748 20612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-24 21:39:06] CVMFS is ok
[2026-04-24 21:39:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 21:39:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 21:39:06] Further information can be found at the LHC@home message board.
[2026-04-24 21:39:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 21:39:06] Checking for apptainer binary...
[2026-04-24 21:39:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-24 21:39:06] Running /usr/bin/apptainer --version
[2026-04-24 21:39:06] apptainer version 1.3.2-1.el7
[2026-04-24 21:39:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 21:39:08] c-115-9.aglt2.org
[2026-04-24 21:39:08] apptainer works
[2026-04-24 21:39:08] Set ATHENA_PROC_NUMBER=8
[2026-04-24 21:39:08] Set ATHENA_CORE_NUMBER=8
[2026-04-24 21:39:08] Starting ATLAS job with PandaID=7098006013
[2026-04-24 21:39:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-24 23:34:50]  *** The last 200 lines of the pilot log: ***
[2026-04-24 23:34:50] 2026-04-25 03:33:52,258 | INFO     | job 7098006013 has state=finished
[2026-04-24 23:34:50] 2026-04-25 03:33:52,258 | INFO     | preparing for final server update for job 7098006013 in state='finished'
[2026-04-24 23:34:50] 2026-04-25 03:33:52,259 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7098006013/jobReport.json
[2026-04-24 23:34:50] 2026-04-25 03:33:52,262 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-24 23:34:50] 2026-04-25 03:33:52,263 | INFO     | this job has now completed (state=finished)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,263 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,263 | INFO     | log transfer has been attempted: DONE
[2026-04-24 23:34:50] 2026-04-25 03:33:52,264 | INFO     | job 7098006013 has finished - writing final server update
[2026-04-24 23:34:50] 2026-04-25 03:33:52,264 | INFO     | total number of processed events: 400 (read)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,266 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7098006013/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,267 | INFO     | extracted standard info from prmon json
[2026-04-24 23:34:50] 2026-04-25 03:33:52,267 | INFO     | extracted standard memory fields from prmon json
[2026-04-24 23:34:50] 2026-04-25 03:33:52,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-24 23:34:50] 2026-04-25 03:33:52,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-24 23:34:50] 2026-04-25 03:33:52,271 | INFO     | fitting pss+swap vs Time
[2026-04-24 23:34:50] 2026-04-25 03:33:52,271 | INFO     | sum of square deviations: 435610028.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,272 | INFO     | sum of deviations: 5843880794.499997
[2026-04-24 23:34:50] 2026-04-25 03:33:52,272 | INFO     | mean x (centered): 0.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,272 | INFO     | mean y: 2536443.8839285714
[2026-04-24 23:34:50] 2026-04-25 03:33:52,272 | INFO     | intersect: 2536443.8839285714
[2026-04-24 23:34:50] 2026-04-25 03:33:52,273 | INFO     | chi2: 1.6715702678686295
[2026-04-24 23:34:50] 2026-04-25 03:33:52,273 | INFO     | sum of square deviations: 379832238.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,273 | INFO     | sum of deviations: 5800615171.999999
[2026-04-24 23:34:50] 2026-04-25 03:33:52,273 | INFO     | mean x (centered): 0.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | mean y: 2536325.523364486
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | intersect: 2536325.523364486
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | chi2: 1.6748174030550906
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | current chi2=1.6748174030550906 (change=-0.19425657711664518 %)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | right removable region: 106
[2026-04-24 23:34:50] 2026-04-25 03:33:52,274 | INFO     | sum of square deviations: 379832238.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,275 | INFO     | sum of deviations: -11872021300.000002
[2026-04-24 23:34:50] 2026-04-25 03:33:52,275 | INFO     | mean x (centered): 0.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,275 | INFO     | mean y: 2583919.925233645
[2026-04-24 23:34:50] 2026-04-25 03:33:52,275 | INFO     | intersect: 2583919.925233645
[2026-04-24 23:34:50] 2026-04-25 03:33:52,276 | INFO     | chi2: 0.10642567957150723
[2026-04-24 23:34:50] 2026-04-25 03:33:52,276 | INFO     | current chi2=0.10642567957150723 (change=93.63319139989206 %)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,276 | INFO     | sum of square deviations: 329031285.5
[2026-04-24 23:34:50] 2026-04-25 03:33:52,276 | INFO     | sum of deviations: -11395137330.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,276 | INFO     | mean x (centered): 0.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | mean y: 2582301.294117647
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | intersect: 2582301.294117647
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | chi2: 0.08457091789558883
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | current chi2=0.08457091789558883 (change=20.535233379679024 %)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | left removable region: 10
[2026-04-24 23:34:50] 2026-04-25 03:33:52,277 | INFO     | sum of square deviations: 274312120.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,278 | INFO     | sum of deviations: -10586336866.000002
[2026-04-24 23:34:50] 2026-04-25 03:33:52,278 | INFO     | mean x (centered): 0.0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,278 | INFO     | mean y: 2585009.4583333335
[2026-04-24 23:34:50] 2026-04-25 03:33:52,278 | INFO     | intersect: 2585009.4583333335
[2026-04-24 23:34:50] 2026-04-25 03:33:52,279 | INFO     | chi2: 0.08072319645280593
[2026-04-24 23:34:50] 2026-04-25 03:33:52,279 | INFO     | current memory leak: -38.59 B/s (using 96 data points, chi2=0.08)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,279 | INFO     | could have reported an average CPU frequency of 1762 MHz (7 samples)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,279 | INFO     | ..............................
[2026-04-24 23:34:50] 2026-04-25 03:33:52,279 | INFO     | . Timing measurements:
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . get job = 0 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . initial setup = 8 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . payload setup = 17 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . stage-in = 0 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . payload execution = 6821 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . stage-out = 0 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | . log creation = 0 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,280 | INFO     | ..............................
[2026-04-24 23:34:50] 2026-04-25 03:33:52,360 | INFO     | 
[2026-04-24 23:34:50] 2026-04-25 03:33:52,361 | INFO     | job summary report
[2026-04-24 23:34:50] 2026-04-25 03:33:52,361 | INFO     | --------------------------------------------------
[2026-04-24 23:34:50] 2026-04-25 03:33:52,361 | INFO     | PanDA job id: 7098006013
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | task id: 49545114
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | errors: (none)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | pilot state: finished 
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | transexitcode: 0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,362 | INFO     | exeerrorcode: 0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | exeerrordiag: 
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | exitcode: 0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | exitmsg: OK
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | cpuconsumptiontime: 50123 s
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | nevents: 400
[2026-04-24 23:34:50] 2026-04-25 03:33:52,363 | INFO     | neventsw: 0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,364 | INFO     | pid: 1645
[2026-04-24 23:34:50] 2026-04-25 03:33:52,364 | INFO     | pgrp: 1645
[2026-04-24 23:34:50] 2026-04-25 03:33:52,364 | INFO     | corecount: 8
[2026-04-24 23:34:50] 2026-04-25 03:33:52,364 | INFO     | event service: False
[2026-04-24 23:34:50] 2026-04-25 03:33:52,364 | INFO     | sizes: {0: 2276453, 11: 2276453, 6842: 2303699, 6844: 2312697, 6847: 2312947}
[2026-04-24 23:34:50] 2026-04-25 03:33:52,365 | INFO     | --------------------------------------------------
[2026-04-24 23:34:50] 2026-04-25 03:33:52,365 | INFO     | 
[2026-04-24 23:34:50] 2026-04-25 03:33:52,365 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-24 23:34:50] 2026-04-25 03:33:52,397 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,397 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,397 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,397 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,400 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,401 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-24 23:34:50] 2026-04-25 03:33:52,401 | INFO     | job 7098006013 has completed (purged errors)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,401 | INFO     | overall cleanup function is called
[2026-04-24 23:34:50] 2026-04-25 03:33:52,520 | WARNING  | process 1645 can no longer be monitored (due to stat problems) - aborting
[2026-04-24 23:34:50] 2026-04-25 03:33:52,589 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 23:34:50] 2026-04-25 03:33:52,675 | INFO     | number of running child processes to parent process 1645: 1
[2026-04-24 23:34:50] 2026-04-25 03:33:52,675 | INFO     | maximum number of monitored processes: 6
[2026-04-24 23:34:50] 2026-04-25 03:33:52,675 | INFO     | aborting job monitoring since job object (job id=7098006013) has expired
[2026-04-24 23:34:50] 2026-04-25 03:33:53,409 | INFO     | --- collectZombieJob: --- 10, [1645]
[2026-04-24 23:34:50] 2026-04-25 03:33:53,409 | INFO     | zombie collector waiting for pid 1645
[2026-04-24 23:34:50] 2026-04-25 03:33:53,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-24 23:34:50] 2026-04-25 03:33:53,410 | INFO     | collected zombie processes
[2026-04-24 23:34:50] 2026-04-25 03:33:53,410 | INFO     | will attempt to kill all subprocesses of pid=1645
[2026-04-24 23:34:50] 2026-04-25 03:33:53,489 | INFO     | process IDs to be killed: [1645] (in reverse order)
[2026-04-24 23:34:50] 2026-04-25 03:33:53,551 | WARNING  | found no corresponding commands to process id(s)
[2026-04-24 23:34:50] 2026-04-25 03:33:53,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-24 23:34:50] 2026-04-25 03:33:53,557 | INFO     | did not find any defunct processes belonging to 1645
[2026-04-24 23:34:50] 2026-04-25 03:33:53,561 | INFO     | did not find any defunct processes belonging to 1645
[2026-04-24 23:34:50] 2026-04-25 03:33:53,562 | INFO     | Ready for new job
[2026-04-24 23:34:50] 2026-04-25 03:33:53,564 | INFO     | **************************************
[2026-04-24 23:34:50] 2026-04-25 03:33:53,564 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-24 23:34:50] 2026-04-25 03:33:53,564 | INFO     | **************************************
[2026-04-24 23:34:50] 2026-04-25 03:33:53,564 | INFO     | 
[2026-04-24 23:34:50] 2026-04-25 03:33:53,565 | INFO     | architecture information:
[2026-04-24 23:34:50] 2026-04-25 03:33:53,565 | INFO     | executing command: cat /etc/os-release
[2026-04-24 23:34:50] 2026-04-25 03:33:53,584 | INFO     | cat /etc/os-release:
[2026-04-24 23:34:50] NAME="CentOS Linux"
[2026-04-24 23:34:50] VERSION="7 (Core)"
[2026-04-24 23:34:50] ID="centos"
[2026-04-24 23:34:50] ID_LIKE="rhel fedora"
[2026-04-24 23:34:50] VERSION_ID="7"
[2026-04-24 23:34:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-24 23:34:50] ANSI_COLOR="0;31"
[2026-04-24 23:34:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-24 23:34:50] HOME_URL="https://www.centos.org/"
[2026-04-24 23:34:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-24 23:34:50] 
[2026-04-24 23:34:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-24 23:34:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-24 23:34:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-24 23:34:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-24 23:34:50] 
[2026-04-24 23:34:50] 2026-04-25 03:33:53,584 | INFO     | **************************************
[2026-04-24 23:34:50] 2026-04-25 03:33:54,088 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-24 23:34:50] 2026-04-25 03:33:54,108 | INFO     | sufficient remaining disk space (18444451840 B)
[2026-04-24 23:34:50] 2026-04-25 03:33:54,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-24 23:34:50] 2026-04-25 03:33:54,109 | INFO     | current server update state: UPDATING_FINAL
[2026-04-24 23:34:50] 2026-04-25 03:33:54,109 | INFO     | update_server=False
[2026-04-24 23:34:50] 2026-04-25 03:33:54,110 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-24 23:34:50] 2026-04-25 03:33:54,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-24 23:34:50] 2026-04-25 03:33:54,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-24 23:34:50] 2026-04-25 03:33:54,111 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-24 23:34:50] 2026-04-25 03:33:54,111 | INFO     | aborting loop
[2026-04-24 23:34:50] 2026-04-25 03:33:54,198 | INFO     | all payload control threads have been joined
[2026-04-24 23:34:50] 2026-04-25 03:33:54,775 | INFO     | all job control threads have been joined
[2026-04-24 23:34:50] 2026-04-25 03:33:54,931 | INFO     | all data control threads have been joined
[2026-04-24 23:34:50] 2026-04-25 03:33:55,115 | INFO     | [job] retrieve thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,116 | INFO     | [job] queue monitor thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,117 | INFO     | [job] job monitor thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,203 | INFO     | [payload] control thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-24 23:34:50] 2026-04-25 03:33:55,350 | INFO     | [data] copytool_in thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,781 | INFO     | [job] control thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,878 | INFO     | [payload] execute_payloads thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:55,937 | INFO     | [data] control thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,159 | INFO     | [job] validate thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,529 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,585 | INFO     | [payload] failed_post thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,607 | INFO     | [job] create_data_payload thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,609 | INFO     | [payload] validate_pre thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:56,675 | INFO     | [payload] validate_post thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:57,350 | INFO     | [data] copytool_out thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:33:58,118 | INFO     | [data] queue_monitor thread has finished
[2026-04-24 23:34:50] 2026-04-25 03:34:24,727 | INFO     | PID=29443 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-24 23:34:50] 2026-04-25 03:34:24,728 | INFO     | found 0 job(s) in 20 queues
[2026-04-24 23:34:50] 2026-04-25 03:34:24,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-24 23:34:50] 2026-04-25 03:34:24,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-24 23:34:50] 2026-04-25 03:34:44,794 | INFO     | [monitor] cgroup control has ended
[2026-04-24 23:34:50] 2026-04-25 03:34:44,891 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622005565248)>', '<ExcThread(monitor, started 139621576984320)>']
[2026-04-24 23:34:50] 2026-04-25 03:34:45,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-24 23:34:50] 2026-04-25 03:34:45,833 | INFO     | [monitor] control thread has ended
[2026-04-24 23:34:50] 2026-04-25 03:34:49,917 | INFO     | all workflow threads have been joined
[2026-04-24 23:34:50] 2026-04-25 03:34:49,917 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-24 23:34:50] 2026-04-25 03:34:49,918 | INFO     | traces error code: 0
[2026-04-24 23:34:50] 2026-04-25 03:34:49,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-24 23:34:50] 2026-04-25 03:34:50,029 [wrapper] ==== pilot stdout END ====
[2026-04-24 23:34:50] 2026-04-25 03:34:50,033 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-24 23:34:50] 2026-04-25 03:34:50,038 [wrapper] pilotpid: 29443
[2026-04-24 23:34:50] 2026-04-25 03:34:50,042 [wrapper] Pilot exit status: 0
[2026-04-24 23:34:50] 2026-04-25 03:34:50,061 [wrapper] pandaids: 7098006013
[2026-04-24 23:34:50] 2026-04-25 03:34:50,110 [wrapper] cleanup supervisor_pilot  8022 29444
[2026-04-24 23:34:50] 2026-04-25 03:34:50,115 [wrapper] Test setup, not cleaning
[2026-04-24 23:34:50] 2026-04-25 03:34:50,120 [wrapper] apfmon messages muted
[2026-04-24 23:34:50] 2026-04-25 03:34:50,125 [wrapper] ==== wrapper stdout END ====
[2026-04-24 23:34:50] 2026-04-25 03:34:50,129 [wrapper] ==== wrapper stderr END ====
[2026-04-24 23:34:50]  *** Error codes and diagnostics ***
[2026-04-24 23:34:50]     "exeErrorCode": 0,
[2026-04-24 23:34:50]     "pilotErrorCode": 0,
[2026-04-24 23:34:50]  *** Listing of results directory ***
[2026-04-24 23:34:50] total 456452
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-24 23:34:50] -rwx------ 1 boincer umatlas     36322 Apr 18 05:22 runpilot2-wrapper.sh
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 05:42 queuedata.json
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas       100 Apr 24 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-24 23:34:50] -rwxr-xr-x 1 boincer umatlas      7986 Apr 24 21:39 run_atlas
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas       105 Apr 24 21:39 job.xml
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas 277399123 Apr 24 21:39 EVNT.49539591._000519.pool.root.1
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas     15665 Apr 24 21:39 start_atlas.sh
[2026-04-24 23:34:50] drwxrwx--x 2 boincer umatlas      4096 Apr 24 21:39 shared
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas    656945 Apr 24 21:39 input.tar.gz
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas         0 Apr 24 21:39 boinc_lockfile
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas      2606 Apr 24 21:39 pandaJob.out
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas        57 Apr 24 21:39 setup.sh.local
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas    997218 Apr 24 21:39 agis_schedconf.cvmfs.json
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas   1509089 Apr 24 21:39 agis_ddmendpoints.agis.ALL.json
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas       431 Apr 24 21:39 workernode_map.json
[2026-04-24 23:34:50] drwx------ 5 boincer umatlas      4096 Apr 24 21:39 pilot3
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas      5823 Apr 24 23:31 init_data.xml
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas 184001576 Apr 24 23:33 HITS.49545114._030665.pool.root.1
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas       487 Apr 24 23:33 boinc_task_state.xml
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas      1049 Apr 24 23:33 memory_monitor_summary.json
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas    329879 Apr 24 23:33 log.49545114._030665.job.log.tgz.1
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas      6420 Apr 24 23:33 heartbeat_new.json
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas      6311 Apr 24 23:33 heartbeat.json
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas        95 Apr 24 23:34 pilot_heartbeat.json
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas      8192 Apr 24 23:34 boinc_mmap_file
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas        27 Apr 24 23:34 wrapper_checkpoint.txt
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas      4741 Apr 24 23:34 pilotlog.txt
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas    641907 Apr 24 23:34 log.49545114._030665.job.log.1
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas       357 Apr 24 23:34 output.list
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas       410 Apr 24 23:34 runtime_log
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas    993280 Apr 24 23:34 result.tar.gz
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas      8958 Apr 24 23:34 runtime_log.err
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas       659 Apr 24 23:34 4d3ef1ac8098.diag
[2026-04-24 23:34:50] -rw-r--r-- 1 boincer umatlas     21175 Apr 24 23:34 stderr.txt
[2026-04-24 23:34:50] HITS file was successfully produced:
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas 184001576 Apr 24 23:33 shared/HITS.pool.root.1
[2026-04-24 23:34:50]  *** Contents of shared directory: ***
[2026-04-24 23:34:50] total 452228
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas 277399123 Apr 24 21:39 ATLAS.root_0
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas     15665 Apr 24 21:39 start_atlas.sh
[2026-04-24 23:34:50] -rw-r--r-- 2 boincer umatlas    656945 Apr 24 21:39 input.tar.gz
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas 184001576 Apr 24 23:33 HITS.pool.root.1
[2026-04-24 23:34:50] -rw------- 1 boincer umatlas    993280 Apr 24 23:34 result.tar.gz
23:34:51 (25749): run_atlas exited; CPU time 50065.901050
23:34:51 (25749): called boinc_finish(0)

</stderr_txt>
]]>

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