Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:29:58 (29524): wrapper (7.7.26015): starting
21:29:58 (29524): wrapper: running run_atlas (--nthreads 12)
[2026-04-24 21:29:58] Arguments: --nthreads 12
[2026-04-24 21:29:58] Threads: 12
[2026-04-24 21:29:58] Checking for CVMFS
[2026-04-24 21:29:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-24 21:29:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-24 21:29:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-24 21:29:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-24 21:29:59] 2.11.2.0 6893 332937 93376 158831 3 1 13009567 20275200 1 130560 0 129214689 99.931 17001025 29846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-24 21:29:59] CVMFS is ok
[2026-04-24 21:29:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 21:29:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 21:29:59] Further information can be found at the LHC@home message board.
[2026-04-24 21:29:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 21:29:59] Checking for apptainer binary...
[2026-04-24 21:29:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-24 21:29:59] Running /usr/bin/apptainer --version
[2026-04-24 21:29:59] apptainer version 1.3.2-1.el7
[2026-04-24 21:29:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 21:30:01] c-205-3.aglt2.org
[2026-04-24 21:30:01] apptainer works
[2026-04-24 21:30:01] Set ATHENA_PROC_NUMBER=12
[2026-04-24 21:30:01] Set ATHENA_CORE_NUMBER=12
[2026-04-24 21:30:01] Starting ATLAS job with PandaID=7098006054
[2026-04-24 21:30:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-24 22:44:39]  *** The last 200 lines of the pilot log: ***
[2026-04-24 22:44:39]  lfn=log.49545114._030706.job.log.tgz.1
[2026-04-24 22:44:39]  mtime=0
[2026-04-24 22:44:39]  protocol_id=None
[2026-04-24 22:44:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-24 22:44:39]  replicas=None
[2026-04-24 22:44:39]  scope=mc23_13p6TeV
[2026-04-24 22:44:39]  status=None
[2026-04-24 22:44:39]  status_code=0
[2026-04-24 22:44:39]  storage_token=
[2026-04-24 22:44:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7098006054/log.49545114._030706.job.log.tgz.1
[2026-04-24 22:44:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/6a/log.49545114._030706.job.log.tgz.1
[2026-04-24 22:44:39]  workdir=None
[2026-04-24 22:44:39] ]
[2026-04-24 22:44:39] 2026-04-25 02:44:06,189 | INFO     | transferring file log.49545114._030706.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7098006054/log.49545114._030706.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-24 22:44:39] 2026-04-25 02:44:06,189 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7098006054/log.49545114._030706.job.log.tgz.1 /tmp/boinchome/slots/0/log.49545114._030706.job
[2026-04-24 22:44:39] 2026-04-25 02:44:06,211 | INFO     | adding to output.list: log.49545114._030706.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/6a/log.49545114._030706.job.log.tg
[2026-04-24 22:44:39] 2026-04-25 02:44:06,212 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-24 22:44:39] 2026-04-25 02:44:06,212 | INFO     | summary of transferred files:
[2026-04-24 22:44:39] 2026-04-25 02:44:06,212 | INFO     |  -- lfn=log.49545114._030706.job.log.tgz.1, status_code=0, status=transferred
[2026-04-24 22:44:39] 2026-04-25 02:44:06,213 | INFO     | stage-out finished correctly
[2026-04-24 22:44:39] 2026-04-25 02:44:06,991 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-24 22:44:39] 2026-04-25 02:44:07,335 | INFO     | job 7098006054 has state=finished
[2026-04-24 22:44:39] 2026-04-25 02:44:07,335 | INFO     | preparing for final server update for job 7098006054 in state='finished'
[2026-04-24 22:44:39] 2026-04-25 02:44:07,335 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7098006054/jobReport.json
[2026-04-24 22:44:39] 2026-04-25 02:44:07,338 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-24 22:44:39] 2026-04-25 02:44:07,339 | INFO     | this job has now completed (state=finished)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,339 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,339 | INFO     | log transfer has been attempted: DONE
[2026-04-24 22:44:39] 2026-04-25 02:44:07,339 | INFO     | job 7098006054 has finished - writing final server update
[2026-04-24 22:44:39] 2026-04-25 02:44:07,340 | INFO     | total number of processed events: 400 (read)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,342 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7098006054/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,343 | INFO     | extracted standard info from prmon json
[2026-04-24 22:44:39] 2026-04-25 02:44:07,343 | INFO     | extracted standard memory fields from prmon json
[2026-04-24 22:44:39] 2026-04-25 02:44:07,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-24 22:44:39] 2026-04-25 02:44:07,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-24 22:44:39] 2026-04-25 02:44:07,344 | INFO     | fitting pss+swap vs Time
[2026-04-24 22:44:39] 2026-04-25 02:44:07,345 | INFO     | sum of square deviations: 85136480.0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,345 | INFO     | sum of deviations: -5927955600.0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,345 | INFO     | mean x (centered): 0.0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,345 | INFO     | mean y: 2833089.707692308
[2026-04-24 22:44:39] 2026-04-25 02:44:07,345 | INFO     | intersect: 2833089.707692308
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | chi2: 0.12768578898806562
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | current memory leak: -69.63 B/s (using 65 data points, chi2=0.13)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | ..............................
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | . Timing measurements:
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | . get job = 0 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | . initial setup = 7 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,346 | INFO     | . payload setup = 15 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,347 | INFO     | . stage-in = 0 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,347 | INFO     | . payload execution = 4389 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,347 | INFO     | . stage-out = 0 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,347 | INFO     | . log creation = 0 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,347 | INFO     | ..............................
[2026-04-24 22:44:39] 2026-04-25 02:44:07,425 | INFO     | 
[2026-04-24 22:44:39] 2026-04-25 02:44:07,425 | INFO     | job summary report
[2026-04-24 22:44:39] 2026-04-25 02:44:07,425 | INFO     | --------------------------------------------------
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | PanDA job id: 7098006054
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | task id: 49545114
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | errors: (none)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | pilot state: finished 
[2026-04-24 22:44:39] 2026-04-25 02:44:07,426 | INFO     | transexitcode: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | exeerrorcode: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | exeerrordiag: 
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | exitcode: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | exitmsg: OK
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | cpuconsumptiontime: 47076 s
[2026-04-24 22:44:39] 2026-04-25 02:44:07,427 | INFO     | nevents: 400
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | neventsw: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | pid: 5885
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | pgrp: 5885
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | corecount: 12
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | event service: False
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | sizes: {0: 2274652, 1: 2276481, 11: 2276481, 4408: 2302611, 4409: 2302610, 4410: 2311664, 4411: 2311848, 4412: 2312042}
[2026-04-24 22:44:39] 2026-04-25 02:44:07,428 | INFO     | --------------------------------------------------
[2026-04-24 22:44:39] 2026-04-25 02:44:07,429 | INFO     | 
[2026-04-24 22:44:39] 2026-04-25 02:44:07,429 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-24 22:44:39] 2026-04-25 02:44:07,452 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,452 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,452 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,452 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,455 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,455 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-24 22:44:39] 2026-04-25 02:44:07,455 | INFO     | job 7098006054 has completed (purged errors)
[2026-04-24 22:44:39] 2026-04-25 02:44:07,455 | INFO     | overall cleanup function is called
[2026-04-24 22:44:39] 2026-04-25 02:44:08,463 | INFO     | --- collectZombieJob: --- 10, [5885]
[2026-04-24 22:44:39] 2026-04-25 02:44:08,463 | INFO     | zombie collector waiting for pid 5885
[2026-04-24 22:44:39] 2026-04-25 02:44:08,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-24 22:44:39] 2026-04-25 02:44:08,464 | INFO     | collected zombie processes
[2026-04-24 22:44:39] 2026-04-25 02:44:08,464 | INFO     | will attempt to kill all subprocesses of pid=5885
[2026-04-24 22:44:39] 2026-04-25 02:44:08,552 | INFO     | process IDs to be killed: [5885] (in reverse order)
[2026-04-24 22:44:39] 2026-04-25 02:44:08,603 | WARNING  | found no corresponding commands to process id(s)
[2026-04-24 22:44:39] 2026-04-25 02:44:08,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-24 22:44:39] 2026-04-25 02:44:08,606 | INFO     | did not find any defunct processes belonging to 5885
[2026-04-24 22:44:39] 2026-04-25 02:44:08,609 | INFO     | did not find any defunct processes belonging to 5885
[2026-04-24 22:44:39] 2026-04-25 02:44:08,609 | INFO     | Ready for new job
[2026-04-24 22:44:39] 2026-04-25 02:44:08,610 | INFO     | **************************************
[2026-04-24 22:44:39] 2026-04-25 02:44:08,610 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-24 22:44:39] 2026-04-25 02:44:08,611 | INFO     | **************************************
[2026-04-24 22:44:39] 2026-04-25 02:44:08,611 | INFO     | 
[2026-04-24 22:44:39] 2026-04-25 02:44:08,611 | INFO     | architecture information:
[2026-04-24 22:44:39] 2026-04-25 02:44:08,612 | INFO     | executing command: cat /etc/os-release
[2026-04-24 22:44:39] 2026-04-25 02:44:08,627 | INFO     | cat /etc/os-release:
[2026-04-24 22:44:39] NAME="CentOS Linux"
[2026-04-24 22:44:39] VERSION="7 (Core)"
[2026-04-24 22:44:39] ID="centos"
[2026-04-24 22:44:39] ID_LIKE="rhel fedora"
[2026-04-24 22:44:39] VERSION_ID="7"
[2026-04-24 22:44:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-24 22:44:39] ANSI_COLOR="0;31"
[2026-04-24 22:44:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-24 22:44:39] HOME_URL="https://www.centos.org/"
[2026-04-24 22:44:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-24 22:44:39] 
[2026-04-24 22:44:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-24 22:44:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-24 22:44:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-24 22:44:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-24 22:44:39] 
[2026-04-24 22:44:39] 2026-04-25 02:44:08,627 | INFO     | **************************************
[2026-04-24 22:44:39] 2026-04-25 02:44:09,130 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-24 22:44:39] 2026-04-25 02:44:09,146 | INFO     | sufficient remaining disk space (29333913600 B)
[2026-04-24 22:44:39] 2026-04-25 02:44:09,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-24 22:44:39] 2026-04-25 02:44:09,147 | INFO     | current server update state: UPDATING_FINAL
[2026-04-24 22:44:39] 2026-04-25 02:44:09,147 | INFO     | update_server=False
[2026-04-24 22:44:39] 2026-04-25 02:44:09,147 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-24 22:44:39] 2026-04-25 02:44:09,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-24 22:44:39] 2026-04-25 02:44:09,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-24 22:44:39] 2026-04-25 02:44:09,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-24 22:44:39] 2026-04-25 02:44:09,465 | INFO     | all job control threads have been joined
[2026-04-24 22:44:39] 2026-04-25 02:44:09,477 | WARNING  | process 5885 can no longer be monitored (due to stat problems) - aborting
[2026-04-24 22:44:39] 2026-04-25 02:44:09,548 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 22:44:39] 2026-04-25 02:44:09,548 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 22:44:39] 2026-04-25 02:44:09,549 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-24 22:44:39] 2026-04-25 02:44:09,549 | WARNING  | maxPSS not found in memory monitor output
[2026-04-24 22:44:39] 2026-04-25 02:44:09,549 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7098006054/payload.stdout) since it has not been created yet
[2026-04-24 22:44:39] 2026-04-25 02:44:09,549 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-24 22:44:39] 2026-04-25 02:44:09,564 | INFO     | sufficient remaining disk space (29333913600 B)
[2026-04-24 22:44:39] 2026-04-25 02:44:09,565 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-24 22:44:39] 2026-04-25 02:44:09,565 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7098006054/HITS.49545114._030706.pool.root.1 since it does not exist
[2026-04-24 22:44:39] 2026-04-25 02:44:09,653 | INFO     | number of running child processes to parent process 5885: 1
[2026-04-24 22:44:39] 2026-04-25 02:44:09,653 | INFO     | maximum number of monitored processes: 6
[2026-04-24 22:44:39] 2026-04-25 02:44:09,654 | INFO     | aborting job monitoring since job object (job id=7098006054) has expired
[2026-04-24 22:44:39] 2026-04-25 02:44:09,654 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-24 22:44:39] 2026-04-25 02:44:09,654 | INFO     | will abort loop
[2026-04-24 22:44:39] 2026-04-25 02:44:09,795 | INFO     | all data control threads have been joined
[2026-04-24 22:44:39] 2026-04-25 02:44:09,978 | INFO     | all payload control threads have been joined
[2026-04-24 22:44:39] 2026-04-25 02:44:10,153 | INFO     | [job] retrieve thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,153 | INFO     | [job] queue monitor thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,293 | INFO     | [payload] validate_post thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,470 | INFO     | [job] control thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,482 | INFO     | [data] copytool_in thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,659 | INFO     | [job] job monitor thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,800 | INFO     | [data] control thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,880 | INFO     | [payload] failed_post thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:10,983 | INFO     | [payload] control thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,251 | INFO     | [job] validate thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,306 | INFO     | [data] copytool_out thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,392 | INFO     | [job] create_data_payload thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,411 | INFO     | [payload] execute_payloads thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,452 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:11,543 | INFO     | [payload] validate_pre thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:13,153 | INFO     | [data] queue_monitor thread has finished
[2026-04-24 22:44:39] 2026-04-25 02:44:31,439 | INFO     | [monitor] cgroup control has ended
[2026-04-24 22:44:39] 2026-04-25 02:44:33,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712597686080)>', '<ExcThread(monitor, started 139711762904832)>']
[2026-04-24 22:44:39] 2026-04-25 02:44:38,228 | INFO     | all workflow threads have been joined
[2026-04-24 22:44:39] 2026-04-25 02:44:38,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-24 22:44:39] 2026-04-25 02:44:38,228 | INFO     | traces error code: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:38,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-24 22:44:39] 2026-04-25 02:44:38,864 | INFO     | PID=1337 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-04-24 22:44:39] 2026-04-25 02:44:38,865 | INFO     | found 0 job(s) in 20 queues
[2026-04-24 22:44:39] 2026-04-25 02:44:38,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-24 22:44:39] 2026-04-25 02:44:38,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-24 22:44:39] 2026-04-25 02:44:38,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-24 22:44:39] 2026-04-25 02:44:38,865 | INFO     | [monitor] control thread has ended
[2026-04-24 22:44:39] 2026-04-25 02:44:38,945 [wrapper] ==== pilot stdout END ====
[2026-04-24 22:44:39] 2026-04-25 02:44:38,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-24 22:44:39] 2026-04-25 02:44:38,952 [wrapper] pilotpid: 1337
[2026-04-24 22:44:39] 2026-04-25 02:44:38,956 [wrapper] Pilot exit status: 0
[2026-04-24 22:44:39] 2026-04-25 02:44:38,973 [wrapper] pandaids: 7098006054
[2026-04-24 22:44:39] 2026-04-25 02:44:39,010 [wrapper] cleanup supervisor_pilot 23950 1338
[2026-04-24 22:44:39] 2026-04-25 02:44:39,014 [wrapper] Test setup, not cleaning
[2026-04-24 22:44:39] 2026-04-25 02:44:39,018 [wrapper] apfmon messages muted
[2026-04-24 22:44:39] 2026-04-25 02:44:39,022 [wrapper] ==== wrapper stdout END ====
[2026-04-24 22:44:39] 2026-04-25 02:44:39,026 [wrapper] ==== wrapper stderr END ====
[2026-04-24 22:44:39]  *** Error codes and diagnostics ***
[2026-04-24 22:44:39]     "exeErrorCode": 0,
[2026-04-24 22:44:39]     "pilotErrorCode": 0,
[2026-04-24 22:44:39]  *** Listing of results directory ***
[2026-04-24 22:44:39] total 464280
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-24 22:44:39] -rwx------ 1 boincer umatlas     36322 Apr 18 05:22 runpilot2-wrapper.sh
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 05:42 queuedata.json
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas       100 Apr 24 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-24 22:44:39] -rwxr-xr-x 1 boincer umatlas      7986 Apr 24 21:29 run_atlas
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas       105 Apr 24 21:29 job.xml
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas 281529476 Apr 24 21:29 EVNT.49539591._000522.pool.root.1
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas     15665 Apr 24 21:29 start_atlas.sh
[2026-04-24 22:44:39] drwxrwx--x 2 boincer umatlas      4096 Apr 24 21:29 shared
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas    656939 Apr 24 21:29 input.tar.gz
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas         0 Apr 24 21:29 boinc_lockfile
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas      2606 Apr 24 21:30 pandaJob.out
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas        57 Apr 24 21:30 setup.sh.local
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas    997218 Apr 24 21:30 agis_schedconf.cvmfs.json
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas   1509089 Apr 24 21:30 agis_ddmendpoints.agis.ALL.json
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas       444 Apr 24 21:30 workernode_map.json
[2026-04-24 22:44:39] drwx------ 5 boincer umatlas      4096 Apr 24 21:30 pilot3
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas      5867 Apr 24 22:39 init_data.xml
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas 188259675 Apr 24 22:43 HITS.49545114._030706.pool.root.1
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas       487 Apr 24 22:43 boinc_task_state.xml
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas      1045 Apr 24 22:44 memory_monitor_summary.json
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas    357608 Apr 24 22:44 log.49545114._030706.job.log.tgz.1
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas      6437 Apr 24 22:44 heartbeat_new.json
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas      6328 Apr 24 22:44 heartbeat.json
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas      8192 Apr 24 22:44 boinc_mmap_file
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas        27 Apr 24 22:44 wrapper_checkpoint.txt
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas       744 Apr 24 22:44 pilotlog.txt
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas        95 Apr 24 22:44 pilot_heartbeat.json
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas    431363 Apr 24 22:44 log.49545114._030706.job.log.1
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas       357 Apr 24 22:44 output.list
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas       410 Apr 24 22:44 runtime_log
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas    808960 Apr 24 22:44 result.tar.gz
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas      8960 Apr 24 22:44 runtime_log.err
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas       658 Apr 24 22:44 4d3e8ceaaaa4.diag
[2026-04-24 22:44:39] -rw-r--r-- 1 boincer umatlas     21763 Apr 24 22:44 stderr.txt
[2026-04-24 22:44:39] HITS file was successfully produced:
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas 188259675 Apr 24 22:43 shared/HITS.pool.root.1
[2026-04-24 22:44:39]  *** Contents of shared directory: ***
[2026-04-24 22:44:39] total 460236
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas 281529476 Apr 24 21:29 ATLAS.root_0
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas     15665 Apr 24 21:29 start_atlas.sh
[2026-04-24 22:44:39] -rw-r--r-- 2 boincer umatlas    656939 Apr 24 21:29 input.tar.gz
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas 188259675 Apr 24 22:43 HITS.pool.root.1
[2026-04-24 22:44:39] -rw------- 1 boincer umatlas    808960 Apr 24 22:44 result.tar.gz
22:44:40 (29524): run_atlas exited; CPU time 47059.359099
22:44:40 (29524): called boinc_finish(0)

</stderr_txt>
]]>

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