Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:30:10 (2008239): wrapper (7.7.26015): starting
21:30:10 (2008239): wrapper: running run_atlas (--nthreads 8)
[2026-04-24 21:30:10] Arguments: --nthreads 8
[2026-04-24 21:30:10] Threads: 8
[2026-04-24 21:30:10] Checking for CVMFS
[2026-04-24 21:30:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-24 21:30:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-24 21:30:12] Running cvmfs_config stat atlas.cern.ch
[2026-04-24 21:30:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-24 21:30:14] 2.13.3.0 7410 245347 737884 158831 3 377 15331449 25181185 15907 16776704 0 1138510263 99.570 1286007154 28242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-24 21:30:14] CVMFS is ok
[2026-04-24 21:30:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 21:30:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 21:30:14] Further information can be found at the LHC@home message board.
[2026-04-24 21:30:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 21:30:14] Checking for apptainer binary...
[2026-04-24 21:30:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-24 21:30:14] Running /usr/bin/apptainer --version
[2026-04-24 21:30:14] apptainer version 1.4.5-2.el9
[2026-04-24 21:30:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 21:30:14] c-16-37.aglt2.org
[2026-04-24 21:30:14] apptainer works
[2026-04-24 21:30:14] Set ATHENA_PROC_NUMBER=8
[2026-04-24 21:30:14] Set ATHENA_CORE_NUMBER=8
[2026-04-24 21:30:15] Starting ATLAS job with PandaID=7101159666
[2026-04-24 21:30:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 02:35:50]  *** The last 200 lines of the pilot log: ***
[2026-04-25 02:35:50] 2026-04-25 06:34:52,021 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7101159666/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 02:35:50] 2026-04-25 06:34:52,600 | INFO     | number of running child processes to parent process 2040417: 1
[2026-04-25 02:35:50] 2026-04-25 06:34:52,600 | INFO     | maximum number of monitored processes: 6
[2026-04-25 02:35:50] 2026-04-25 06:34:53,380 | INFO     | job 7101159666 has state=finished
[2026-04-25 02:35:50] 2026-04-25 06:34:53,381 | INFO     | preparing for final server update for job 7101159666 in state='finished'
[2026-04-25 02:35:50] 2026-04-25 06:34:53,541 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,541 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7101159666/jobReport.json
[2026-04-25 02:35:50] 2026-04-25 06:34:53,545 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-25 02:35:50] 2026-04-25 06:34:53,546 | INFO     | this job has now completed (state=finished)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,546 | INFO     | log transfer has been attempted: DONE
[2026-04-25 02:35:50] 2026-04-25 06:34:53,547 | INFO     | job 7101159666 has finished - writing final server update
[2026-04-25 02:35:50] 2026-04-25 06:34:53,547 | INFO     | total number of processed events: 400 (read)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,563 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7101159666/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,564 | INFO     | extracted standard info from prmon json
[2026-04-25 02:35:50] 2026-04-25 06:34:53,564 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 02:35:50] 2026-04-25 06:34:53,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 02:35:50] 2026-04-25 06:34:53,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 02:35:50] 2026-04-25 06:34:53,572 | INFO     | fitting pss+swap vs Time
[2026-04-25 02:35:50] 2026-04-25 06:34:53,573 | INFO     | sum of square deviations: 8041863563.837838
[2026-04-25 02:35:50] 2026-04-25 06:34:53,576 | INFO     | sum of deviations: 111839200792.35132
[2026-04-25 02:35:50] 2026-04-25 06:34:53,577 | INFO     | mean x (centered): 0.0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,577 | INFO     | mean y: 2470438.560810811
[2026-04-25 02:35:50] 2026-04-25 06:34:53,577 | INFO     | intersect: 2470438.560810811
[2026-04-25 02:35:50] 2026-04-25 06:34:53,578 | INFO     | chi2: 3.3746576137101267
[2026-04-25 02:35:50] 2026-04-25 06:34:53,579 | INFO     | sum of square deviations: 7641168836.439887
[2026-04-25 02:35:50] 2026-04-25 06:34:53,581 | INFO     | sum of deviations: 128068053922.99301
[2026-04-25 02:35:50] 2026-04-25 06:34:53,581 | INFO     | mean x (centered): 0.0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,582 | INFO     | mean y: 2476517.965635739
[2026-04-25 02:35:50] 2026-04-25 06:34:53,582 | INFO     | intersect: 2476517.965635739
[2026-04-25 02:35:50] 2026-04-25 06:34:53,582 | INFO     | chi2: 2.68982835575973
[2026-04-25 02:35:50] 2026-04-25 06:34:53,583 | INFO     | current chi2=2.68982835575973 (change=20.293295982625324 %)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,583 | INFO     | right removable region: 290
[2026-04-25 02:35:50] 2026-04-25 06:34:53,583 | INFO     | sum of square deviations: 7641167983.628863
[2026-04-25 02:35:50] 2026-04-25 06:34:53,587 | INFO     | sum of deviations: 36057166155.319626
[2026-04-25 02:35:50] 2026-04-25 06:34:53,588 | INFO     | mean x (centered): 0.0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,588 | INFO     | mean y: 2499198.711340206
[2026-04-25 02:35:50] 2026-04-25 06:34:53,588 | INFO     | intersect: 2499198.711340206
[2026-04-25 02:35:50] 2026-04-25 06:34:53,589 | INFO     | chi2: 0.8265067991908667
[2026-04-25 02:35:50] 2026-04-25 06:34:53,589 | INFO     | current chi2=0.8265067991908667 (change=75.50842503746038 %)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,590 | INFO     | sum of square deviations: 7254042675.737728
[2026-04-25 02:35:50] 2026-04-25 06:34:53,593 | INFO     | sum of deviations: 21426566118.69581
[2026-04-25 02:35:50] 2026-04-25 06:34:53,593 | INFO     | mean x (centered): 0.0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,593 | INFO     | mean y: 2504953.255244755
[2026-04-25 02:35:50] 2026-04-25 06:34:53,594 | INFO     | intersect: 2504953.255244755
[2026-04-25 02:35:50] 2026-04-25 06:34:53,595 | INFO     | chi2: 0.7551519472464433
[2026-04-25 02:35:50] 2026-04-25 06:34:53,595 | INFO     | current chi2=0.7551519472464433 (change=8.633304894076893 %)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,595 | INFO     | left removable region: 10
[2026-04-25 02:35:50] 2026-04-25 06:34:53,595 | INFO     | sum of square deviations: 6806997616.800032
[2026-04-25 02:35:50] 2026-04-25 06:34:53,610 | INFO     | sum of deviations: 38393060366.4
[2026-04-25 02:35:50] 2026-04-25 06:34:53,611 | INFO     | mean x (centered): 0.0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,611 | INFO     | mean y: 2511768.064285714
[2026-04-25 02:35:50] 2026-04-25 06:34:53,611 | INFO     | intersect: 2511768.064285714
[2026-04-25 02:35:50] 2026-04-25 06:34:53,611 | INFO     | chi2: 0.05174529364860956
[2026-04-25 02:35:50] 2026-04-25 06:34:53,612 | INFO     | current memory leak: 5.64 B/s (using 280 data points, chi2=0.05)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,612 | INFO     | could have reported an average CPU frequency of 2651 MHz (14 samples)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | ..............................
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . Timing measurements:
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . get job = 0 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . initial setup = 37 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . payload setup = 90 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . stage-in = 0 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,613 | INFO     | . payload execution = 18048 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,614 | INFO     | . stage-out = 6 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,614 | INFO     | . log creation = 0 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,614 | INFO     | ..............................
[2026-04-25 02:35:50] 2026-04-25 06:34:53,796 | INFO     | 
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | job summary report
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | --------------------------------------------------
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | PanDA job id: 7101159666
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | task id: 49263191
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | errors: (none)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | pilot state: finished 
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | transexitcode: 0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | exeerrorcode: 0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | exeerrordiag: 
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | exitcode: 0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | exitmsg: OK
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | cpuconsumptiontime: 54881 s
[2026-04-25 02:35:50] 2026-04-25 06:34:53,798 | INFO     | nevents: 400
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | neventsw: 0
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | pid: 2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | pgrp: 2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | corecount: 8
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | event service: False
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | sizes: {0: 2274613, 1: 2274698, 2: 2276442, 13: 2276470, 18143: 2308743, 18144: 2308742, 18151: 2317980, 18153: 2318118}
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | --------------------------------------------------
[2026-04-25 02:35:50] 2026-04-25 06:34:53,799 | INFO     | 
[2026-04-25 02:35:50] 2026-04-25 06:34:53,800 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-25 02:35:50] 2026-04-25 06:34:53,865 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,866 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,867 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,868 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,868 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,868 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,868 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,868 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 02:35:50] 2026-04-25 06:34:53,900 | INFO     | job 7101159666 has completed (purged errors)
[2026-04-25 02:35:50] 2026-04-25 06:34:53,900 | INFO     | overall cleanup function is called
[2026-04-25 02:35:50] 2026-04-25 06:34:54,910 | INFO     | --- collectZombieJob: --- 10, [2040417]
[2026-04-25 02:35:50] 2026-04-25 06:34:54,911 | INFO     | zombie collector waiting for pid 2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:54,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 02:35:50] 2026-04-25 06:34:54,911 | INFO     | collected zombie processes
[2026-04-25 02:35:50] 2026-04-25 06:34:54,911 | INFO     | will attempt to kill all subprocesses of pid=2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:55,870 | INFO     | process IDs to be killed: [2040417] (in reverse order)
[2026-04-25 02:35:50] 2026-04-25 06:34:56,080 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 02:35:50] 2026-04-25 06:34:56,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 02:35:50] 2026-04-25 06:34:56,094 | INFO     | did not find any defunct processes belonging to 2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:56,109 | INFO     | did not find any defunct processes belonging to 2040417
[2026-04-25 02:35:50] 2026-04-25 06:34:56,110 | INFO     | Ready for new job
[2026-04-25 02:35:50] 2026-04-25 06:34:56,113 | INFO     | ***************************************
[2026-04-25 02:35:50] 2026-04-25 06:34:56,113 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 02:35:50] 2026-04-25 06:34:56,113 | INFO     | ***************************************
[2026-04-25 02:35:50] 2026-04-25 06:34:56,114 | INFO     | 
[2026-04-25 02:35:50] 2026-04-25 06:34:56,139 | INFO     | architecture information:
[2026-04-25 02:35:50] 2026-04-25 06:34:56,170 | INFO     | executing command: cat /etc/os-release
[2026-04-25 02:35:50] 2026-04-25 06:34:56,306 | INFO     | cat /etc/os-release:
[2026-04-25 02:35:50] NAME="CentOS Linux"
[2026-04-25 02:35:50] VERSION="7 (Core)"
[2026-04-25 02:35:50] ID="centos"
[2026-04-25 02:35:50] ID_LIKE="rhel fedora"
[2026-04-25 02:35:50] VERSION_ID="7"
[2026-04-25 02:35:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 02:35:50] ANSI_COLOR="0;31"
[2026-04-25 02:35:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 02:35:50] HOME_URL="https://www.centos.org/"
[2026-04-25 02:35:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 02:35:50] 
[2026-04-25 02:35:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 02:35:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 02:35:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 02:35:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 02:35:50] 
[2026-04-25 02:35:50] 2026-04-25 06:34:56,307 | INFO     | ***************************************
[2026-04-25 02:35:50] 2026-04-25 06:34:56,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-25 02:35:50] 2026-04-25 06:34:56,926 | INFO     | sufficient remaining disk space (63967330304 B)
[2026-04-25 02:35:50] 2026-04-25 06:34:56,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 02:35:50] 2026-04-25 06:34:56,927 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 02:35:50] 2026-04-25 06:34:56,927 | INFO     | update_server=False
[2026-04-25 02:35:50] 2026-04-25 06:34:56,927 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 02:35:50] 2026-04-25 06:34:56,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 02:35:50] 2026-04-25 06:34:56,943 | INFO     | aborting loop
[2026-04-25 02:35:50] 2026-04-25 06:34:57,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 02:35:50] 2026-04-25 06:34:57,866 | INFO     | all data control threads have been joined
[2026-04-25 02:35:50] 2026-04-25 06:34:57,933 | INFO     | [job] retrieve thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:57,949 | INFO     | [job] job monitor thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,017 | INFO     | [data] copytool_in thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,023 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,047 | INFO     | all job control threads have been joined
[2026-04-25 02:35:50] 2026-04-25 06:34:58,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 02:35:50] 2026-04-25 06:34:58,160 | INFO     | all payload control threads have been joined
[2026-04-25 02:35:50] 2026-04-25 06:34:58,474 | INFO     | [payload] failed_post thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,489 | INFO     | [payload] validate_post thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,497 | INFO     | [job] validate thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,561 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:58,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 02:35:50] 2026-04-25 06:34:58,873 | INFO     | [data] control thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,084 | INFO     | [job] control thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,167 | INFO     | [payload] control thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,169 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,313 | INFO     | [data] copytool_out thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,426 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:34:59,819 | INFO     | [job] queue monitor thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:35:02,107 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 02:35:50] 2026-04-25 06:35:27,616 | INFO     | PID=2026874 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 02:35:50] 2026-04-25 06:35:27,616 | INFO     | .. there are 22 such processes running
[2026-04-25 02:35:50] 2026-04-25 06:35:27,616 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 02:35:50] 2026-04-25 06:35:27,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 02:35:50] 2026-04-25 06:35:27,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 02:35:50] 2026-04-25 06:35:41,783 | INFO     | [monitor] cgroup control has ended
[2026-04-25 02:35:50] 2026-04-25 06:35:42,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643961489216)>', '<ExcThread(monitor, started 139642724669184)>']
[2026-04-25 02:35:50] 2026-04-25 06:35:43,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 02:35:50] 2026-04-25 06:35:43,818 | INFO     | [monitor] control thread has ended
[2026-04-25 02:35:50] 2026-04-25 06:35:47,930 | INFO     | all workflow threads have been joined
[2026-04-25 02:35:50] 2026-04-25 06:35:47,951 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 02:35:50] 2026-04-25 06:35:47,951 | INFO     | traces error code: 0
[2026-04-25 02:35:50] 2026-04-25 06:35:47,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 02:35:50] 2026-04-25 06:35:49,961 [wrapper] ==== pilot stdout END ====
[2026-04-25 02:35:50] 2026-04-25 06:35:49,990 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 02:35:50] 2026-04-25 06:35:50,020 [wrapper] pilotpid: 2026874
[2026-04-25 02:35:50] 2026-04-25 06:35:50,065 [wrapper] Pilot exit status: 0
[2026-04-25 02:35:50] 2026-04-25 06:35:50,215 [wrapper] pandaids: 7101159666
[2026-04-25 02:35:50] 2026-04-25 06:35:50,748 [wrapper] cleanup supervisor_pilot 2909455 2026875
[2026-04-25 02:35:50] 2026-04-25 06:35:50,751 [wrapper] Test setup, not cleaning
[2026-04-25 02:35:50] 2026-04-25 06:35:50,754 [wrapper] apfmon messages muted
[2026-04-25 02:35:50] 2026-04-25 06:35:50,757 [wrapper] ==== wrapper stdout END ====
[2026-04-25 02:35:50] 2026-04-25 06:35:50,761 [wrapper] ==== wrapper stderr END ====
[2026-04-25 02:35:50]  *** Error codes and diagnostics ***
[2026-04-25 02:35:50]     "exeErrorCode": 0,
[2026-04-25 02:35:50]     "pilotErrorCode": 0,
[2026-04-25 02:35:50]  *** Listing of results directory ***
[2026-04-25 02:35:50] total 418484
[2026-04-25 02:35:50] -rwx------. 1 boincer umatlas     36322 Apr 23 07:23 runpilot2-wrapper.sh
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas      5631 Apr 24 13:22 queuedata.json
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas    683926 Apr 24 13:22 pilot3.tar.gz
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas       100 Apr 24 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 02:35:50] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 24 21:30 run_atlas
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas       105 Apr 24 21:30 job.xml
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas 221957990 Apr 24 21:30 EVNT.49263189._001941.pool.root.1
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas     15667 Apr 24 21:30 start_atlas.sh
[2026-04-25 02:35:50] drwxrwx--x. 2 boincer umatlas      4096 Apr 24 21:30 shared
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas    697426 Apr 24 21:30 input.tar.gz
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas         0 Apr 24 21:30 boinc_lockfile
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas      2578 Apr 24 21:30 pandaJob.out
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas        57 Apr 24 21:30 setup.sh.local
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas    997218 Apr 24 21:31 agis_schedconf.cvmfs.json
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas       440 Apr 24 21:32 workernode_map.json
[2026-04-25 02:35:50] drwx------. 5 boincer umatlas      4096 Apr 24 21:32 pilot3
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas      6528 Apr 25 02:30 init_data.xml
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas 198682807 Apr 25 02:33 HITS.49263191._074290.pool.root.1
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas       488 Apr 25 02:33 boinc_task_state.xml
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas        95 Apr 25 02:34 pilot_heartbeat.json
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas      1044 Apr 25 02:34 memory_monitor_summary.json
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas   1509089 Apr 25 02:34 agis_ddmendpoints.agis.ALL.json
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas    432780 Apr 25 02:34 log.49263191._074290.job.log.tgz.1
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas      6415 Apr 25 02:34 heartbeat_new.json
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas      6306 Apr 25 02:34 heartbeat.json
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas        28 Apr 25 02:35 wrapper_checkpoint.txt
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas      8192 Apr 25 02:35 boinc_mmap_file
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas      4823 Apr 25 02:35 pilotlog.txt
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas   1445860 Apr 25 02:35 log.49263191._074290.job.log.1
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas       357 Apr 25 02:35 output.list
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas       410 Apr 25 02:35 runtime_log
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas   1894400 Apr 25 02:35 result.tar.gz
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas      8960 Apr 25 02:35 runtime_log.err
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas       655 Apr 25 02:35 0141a8caa969.diag
[2026-04-25 02:35:50] -rw-r--r--. 1 boincer umatlas     21264 Apr 25 02:35 stderr.txt
[2026-04-25 02:35:50] HITS file was successfully produced:
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas 198682807 Apr 25 02:33 shared/HITS.pool.root.1
[2026-04-25 02:35:50]  *** Contents of shared directory: ***
[2026-04-25 02:35:50] total 413340
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas 221957990 Apr 24 21:30 ATLAS.root_0
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas     15667 Apr 24 21:30 start_atlas.sh
[2026-04-25 02:35:50] -rw-r--r--. 2 boincer umatlas    697426 Apr 24 21:30 input.tar.gz
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas 198682807 Apr 25 02:33 HITS.pool.root.1
[2026-04-25 02:35:50] -rw-------. 1 boincer umatlas   1894400 Apr 25 02:35 result.tar.gz
02:35:52 (2008239): run_atlas exited; CPU time 55614.320323
02:35:52 (2008239): called boinc_finish(0)

</stderr_txt>
]]>

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