Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:24:45 (853811): wrapper (7.7.26015): starting
13:24:45 (853811): wrapper: running run_atlas (--nthreads 12)
[2026-04-24 13:24:45] Arguments: --nthreads 12
[2026-04-24 13:24:45] Threads: 12
[2026-04-24 13:24:45] Checking for CVMFS
[2026-04-24 13:24:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-24 13:24:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-24 13:24:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-24 13:24:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-24 13:24:47] 2.13.3.0 9105 172872 607044 158817 0 160 28324866 39288832 21063 16776704 0 440645750 99.641 488107580 30683 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-24 13:24:47] CVMFS is ok
[2026-04-24 13:24:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 13:24:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 13:24:47] Further information can be found at the LHC@home message board.
[2026-04-24 13:24:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 13:24:47] Checking for apptainer binary...
[2026-04-24 13:24:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-24 13:24:47] Running /usr/bin/apptainer --version
[2026-04-24 13:24:48] apptainer version 1.4.5-2.el9
[2026-04-24 13:24:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 13:24:49] c-211-21.aglt2.org
[2026-04-24 13:24:49] apptainer works
[2026-04-24 13:24:49] Set ATHENA_PROC_NUMBER=12
[2026-04-24 13:24:49] Set ATHENA_CORE_NUMBER=12
[2026-04-24 13:24:49] Starting ATLAS job with PandaID=7101147378
[2026-04-24 13:24:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-24 21:19:40]  *** The last 200 lines of the pilot log: ***
[2026-04-24 21:19:40] 2026-04-25 01:19:04,643 | INFO     | monitor loop #1487: job 0:7101147378 is in state 'finished'
[2026-04-24 21:19:40] 2026-04-25 01:19:04,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-24 21:19:40] 2026-04-25 01:19:04,646 | INFO     | PID=860586 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-24 21:19:40] 2026-04-25 01:19:04,646 | INFO     | .. there are 28 such processes running
[2026-04-24 21:19:40] 2026-04-25 01:19:05,416 | INFO     | job 7101147378 has state=finished
[2026-04-24 21:19:40] 2026-04-25 01:19:05,416 | INFO     | preparing for final server update for job 7101147378 in state='finished'
[2026-04-24 21:19:40] 2026-04-25 01:19:05,416 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7101147378/jobReport.json
[2026-04-24 21:19:40] 2026-04-25 01:19:05,420 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-24 21:19:40] 2026-04-25 01:19:05,421 | INFO     | this job has now completed (state=finished)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,421 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,421 | INFO     | log transfer has been attempted: DONE
[2026-04-24 21:19:40] 2026-04-25 01:19:05,421 | INFO     | job 7101147378 has finished - writing final server update
[2026-04-24 21:19:40] 2026-04-25 01:19:05,422 | INFO     | total number of processed events: 400 (read)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,430 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7101147378/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,431 | INFO     | extracted standard info from prmon json
[2026-04-24 21:19:40] 2026-04-25 01:19:05,431 | INFO     | extracted standard memory fields from prmon json
[2026-04-24 21:19:40] 2026-04-25 01:19:05,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-24 21:19:40] 2026-04-25 01:19:05,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-24 21:19:40] 2026-04-25 01:19:05,444 | INFO     | fitting pss+swap vs Time
[2026-04-24 21:19:40] 2026-04-25 01:19:05,445 | INFO     | sum of square deviations: 30776299577.870335
[2026-04-24 21:19:40] 2026-04-25 01:19:05,452 | INFO     | sum of deviations: 122984666157.35208
[2026-04-24 21:19:40] 2026-04-25 01:19:05,453 | INFO     | mean x (centered): 0.0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,453 | INFO     | mean y: 2713680.8185745142
[2026-04-24 21:19:40] 2026-04-25 01:19:05,453 | INFO     | intersect: 2713680.8185745142
[2026-04-24 21:19:40] 2026-04-25 01:19:05,454 | INFO     | chi2: 2.5622409149368113
[2026-04-24 21:19:40] 2026-04-25 01:19:05,455 | INFO     | sum of square deviations: 29790025803.763985
[2026-04-24 21:19:40] 2026-04-25 01:19:05,461 | INFO     | sum of deviations: 121824159129.0219
[2026-04-24 21:19:40] 2026-04-25 01:19:05,462 | INFO     | mean x (centered): 0.0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,462 | INFO     | mean y: 2713501.5305676856
[2026-04-24 21:19:40] 2026-04-25 01:19:05,462 | INFO     | intersect: 2713501.5305676856
[2026-04-24 21:19:40] 2026-04-25 01:19:05,463 | INFO     | chi2: 2.5626745459980973
[2026-04-24 21:19:40] 2026-04-25 01:19:05,463 | INFO     | current chi2=2.5626745459980973 (change=-0.016923898871418798 %)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,463 | INFO     | right removable region: 457
[2026-04-24 21:19:40] 2026-04-25 01:19:05,464 | INFO     | sum of square deviations: 29789866593.763996
[2026-04-24 21:19:40] 2026-04-25 01:19:05,470 | INFO     | sum of deviations: 6176634252.838434
[2026-04-24 21:19:40] 2026-04-25 01:19:05,471 | INFO     | mean x (centered): 0.0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,471 | INFO     | mean y: 2731689.4737991267
[2026-04-24 21:19:40] 2026-04-25 01:19:05,471 | INFO     | intersect: 2731689.4737991267
[2026-04-24 21:19:40] 2026-04-25 01:19:05,472 | INFO     | chi2: 0.2582296096304356
[2026-04-24 21:19:40] 2026-04-25 01:19:05,472 | INFO     | current chi2=0.2582296096304356 (change=89.92172796378892 %)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,473 | INFO     | sum of square deviations: 28824764272.772636
[2026-04-24 21:19:40] 2026-04-25 01:19:05,479 | INFO     | sum of deviations: -10132149377.165567
[2026-04-24 21:19:40] 2026-04-25 01:19:05,479 | INFO     | mean x (centered): 0.0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,480 | INFO     | mean y: 2734259.0198675497
[2026-04-24 21:19:40] 2026-04-25 01:19:05,480 | INFO     | intersect: 2734259.0198675497
[2026-04-24 21:19:40] 2026-04-25 01:19:05,481 | INFO     | chi2: 0.20929541120175166
[2026-04-24 21:19:40] 2026-04-25 01:19:05,481 | INFO     | current chi2=0.20929541120175166 (change=18.949878946382626 %)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,481 | INFO     | left removable region: 10
[2026-04-24 21:19:40] 2026-04-25 01:19:05,482 | INFO     | sum of square deviations: 27694563468.930595
[2026-04-24 21:19:40] 2026-04-25 01:19:05,488 | INFO     | sum of deviations: -9903325418.37362
[2026-04-24 21:19:40] 2026-04-25 01:19:05,488 | INFO     | mean x (centered): 0.0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,488 | INFO     | mean y: 2734296.0246085012
[2026-04-24 21:19:40] 2026-04-25 01:19:05,489 | INFO     | intersect: 2734296.0246085012
[2026-04-24 21:19:40] 2026-04-25 01:19:05,489 | INFO     | chi2: 0.20920327614383946
[2026-04-24 21:19:40] 2026-04-25 01:19:05,490 | INFO     | current memory leak: -0.36 B/s (using 447 data points, chi2=0.21)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,491 | INFO     | could have reported an average CPU frequency of 2899 MHz (19 samples)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,491 | INFO     | ..............................
[2026-04-24 21:19:40] 2026-04-25 01:19:05,491 | INFO     | . Timing measurements:
[2026-04-24 21:19:40] 2026-04-25 01:19:05,491 | INFO     | . get job = 0 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,491 | INFO     | . initial setup = 39 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | . payload setup = 70 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | . stage-in = 0 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | . payload execution = 28272 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | . stage-out = 5 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | . log creation = 0 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,492 | INFO     | ..............................
[2026-04-24 21:19:40] 2026-04-25 01:19:05,701 | INFO     | 
[2026-04-24 21:19:40] 2026-04-25 01:19:05,701 | INFO     | job summary report
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | --------------------------------------------------
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | PanDA job id: 7101147378
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | task id: 49263200
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | errors: (none)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-24 21:19:40] 2026-04-25 01:19:05,702 | INFO     | pilot state: finished 
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | transexitcode: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | exeerrorcode: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | exeerrordiag: 
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | exitcode: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | exitmsg: OK
[2026-04-24 21:19:40] 2026-04-25 01:19:05,703 | INFO     | cpuconsumptiontime: 77249 s
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | nevents: 400
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | neventsw: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | pid: 871519
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | pgrp: 871519
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | corecount: 12
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | event service: False
[2026-04-24 21:19:40] 2026-04-25 01:19:05,704 | INFO     | sizes: {0: 2274603, 1: 2274659, 2: 2274687, 3: 2276516, 4: 2276572, 28348: 2313533, 28354: 2322587, 28355: 2322725}
[2026-04-24 21:19:40] 2026-04-25 01:19:05,705 | INFO     | --------------------------------------------------
[2026-04-24 21:19:40] 2026-04-25 01:19:05,705 | INFO     | 
[2026-04-24 21:19:40] 2026-04-25 01:19:05,728 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-24 21:19:40] 2026-04-25 01:19:05,941 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,942 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,942 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,942 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,944 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,945 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-24 21:19:40] 2026-04-25 01:19:05,953 | INFO     | job 7101147378 has completed (purged errors)
[2026-04-24 21:19:40] 2026-04-25 01:19:05,954 | INFO     | overall cleanup function is called
[2026-04-24 21:19:40] 2026-04-25 01:19:06,979 | INFO     | --- collectZombieJob: --- 10, [871519]
[2026-04-24 21:19:40] 2026-04-25 01:19:06,979 | INFO     | zombie collector waiting for pid 871519
[2026-04-24 21:19:40] 2026-04-25 01:19:06,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-24 21:19:40] 2026-04-25 01:19:06,980 | INFO     | collected zombie processes
[2026-04-24 21:19:40] 2026-04-25 01:19:06,980 | INFO     | will attempt to kill all subprocesses of pid=871519
[2026-04-24 21:19:40] 2026-04-25 01:19:07,453 | INFO     | process IDs to be killed: [871519] (in reverse order)
[2026-04-24 21:19:40] 2026-04-25 01:19:07,817 | WARNING  | found no corresponding commands to process id(s)
[2026-04-24 21:19:40] 2026-04-25 01:19:07,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-24 21:19:40] 2026-04-25 01:19:07,850 | INFO     | did not find any defunct processes belonging to 871519
[2026-04-24 21:19:40] 2026-04-25 01:19:07,872 | INFO     | did not find any defunct processes belonging to 871519
[2026-04-24 21:19:40] 2026-04-25 01:19:07,873 | INFO     | Ready for new job
[2026-04-24 21:19:40] 2026-04-25 01:19:07,876 | INFO     | ***************************************
[2026-04-24 21:19:40] 2026-04-25 01:19:07,876 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-24 21:19:40] 2026-04-25 01:19:07,876 | INFO     | ***************************************
[2026-04-24 21:19:40] 2026-04-25 01:19:07,876 | INFO     | 
[2026-04-24 21:19:40] 2026-04-25 01:19:07,882 | INFO     | architecture information:
[2026-04-24 21:19:40] 2026-04-25 01:19:07,889 | INFO     | executing command: cat /etc/os-release
[2026-04-24 21:19:40] 2026-04-25 01:19:07,931 | INFO     | cat /etc/os-release:
[2026-04-24 21:19:40] NAME="CentOS Linux"
[2026-04-24 21:19:40] VERSION="7 (Core)"
[2026-04-24 21:19:40] ID="centos"
[2026-04-24 21:19:40] ID_LIKE="rhel fedora"
[2026-04-24 21:19:40] VERSION_ID="7"
[2026-04-24 21:19:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-24 21:19:40] ANSI_COLOR="0;31"
[2026-04-24 21:19:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-24 21:19:40] HOME_URL="https://www.centos.org/"
[2026-04-24 21:19:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-24 21:19:40] 
[2026-04-24 21:19:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-24 21:19:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-24 21:19:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-24 21:19:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-24 21:19:40] 
[2026-04-24 21:19:40] 2026-04-25 01:19:07,932 | INFO     | ***************************************
[2026-04-24 21:19:40] 2026-04-25 01:19:08,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-24 21:19:40] 2026-04-25 01:19:08,486 | INFO     | sufficient remaining disk space (53784608768 B)
[2026-04-24 21:19:40] 2026-04-25 01:19:08,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-24 21:19:40] 2026-04-25 01:19:08,486 | INFO     | current server update state: UPDATING_FINAL
[2026-04-24 21:19:40] 2026-04-25 01:19:08,487 | INFO     | update_server=False
[2026-04-24 21:19:40] 2026-04-25 01:19:08,487 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-24 21:19:40] 2026-04-25 01:19:08,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-24 21:19:40] 2026-04-25 01:19:08,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-24 21:19:40] 2026-04-25 01:19:08,488 | INFO     | aborting loop
[2026-04-24 21:19:40] 2026-04-25 01:19:08,638 | INFO     | all data control threads have been joined
[2026-04-24 21:19:40] 2026-04-25 01:19:08,864 | INFO     | all job control threads have been joined
[2026-04-24 21:19:40] 2026-04-25 01:19:09,493 | INFO     | [job] retrieve thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,494 | INFO     | [job] job monitor thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,653 | INFO     | [data] control thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,694 | INFO     | [job] create_data_payload thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,780 | INFO     | [payload] validate_post thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,872 | INFO     | [job] control thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:09,883 | INFO     | all payload control threads have been joined
[2026-04-24 21:19:40] 2026-04-25 01:19:10,343 | INFO     | [payload] validate_pre thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,345 | INFO     | [data] copytool_in thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,347 | INFO     | [payload] execute_payloads thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,357 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,494 | INFO     | [data] copytool_out thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,714 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-24 21:19:40] 2026-04-25 01:19:10,774 | INFO     | [payload] failed_post thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,875 | INFO     | [job] validate thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,889 | INFO     | [payload] control thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:10,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-24 21:19:40] 2026-04-25 01:19:11,727 | INFO     | [job] queue monitor thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:14,968 | INFO     | [data] queue_monitor thread has finished
[2026-04-24 21:19:40] 2026-04-25 01:19:18,581 | INFO     | [monitor] cgroup control has ended
[2026-04-24 21:19:40] 2026-04-25 01:19:20,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140578653632320)>', '<ExcThread(monitor, started 140578222233344)>']
[2026-04-24 21:19:40] 2026-04-25 01:19:25,216 | INFO     | all workflow threads have been joined
[2026-04-24 21:19:40] 2026-04-25 01:19:25,217 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-24 21:19:40] 2026-04-25 01:19:25,218 | INFO     | traces error code: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:25,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-24 21:19:40] 2026-04-25 01:19:39,418 | INFO     | PID=860586 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-04-24 21:19:40] 2026-04-25 01:19:39,419 | INFO     | .. there are 28 such processes running
[2026-04-24 21:19:40] 2026-04-25 01:19:39,421 | INFO     | found 0 job(s) in 20 queues
[2026-04-24 21:19:40] 2026-04-25 01:19:39,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-24 21:19:40] 2026-04-25 01:19:39,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-24 21:19:40] 2026-04-25 01:19:39,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-24 21:19:40] 2026-04-25 01:19:39,422 | INFO     | [monitor] control thread has ended
[2026-04-24 21:19:40] 2026-04-25 01:19:39,616 [wrapper] ==== pilot stdout END ====
[2026-04-24 21:19:40] 2026-04-25 01:19:39,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-24 21:19:40] 2026-04-25 01:19:39,629 [wrapper] pilotpid: 860586
[2026-04-24 21:19:40] 2026-04-25 01:19:39,635 [wrapper] Pilot exit status: 0
[2026-04-24 21:19:40] 2026-04-25 01:19:39,653 [wrapper] pandaids: 7101147378
[2026-04-24 21:19:40] 2026-04-25 01:19:39,898 [wrapper] cleanup supervisor_pilot 3659130 860587
[2026-04-24 21:19:40] 2026-04-25 01:19:39,902 [wrapper] Test setup, not cleaning
[2026-04-24 21:19:40] 2026-04-25 01:19:39,906 [wrapper] apfmon messages muted
[2026-04-24 21:19:40] 2026-04-25 01:19:39,909 [wrapper] ==== wrapper stdout END ====
[2026-04-24 21:19:40] 2026-04-25 01:19:39,913 [wrapper] ==== wrapper stderr END ====
[2026-04-24 21:19:40]  *** Error codes and diagnostics ***
[2026-04-24 21:19:40]     "exeErrorCode": 0,
[2026-04-24 21:19:40]     "pilotErrorCode": 0,
[2026-04-24 21:19:40]  *** Listing of results directory ***
[2026-04-24 21:19:40] total 421044
[2026-04-24 21:19:40] -rwx------. 1 boincer umatlas     36322 Apr 23 07:24 runpilot2-wrapper.sh
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas      5631 Apr 24 13:22 queuedata.json
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas    683926 Apr 24 13:22 pilot3.tar.gz
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas       100 Apr 24 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-24 21:19:40] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 24 13:24 run_atlas
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas       105 Apr 24 13:24 job.xml
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas 226324126 Apr 24 13:24 EVNT.49263198._000731.pool.root.1
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas     15667 Apr 24 13:24 start_atlas.sh
[2026-04-24 21:19:40] drwxrwx--x. 2 boincer umatlas      4096 Apr 24 13:24 shared
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas    697426 Apr 24 13:24 input.tar.gz
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas         0 Apr 24 13:24 boinc_lockfile
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas      2575 Apr 24 13:24 pandaJob.out
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas        57 Apr 24 13:24 setup.sh.local
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas    997606 Apr 24 13:25 agis_schedconf.cvmfs.json
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas       434 Apr 24 13:26 workernode_map.json
[2026-04-24 21:19:40] drwx------. 5 boincer umatlas      4096 Apr 24 13:26 pilot3
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas      6440 Apr 24 21:13 init_data.xml
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas 195446122 Apr 24 21:18 HITS.49263200._073352.pool.root.1
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas       488 Apr 24 21:18 boinc_task_state.xml
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas      1046 Apr 24 21:18 memory_monitor_summary.json
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas   1509089 Apr 24 21:19 agis_ddmendpoints.agis.ALL.json
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas    564522 Apr 24 21:19 log.49263200._073352.job.log.tgz.1
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas      6405 Apr 24 21:19 heartbeat_new.json
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas      6296 Apr 24 21:19 heartbeat.json
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas      8192 Apr 24 21:19 boinc_mmap_file
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas        28 Apr 24 21:19 wrapper_checkpoint.txt
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas        95 Apr 24 21:19 pilot_heartbeat.json
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas       822 Apr 24 21:19 pilotlog.txt
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas   2061105 Apr 24 21:19 log.49263200._073352.job.log.1
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas       357 Apr 24 21:19 output.list
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas       410 Apr 24 21:19 runtime_log
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas   2641920 Apr 24 21:19 result.tar.gz
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas      8967 Apr 24 21:19 runtime_log.err
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas       657 Apr 24 21:19 01731ce4f600.diag
[2026-04-24 21:19:40] -rw-r--r--. 1 boincer umatlas     21356 Apr 24 21:19 stderr.txt
[2026-04-24 21:19:40] HITS file was successfully produced:
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas 195446122 Apr 24 21:18 shared/HITS.pool.root.1
[2026-04-24 21:19:40]  *** Contents of shared directory: ***
[2026-04-24 21:19:40] total 415172
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas 226324126 Apr 24 13:24 ATLAS.root_0
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas     15667 Apr 24 13:24 start_atlas.sh
[2026-04-24 21:19:40] -rw-r--r--. 2 boincer umatlas    697426 Apr 24 13:24 input.tar.gz
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas 195446122 Apr 24 21:18 HITS.pool.root.1
[2026-04-24 21:19:40] -rw-------. 1 boincer umatlas   2641920 Apr 24 21:19 result.tar.gz
21:19:42 (853811): run_atlas exited; CPU time 78538.216174
21:19:42 (853811): called boinc_finish(0)

</stderr_txt>
]]>

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