Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-04-24 14:54:42 (6724): vboxwrapper version 26210
2026-04-24 14:54:42 (6724): BOINC client version: 8.2.8
2026-04-24 14:54:42 (6724): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-04-24 14:54:43 (6724): Successfully copied 'init_data.xml' to the shared directory.
2026-04-24 14:54:43 (6724): Create VM. (boinc_4ea6696c825f6790, slot#2)
2026-04-24 14:54:44 (6724): Setting Memory Size for VM. (4600MB)
2026-04-24 14:54:44 (6724): Setting CPU Count for VM. (6)
2026-04-24 14:54:44 (6724): Setting Chipset Options for VM.
2026-04-24 14:54:44 (6724): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-04-24 14:54:45 (6724): Setting Boot Options for VM.
2026-04-24 14:54:45 (6724): Setting Network Configuration for NAT. (Driver: virtio)
2026-04-24 14:54:46 (6724): Enabling VM Network Access.
2026-04-24 14:54:46 (6724): Disabling USB Support for VM.
2026-04-24 14:54:46 (6724): Disabling COM Port Support for VM.
2026-04-24 14:54:46 (6724): Disabling LPT Port Support for VM.
2026-04-24 14:54:47 (6724): Disabling Audio Support for VM.
2026-04-24 14:54:47 (6724): Disabling Clipboard Support for VM.
2026-04-24 14:54:47 (6724): Disabling Drag and Drop Support for VM.
2026-04-24 14:54:47 (6724): Adding storage controller(s) to VM.
2026-04-24 14:54:48 (6724): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-04-24 14:54:49 (6724): Adding VirtualBox Guest Additions to VM.
2026-04-24 14:54:49 (6724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-04-24 14:54:49 (6724): forwarding host port 58350 to guest port 80
2026-04-24 14:54:49 (6724): Enabling remote desktop for VM.
2026-04-24 14:54:50 (6724): Required extension pack not installed, remote desktop not enabled.
2026-04-24 14:54:50 (6724): Enabling shared directory for VM.
2026-04-24 14:54:50 (6724): Starting VM using VBoxManage interface. (boinc_4ea6696c825f6790, slot#2)
2026-04-24 14:54:55 (6724): Successfully started VM. (PID = '6464')
2026-04-24 14:54:55 (6724): Reporting VM Process ID to BOINC.
2026-04-24 14:54:55 (6724): Guest Log: BIOS: VirtualBox 6.1.34
2026-04-24 14:54:55 (6724): Guest Log: CPUID EDX: 0x178bfbff
2026-04-24 14:54:55 (6724): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-04-24 14:54:55 (6724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-04-24 14:54:55 (6724): VM state change detected. (old = 'poweredoff', new = 'running')
2026-04-24 14:54:55 (6724): Detected: Web Application Enabled (http://localhost:58350)
2026-04-24 14:54:55 (6724): Preference change detected
2026-04-24 14:54:55 (6724): Setting CPU throttle for VM. (75%)
2026-04-24 14:54:55 (6724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-04-24 14:54:57 (6724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-04-24 14:54:57 (6724): Guest Log: BIOS: Booting from Hard Disk...
2026-04-24 14:55:01 (6724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-04-24 14:55:01 (6724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-04-24 14:55:01 (6724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-04-24 14:55:13 (6724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-04-24 14:55:13 (6724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-04-24 14:55:30 (6724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000247 main     Log opened 2026-04-24T14:55:28.555666000Z
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000373 main     OS Product: Linux
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000463 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000560 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000562 main     Process ID: 1339
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.000563 main     Package type: LINUX_64BITS_GENERIC
2026-04-24 14:55:30 (6724): Guest Log: 00:00:00.002134 main     5.2.32 r132073 started. Verbose level = 0
2026-04-24 14:55:30 (6724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-04-24 14:55:30 (6724): Guest Log: [INFO] Mounting shared directory
2026-04-24 14:55:30 (6724): Guest Log: [INFO] Checking for init_data.xml
2026-04-24 14:55:35 (6724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-04-24 14:55:35 (6724): Guest Log: [INFO] Detected branch: prod
2026-04-24 14:55:36 (6724): Guest Log: This is the prod version of the ATLAS job wrapper
2026-04-24 14:55:36 (6724): Guest Log: Copying input files
2026-04-24 14:55:40 (6724): Guest Log: 00:00:10.006323 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 093 848 000ns (GuestNow=1 777 056 939 653 774 000 ns GuestLast=1 777 042 528 559 926 000 ns fSetTimeLastLoop=true )
2026-04-24 14:56:10 (6724): Guest Log: Copied input files into RunAtlas.
2026-04-24 14:56:10 (6724): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-04-24 14:56:10 (6724): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-04-24 14:56:10 (6724): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-04-24 14:56:10 (6724): Guest Log: Further information can be found at the LHC@home message board.
2026-04-24 14:56:34 (6724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-04-24 14:56:34 (6724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-04-24 14:56:34 (6724): Guest Log: 2.6.3.0 1618 1 32164 158822 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-04-24 14:56:37 (6724): Guest Log: copied the webapp to /var/www
2026-04-24 14:56:37 (6724): Guest Log: ATHENA_PROC_NUMBER=6
2026-04-24 14:56:37 (6724): Guest Log: ATHENA_CORE_NUMBER=6
2026-04-24 14:56:38 (6724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-04-24 14:56:38 (6724): Guest Log:  *** Starting ATLAS job. (PandaID=7105521682 taskID=49820375) ***
2026-04-24 16:35:00 (6724): Status Report: Elapsed Time: '6000.000000'
2026-04-24 16:35:00 (6724): Status Report: CPU Time: '21970.875000'
2026-04-24 18:15:06 (6724): Status Report: Elapsed Time: '12000.000000'
2026-04-24 18:15:06 (6724): Status Report: CPU Time: '49010.281250'
2026-04-24 19:55:12 (6724): Status Report: Elapsed Time: '18000.000000'
2026-04-24 19:55:12 (6724): Status Report: CPU Time: '76047.421875'
2026-04-24 21:35:18 (6724): Status Report: Elapsed Time: '24000.000000'
2026-04-24 21:35:18 (6724): Status Report: CPU Time: '103086.375000'
2026-04-24 23:15:24 (6724): Status Report: Elapsed Time: '30000.000000'
2026-04-24 23:15:24 (6724): Status Report: CPU Time: '130122.593750'
2026-04-25 00:55:30 (6724): Status Report: Elapsed Time: '36000.000000'
2026-04-25 00:55:30 (6724): Status Report: CPU Time: '157157.890625'
2026-04-25 02:21:57 (6724): Guest Log:  *** Job finished ***
2026-04-25 02:21:57 (6724): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:29,425 | INFO     | [job] queue monitor thread has finished
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:30,683 | INFO     | [data] queue_monitor thread has finished
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:49,721 | INFO     | [monitor] cgroup control has ended
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:50,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406765303616)>', '<ExcThread(monitor, started 140406104782592)>']
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:51,277 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:51,278 | INFO     | [monitor] control thread has ended
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:55,928 | INFO     | all workflow threads have been joined
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:55,928 | INFO     | end of generic workflow (traces error code: 0)
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:55,929 | INFO     | traces error code: 0
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:55,929 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,246 [wrapper] ==== pilot stdout END ====
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,263 [wrapper] ==== wrapper stdout RESUME ====
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,279 [wrapper] pilotpid: 6053
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,295 [wrapper] Pilot exit status: 0
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,486 [wrapper] pandaids: 7105521682
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,553 [wrapper] cleanup supervisor_pilot  5632 6054
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,560 [wrapper] Test setup, not cleaning
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,566 [wrapper] apfmon messages muted
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,572 [wrapper] ==== wrapper stdout END ====
2026-04-25 02:21:57 (6724): Guest Log: 2026-04-25 06:21:56,577 [wrapper] ==== wrapper stderr END ====
2026-04-25 02:21:57 (6724): Guest Log:  *** Error codes and diagnostics ***
2026-04-25 02:21:57 (6724): Guest Log:     "exeErrorCode": 0,
2026-04-25 02:21:57 (6724): Guest Log:     "pilotErrorCode": 0,
2026-04-25 02:21:57 (6724): Guest Log:  *** Listing of results directory ***
2026-04-25 02:21:57 (6724): Guest Log: total 281484
2026-04-25 02:21:57 (6724): Guest Log: -rwx------. 1 atlas atlas     36322 Apr 22 18:37 runpilot2-wrapper.sh
2026-04-25 02:21:57 (6724): Guest Log: -rw-r--r--. 1 atlas atlas      5631 Apr 24 13:55 queuedata.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-r--r--. 1 atlas atlas    683926 Apr 24 13:55 pilot3.tar.gz
2026-04-25 02:21:57 (6724): Guest Log: -rwxr-xr-x. 1 atlas atlas      7745 Apr 24 18:56 init_data.xml
2026-04-25 02:21:57 (6724): Guest Log: -rwxr-xr-x. 1 atlas atlas    697433 Apr 24 18:56 input.tar.gz
2026-04-25 02:21:57 (6724): Guest Log: -rwxr-xr-x. 1 atlas atlas     15665 Apr 24 18:56 start_atlas.sh
2026-04-25 02:21:57 (6724): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 24 18:56 EVNT.49820373._000046.pool.root.1 -> /data/./ATLAS.root_0
2026-04-25 02:21:57 (6724): Guest Log: -rw-r--r--. 1 atlas atlas      2586 Apr 24 18:56 pandaJob.out
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas    997606 Apr 24 18:57 agis_schedconf.cvmfs.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas       427 Apr 24 18:57 workernode_map.json
2026-04-25 02:21:57 (6724): Guest Log: drwx------. 5 atlas atlas      4096 Apr 24 18:58 pilot3
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas 275696372 Apr 25 06:19 HITS.49820375._011733.pool.root.1
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas        95 Apr 25 06:20 pilot_heartbeat.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 25 06:21 memory_monitor_summary.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas   1509089 Apr 25 06:21 agis_ddmendpoints.agis.ALL.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas    712550 Apr 25 06:21 log.49820375._011733.job.log.tgz.1
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas      6393 Apr 25 06:21 heartbeat_new.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas      6284 Apr 25 06:21 heartbeat.json
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas      4611 Apr 25 06:21 pilotlog.txt
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas   3529327 Apr 25 06:21 log.49820375._011733.job.log.1
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas       357 Apr 25 06:21 output.list
2026-04-25 02:21:57 (6724): Guest Log: -rw-r--r--. 1 atlas atlas       410 Apr 25 06:21 runtime_log
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas   4259840 Apr 25 06:21 result.tar.gz
2026-04-25 02:21:57 (6724): Guest Log: -rw-r--r--. 1 atlas atlas      8362 Apr 25 06:21 runtime_log.err
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas       656 Apr 25 06:21 1556c98d79da.diag
2026-04-25 02:21:57 (6724): Guest Log: Looking for outputfile HITS.49820375._011733.pool.root.1
2026-04-25 02:21:57 (6724): Guest Log: HITS file was successfully produced
2026-04-25 02:21:57 (6724): Guest Log: -rw-------. 1 atlas atlas 275696372 Apr 25 06:19 /home/atlas/RunAtlas/HITS.49820375._011733.pool.root.1
2026-04-25 02:22:00 (6724): Guest Log: Successfully finished the ATLAS job!
2026-04-25 02:22:00 (6724): Guest Log: Copying the results back to the shared directory!
2026-04-25 02:22:00 (6724): Guest Log:  *** Contents of shared directory: ***
2026-04-25 02:22:00 (6724): Guest Log: total 2459808
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root 2238159420 Apr 24 18:54 ATLAS.root_0
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root  275696372 Apr 25 06:21 HITS.pool.root.1
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root       7745 Apr 24 18:54 init_data.xml
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root     697433 Apr 24 14:04 input.tar.gz
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root    4259840 Apr 25 06:21 result.tar.gz
2026-04-25 02:22:00 (6724): Guest Log: -rwxrwxrwx. 1 root root      15665 Apr 24 14:04 start_atlas.sh
2026-04-25 02:22:00 (6724): Guest Log:  *** Success! Shutting down the machine. ***
2026-04-25 02:22:00 (6724): VM Completion File Detected.
2026-04-25 02:22:00 (6724): Powering off VM.
2026-04-25 02:22:02 (6724): Successfully stopped VM.
2026-04-25 02:22:02 (6724): Deregistering VM. (boinc_4ea6696c825f6790, slot#2)
2026-04-25 02:22:02 (6724): Removing network bandwidth throttle group from VM.
2026-04-25 02:22:02 (6724): Removing VM from VirtualBox.
2026-04-25 02:22:08 (6724): called boinc_finish(0)

</stderr_txt>
]]>

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