Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:46 (4052321): wrapper (7.7.26015): starting
10:08:46 (4052321): wrapper: running run_atlas (--nthreads 12)
[2026-04-24 10:08:46] Arguments: --nthreads 12
[2026-04-24 10:08:46] Threads: 12
[2026-04-24 10:08:46] Checking for CVMFS
[2026-04-24 10:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-24 10:08:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-24 10:08:46] Running cvmfs_config stat atlas.cern.ch
[2026-04-24 10:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-24 10:08:47] 2.13.3.0 7109 244688 747616 158809 2 693 20673744 21042176 13017 16776704 0 842112760 99.410 1237202894 30276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-24 10:08:47] CVMFS is ok
[2026-04-24 10:08:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 10:08:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 10:08:47] Further information can be found at the LHC@home message board.
[2026-04-24 10:08:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 10:08:47] Checking for apptainer binary...
[2026-04-24 10:08:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-24 10:08:47] Running /usr/bin/apptainer --version
[2026-04-24 10:08:47] apptainer version 1.4.5-2.el9
[2026-04-24 10:08:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 10:08:47] c-16-11.aglt2.org
[2026-04-24 10:08:47] apptainer works
[2026-04-24 10:08:47] Set ATHENA_PROC_NUMBER=12
[2026-04-24 10:08:47] Set ATHENA_CORE_NUMBER=12
[2026-04-24 10:08:47] Starting ATLAS job with PandaID=7105532878
[2026-04-24 10:08:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-25 01:55:51]  *** The last 200 lines of the pilot log: ***
[2026-04-25 01:55:51] 2026-04-25 05:54:40,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-25 01:55:51] 2026-04-25 05:54:41,334 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-25 01:55:51] 2026-04-25 05:54:43,343 | INFO     | monitor loop #2969: job 0:7105532878 is in state 'finished'
[2026-04-25 01:55:51] 2026-04-25 05:54:43,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,474 | INFO     | job 7105532878 has state=finished
[2026-04-25 01:55:51] 2026-04-25 05:54:43,474 | INFO     | preparing for final server update for job 7105532878 in state='finished'
[2026-04-25 01:55:51] 2026-04-25 05:54:43,475 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7105532878/jobReport.json
[2026-04-25 01:55:51] 2026-04-25 05:54:43,525 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-25 01:55:51] 2026-04-25 05:54:43,525 | INFO     | this job has now completed (state=finished)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,526 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,526 | INFO     | log transfer has been attempted: DONE
[2026-04-25 01:55:51] 2026-04-25 05:54:43,554 | INFO     | job 7105532878 has finished - writing final server update
[2026-04-25 01:55:51] 2026-04-25 05:54:43,555 | INFO     | total number of processed events: 400 (read)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,583 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7105532878/memory_monitor_summary.json (trf name=prmon)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,584 | INFO     | extracted standard info from prmon json
[2026-04-25 01:55:51] 2026-04-25 05:54:43,585 | INFO     | extracted standard memory fields from prmon json
[2026-04-25 01:55:51] 2026-04-25 05:54:43,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-25 01:55:51] 2026-04-25 05:54:43,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-25 01:55:51] 2026-04-25 05:54:43,608 | INFO     | fitting pss+swap vs Time
[2026-04-25 01:55:51] 2026-04-25 05:54:43,610 | INFO     | sum of square deviations: 248608042961.96597
[2026-04-25 01:55:51] 2026-04-25 05:54:43,635 | INFO     | sum of deviations: 255279122942.30692
[2026-04-25 01:55:51] 2026-04-25 05:54:43,636 | INFO     | mean x (centered): 0.0
[2026-04-25 01:55:51] 2026-04-25 05:54:43,636 | INFO     | mean y: 2769858.2034445642
[2026-04-25 01:55:51] 2026-04-25 05:54:43,636 | INFO     | intersect: 2769858.2034445642
[2026-04-25 01:55:51] 2026-04-25 05:54:43,638 | INFO     | chi2: 2.9380967956352366
[2026-04-25 01:55:51] 2026-04-25 05:54:43,639 | INFO     | sum of square deviations: 244615665242.26816
[2026-04-25 01:55:51] 2026-04-25 05:54:43,664 | INFO     | sum of deviations: 319255172122.8398
[2026-04-25 01:55:51] 2026-04-25 05:54:43,664 | INFO     | mean x (centered): 0.0
[2026-04-25 01:55:51] 2026-04-25 05:54:43,665 | INFO     | mean y: 2772290.936147186
[2026-04-25 01:55:51] 2026-04-25 05:54:43,665 | INFO     | intersect: 2772290.936147186
[2026-04-25 01:55:51] 2026-04-25 05:54:43,666 | INFO     | chi2: 2.232964180392929
[2026-04-25 01:55:51] 2026-04-25 05:54:43,667 | INFO     | current chi2=2.232964180392929 (change=23.999638687528442 %)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,667 | INFO     | right removable region: 923
[2026-04-25 01:55:51] 2026-04-25 05:54:43,668 | INFO     | sum of square deviations: 244615117462.26825
[2026-04-25 01:55:51] 2026-04-25 05:54:43,693 | INFO     | sum of deviations: 39897237660.77936
[2026-04-25 01:55:51] 2026-04-25 05:54:43,693 | INFO     | mean x (centered): 0.0
[2026-04-25 01:55:51] 2026-04-25 05:54:43,693 | INFO     | mean y: 2778070.337662338
[2026-04-25 01:55:51] 2026-04-25 05:54:43,693 | INFO     | intersect: 2778070.337662338
[2026-04-25 01:55:51] 2026-04-25 05:54:43,695 | INFO     | chi2: 0.9231780995251577
[2026-04-25 01:55:51] 2026-04-25 05:54:43,695 | INFO     | current chi2=0.9231780995251577 (change=68.57904406360579 %)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,697 | INFO     | sum of square deviations: 240665169512.5195
[2026-04-25 01:55:51] 2026-04-25 05:54:43,721 | INFO     | sum of deviations: -9876909643.008644
[2026-04-25 01:55:51] 2026-04-25 05:54:43,722 | INFO     | mean x (centered): 0.0
[2026-04-25 01:55:51] 2026-04-25 05:54:43,722 | INFO     | mean y: 2779989.5233949944
[2026-04-25 01:55:51] 2026-04-25 05:54:43,722 | INFO     | intersect: 2779989.5233949944
[2026-04-25 01:55:51] 2026-04-25 05:54:43,723 | INFO     | chi2: 0.821674610451421
[2026-04-25 01:55:51] 2026-04-25 05:54:43,724 | INFO     | current chi2=0.821674610451421 (change=10.995006177675323 %)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,724 | INFO     | left removable region: 10
[2026-04-25 01:55:51] 2026-04-25 05:54:43,725 | INFO     | sum of square deviations: 235982292226.75385
[2026-04-25 01:55:51] 2026-04-25 05:54:43,750 | INFO     | sum of deviations: 54618129810.58487
[2026-04-25 01:55:51] 2026-04-25 05:54:43,751 | INFO     | mean x (centered): 0.0
[2026-04-25 01:55:51] 2026-04-25 05:54:43,751 | INFO     | mean y: 2782495.838992333
[2026-04-25 01:55:51] 2026-04-25 05:54:43,751 | INFO     | intersect: 2782495.838992333
[2026-04-25 01:55:51] 2026-04-25 05:54:43,752 | INFO     | chi2: 0.11074433880571999
[2026-04-25 01:55:51] 2026-04-25 05:54:43,753 | INFO     | current memory leak: 0.23 B/s (using 913 data points, chi2=0.11)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,754 | INFO     | could have reported an average CPU frequency of 2900 MHz (35 samples)
[2026-04-25 01:55:51] 2026-04-25 05:54:43,754 | INFO     | ..............................
[2026-04-25 01:55:51] 2026-04-25 05:54:43,754 | INFO     | . Timing measurements:
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . get job = 0 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . initial setup = 23 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . payload setup = 37 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . stage-in = 0 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . payload execution = 56630 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . stage-out = 3 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,755 | INFO     | . log creation = 0 s
[2026-04-25 01:55:51] 2026-04-25 05:54:43,756 | INFO     | ..............................
[2026-04-25 01:55:51] 2026-04-25 05:54:44,005 | INFO     | 
[2026-04-25 01:55:51] 2026-04-25 05:54:44,005 | INFO     | job summary report
[2026-04-25 01:55:51] 2026-04-25 05:54:44,005 | INFO     | --------------------------------------------------
[2026-04-25 01:55:51] 2026-04-25 05:54:44,006 | INFO     | PanDA job id: 7105532878
[2026-04-25 01:55:51] 2026-04-25 05:54:44,006 | INFO     | task id: 49820244
[2026-04-25 01:55:51] 2026-04-25 05:54:44,006 | INFO     | errors: (none)
[2026-04-25 01:55:51] 2026-04-25 05:54:44,006 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-25 01:55:51] 2026-04-25 05:54:44,006 | INFO     | pilot state: finished 
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | transexitcode: 0
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | exeerrorcode: 0
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | exeerrordiag: 
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | exitcode: 0
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | exitmsg: OK
[2026-04-25 01:55:51] 2026-04-25 05:54:44,007 | INFO     | cpuconsumptiontime: 144502 s
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | nevents: 400
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | neventsw: 0
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | pid: 4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | pgrp: 4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | corecount: 12
[2026-04-25 01:55:51] 2026-04-25 05:54:44,008 | INFO     | event service: False
[2026-04-25 01:55:51] 2026-04-25 05:54:44,009 | INFO     | sizes: {0: 2273919, 1: 2274604, 2: 2275005, 3: 2276433, 14: 2276461, 56672: 2325827, 56675: 2334825, 56677: 2334881, 56680: 2335075}
[2026-04-25 01:55:51] 2026-04-25 05:54:44,030 | INFO     | --------------------------------------------------
[2026-04-25 01:55:51] 2026-04-25 05:54:44,030 | INFO     | 
[2026-04-25 01:55:51] 2026-04-25 05:54:44,031 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-25 01:55:51] 2026-04-25 05:54:44,126 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,127 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,127 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,127 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,130 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-25 01:55:51] 2026-04-25 05:54:44,130 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,130 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-25 01:55:51] 2026-04-25 05:54:44,130 | INFO     | job 7105532878 has completed (purged errors)
[2026-04-25 01:55:51] 2026-04-25 05:54:44,130 | INFO     | overall cleanup function is called
[2026-04-25 01:55:51] 2026-04-25 05:54:45,140 | INFO     | --- collectZombieJob: --- 10, [4077314]
[2026-04-25 01:55:51] 2026-04-25 05:54:45,140 | INFO     | zombie collector waiting for pid 4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:45,140 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-25 01:55:51] 2026-04-25 05:54:45,141 | INFO     | collected zombie processes
[2026-04-25 01:55:51] 2026-04-25 05:54:45,141 | INFO     | will attempt to kill all subprocesses of pid=4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:45,629 | INFO     | process IDs to be killed: [4077314] (in reverse order)
[2026-04-25 01:55:51] 2026-04-25 05:54:45,812 | WARNING  | found no corresponding commands to process id(s)
[2026-04-25 01:55:51] 2026-04-25 05:54:45,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-25 01:55:51] 2026-04-25 05:54:45,873 | INFO     | did not find any defunct processes belonging to 4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:45,892 | INFO     | did not find any defunct processes belonging to 4077314
[2026-04-25 01:55:51] 2026-04-25 05:54:45,892 | INFO     | Ready for new job
[2026-04-25 01:55:51] 2026-04-25 05:54:45,895 | INFO     | ***************************************
[2026-04-25 01:55:51] 2026-04-25 05:54:45,896 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-25 01:55:51] 2026-04-25 05:54:45,896 | INFO     | ***************************************
[2026-04-25 01:55:51] 2026-04-25 05:54:45,896 | INFO     | 
[2026-04-25 01:55:51] 2026-04-25 05:54:45,898 | INFO     | architecture information:
[2026-04-25 01:55:51] 2026-04-25 05:54:45,899 | INFO     | executing command: cat /etc/os-release
[2026-04-25 01:55:51] 2026-04-25 05:54:45,925 | INFO     | cat /etc/os-release:
[2026-04-25 01:55:51] NAME="CentOS Linux"
[2026-04-25 01:55:51] VERSION="7 (Core)"
[2026-04-25 01:55:51] ID="centos"
[2026-04-25 01:55:51] ID_LIKE="rhel fedora"
[2026-04-25 01:55:51] VERSION_ID="7"
[2026-04-25 01:55:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-25 01:55:51] ANSI_COLOR="0;31"
[2026-04-25 01:55:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-25 01:55:51] HOME_URL="https://www.centos.org/"
[2026-04-25 01:55:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-25 01:55:51] 
[2026-04-25 01:55:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-25 01:55:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-25 01:55:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-25 01:55:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-25 01:55:51] 
[2026-04-25 01:55:51] 2026-04-25 05:54:45,926 | INFO     | ***************************************
[2026-04-25 01:55:51] 2026-04-25 05:54:46,429 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-25 01:55:51] 2026-04-25 05:54:46,536 | INFO     | sufficient remaining disk space (45019561984 B)
[2026-04-25 01:55:51] 2026-04-25 05:54:46,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-25 01:55:51] 2026-04-25 05:54:46,536 | INFO     | current server update state: UPDATING_FINAL
[2026-04-25 01:55:51] 2026-04-25 05:54:46,537 | INFO     | update_server=False
[2026-04-25 01:55:51] 2026-04-25 05:54:46,537 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-25 01:55:51] 2026-04-25 05:54:46,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-25 01:55:51] 2026-04-25 05:54:46,882 | INFO     | aborting loop
[2026-04-25 01:55:51] 2026-04-25 05:54:47,071 | INFO     | all data control threads have been joined
[2026-04-25 01:55:51] 2026-04-25 05:54:47,173 | INFO     | all job control threads have been joined
[2026-04-25 01:55:51] 2026-04-25 05:54:47,543 | INFO     | [job] retrieve thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:47,560 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-25 01:55:51] 2026-04-25 05:54:47,680 | INFO     | all payload control threads have been joined
[2026-04-25 01:55:51] 2026-04-25 05:54:47,743 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-25 01:55:51] 2026-04-25 05:54:47,888 | INFO     | [job] job monitor thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:47,937 | INFO     | [payload] failed_post thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:47,938 | INFO     | [payload] execute_payloads thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:47,997 | INFO     | [job] create_data_payload thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,077 | INFO     | [data] control thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,178 | INFO     | [job] validate thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,179 | INFO     | [job] control thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,477 | INFO     | [payload] validate_post thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,486 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,686 | INFO     | [payload] control thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,918 | INFO     | [payload] validate_pre thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:48,994 | INFO     | [data] copytool_in thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:49,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-25 01:55:51] 2026-04-25 05:54:49,751 | INFO     | [data] copytool_out thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:50,024 | INFO     | [job] queue monitor thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:54:51,574 | INFO     | [data] queue_monitor thread has finished
[2026-04-25 01:55:51] 2026-04-25 05:55:16,089 | INFO     | PID=4060341 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-25 01:55:51] 2026-04-25 05:55:16,090 | INFO     | .. there are 21 such processes running
[2026-04-25 01:55:51] 2026-04-25 05:55:16,090 | INFO     | found 0 job(s) in 20 queues
[2026-04-25 01:55:51] 2026-04-25 05:55:16,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-25 01:55:51] 2026-04-25 05:55:16,091 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-25 01:55:51] 2026-04-25 05:55:44,722 | INFO     | [monitor] cgroup control has ended
[2026-04-25 01:55:51] 2026-04-25 05:55:45,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140575343372096)>', '<ExcThread(monitor, started 140574858397440)>']
[2026-04-25 01:55:51] 2026-04-25 05:55:46,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-25 01:55:51] 2026-04-25 05:55:46,297 | INFO     | [monitor] control thread has ended
[2026-04-25 01:55:51] 2026-04-25 05:55:50,760 | INFO     | all workflow threads have been joined
[2026-04-25 01:55:51] 2026-04-25 05:55:50,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-25 01:55:51] 2026-04-25 05:55:50,760 | INFO     | traces error code: 0
[2026-04-25 01:55:51] 2026-04-25 05:55:50,761 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-25 01:55:51] 2026-04-25 05:55:50,953 [wrapper] ==== pilot stdout END ====
[2026-04-25 01:55:51] 2026-04-25 05:55:50,958 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-25 01:55:51] 2026-04-25 05:55:50,967 [wrapper] pilotpid: 4060341
[2026-04-25 01:55:51] 2026-04-25 05:55:50,972 [wrapper] Pilot exit status: 0
[2026-04-25 01:55:51] 2026-04-25 05:55:50,993 [wrapper] pandaids: 7105532878
[2026-04-25 01:55:51] 2026-04-25 05:55:51,098 [wrapper] cleanup supervisor_pilot 3308322 4060342
[2026-04-25 01:55:51] 2026-04-25 05:55:51,102 [wrapper] Test setup, not cleaning
[2026-04-25 01:55:51] 2026-04-25 05:55:51,111 [wrapper] apfmon messages muted
[2026-04-25 01:55:51] 2026-04-25 05:55:51,116 [wrapper] ==== wrapper stdout END ====
[2026-04-25 01:55:51] 2026-04-25 05:55:51,120 [wrapper] ==== wrapper stderr END ====
[2026-04-25 01:55:51]  *** Error codes and diagnostics ***
[2026-04-25 01:55:51]     "exeErrorCode": 0,
[2026-04-25 01:55:51]     "pilotErrorCode": 0,
[2026-04-25 01:55:51]  *** Listing of results directory ***
[2026-04-25 01:55:51] total 2457236
[2026-04-25 01:55:51] -rwx------. 1 boincer umatlas      36322 Apr 22 14:22 runpilot2-wrapper.sh
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas       5631 Apr 24 09:55 queuedata.json
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas     683926 Apr 24 09:55 pilot3.tar.gz
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas        100 Apr 24 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-25 01:55:51] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 24 10:08 run_atlas
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas        105 Apr 24 10:08 job.xml
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas 2230781997 Apr 24 10:08 EVNT.49820242._000051.pool.root.1
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas      15665 Apr 24 10:08 start_atlas.sh
[2026-04-25 01:55:51] drwxrwx--x. 2 boincer umatlas       4096 Apr 24 10:08 shared
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas     697416 Apr 24 10:08 input.tar.gz
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas          0 Apr 24 10:08 boinc_lockfile
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas       2550 Apr 24 10:08 pandaJob.out
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas         57 Apr 24 10:08 setup.sh.local
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas     997560 Apr 24 10:09 agis_schedconf.cvmfs.json
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas        440 Apr 24 10:09 workernode_map.json
[2026-04-25 01:55:51] drwx------. 5 boincer umatlas       4096 Apr 24 10:09 pilot3
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas       6438 Apr 25 01:46 init_data.xml
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas  271539023 Apr 25 01:53 HITS.49820244._015255.pool.root.1
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas        490 Apr 25 01:53 boinc_task_state.xml
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas         95 Apr 25 01:54 pilot_heartbeat.json
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas       1040 Apr 25 01:54 memory_monitor_summary.json
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas    1509089 Apr 25 01:54 agis_ddmendpoints.agis.ALL.json
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas     784547 Apr 25 01:54 log.49820244._015255.job.log.tgz.1
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas       6404 Apr 25 01:54 heartbeat_new.json
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas       6295 Apr 25 01:54 heartbeat.json
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas         29 Apr 25 01:55 wrapper_checkpoint.txt
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas       4823 Apr 25 01:55 pilotlog.txt
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas    4089988 Apr 25 01:55 log.49820244._015255.job.log.1
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas        357 Apr 25 01:55 output.list
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas        410 Apr 25 01:55 runtime_log
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas    4894720 Apr 25 01:55 result.tar.gz
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas       8961 Apr 25 01:55 runtime_log.err
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas        658 Apr 25 01:55 11ce11103148.diag
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas       8192 Apr 25 01:55 boinc_mmap_file
[2026-04-25 01:55:51] -rw-r--r--. 1 boincer umatlas      21320 Apr 25 01:55 stderr.txt
[2026-04-25 01:55:51] HITS file was successfully produced:
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas 271539023 Apr 25 01:53 shared/HITS.pool.root.1
[2026-04-25 01:55:51]  *** Contents of shared directory: ***
[2026-04-25 01:55:51] total 2449164
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas 2230781997 Apr 24 10:08 ATLAS.root_0
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas      15665 Apr 24 10:08 start_atlas.sh
[2026-04-25 01:55:51] -rw-r--r--. 2 boincer umatlas     697416 Apr 24 10:08 input.tar.gz
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas  271539023 Apr 25 01:53 HITS.pool.root.1
[2026-04-25 01:55:51] -rw-------. 1 boincer umatlas    4894720 Apr 25 01:55 result.tar.gz
01:55:52 (4052321): run_atlas exited; CPU time 146640.400992
01:55:52 (4052321): called boinc_finish(0)

</stderr_txt>
]]>

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