Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:00:51 (4055865): wrapper (7.7.26015): starting
16:00:51 (4055865): wrapper: running run_atlas (--nthreads 12)
[2026-04-24 16:00:51] Arguments: --nthreads 12
[2026-04-24 16:00:51] Threads: 12
[2026-04-24 16:00:51] Checking for CVMFS
[2026-04-24 16:00:51] No cvmfs_config command found, will try listing directly
[2026-04-24 16:00:51] CVMFS is ok
[2026-04-24 16:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-24 16:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-24 16:00:51] Further information can be found at the LHC@home message board.
[2026-04-24 16:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-24 16:00:51] Checking for apptainer binary...
[2026-04-24 16:00:51] which: no apptainer in ((null))
[2026-04-24 16:00:51] apptainer is not installed, using version from CVMFS
[2026-04-24 16:00:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-24 16:00:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/13/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-04-24 16:00:51] apptainer works
[2026-04-24 16:00:51] Set ATHENA_PROC_NUMBER=12
[2026-04-24 16:00:51] Set ATHENA_CORE_NUMBER=12
[2026-04-24 16:00:51] Starting ATLAS job with PandaID=7105445836
[2026-04-24 16:00:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-24 16:35:07]  *** The last 200 lines of the pilot log: ***
[2026-04-24 16:35:07]  protocol_id=None
[2026-04-24 16:35:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-24 16:35:07]  replicas=None
[2026-04-24 16:35:07]  scope=mc23_13p6TeV
[2026-04-24 16:35:07]  status=None
[2026-04-24 16:35:07]  status_code=0
[2026-04-24 16:35:07]  storage_token=
[2026-04-24 16:35:07]  surl=/var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/log.49820375._011460.job.log.tgz.1
[2026-04-24 16:35:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/b1/log.49820375._011460.job.log.tgz.1
[2026-04-24 16:35:07]  workdir=None
[2026-04-24 16:35:07] ]
[2026-04-24 16:35:07] 2026-04-24 14:34:12,625 | INFO     | transferring file log.49820375._011460.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/log.49820375._011460.job.log.tgz.1 to /var/lib/
[2026-04-24 16:35:07] 2026-04-24 14:34:12,625 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/log.49820375._011460.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/13/
[2026-04-24 16:35:07] 2026-04-24 14:34:12,635 | INFO     | adding to output.list: log.49820375._011460.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/b1/log.49820375._011460.job.log.tg
[2026-04-24 16:35:07] 2026-04-24 14:34:12,636 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-24 16:35:07] 2026-04-24 14:34:12,636 | INFO     | summary of transferred files:
[2026-04-24 16:35:07] 2026-04-24 14:34:12,636 | INFO     |  -- lfn=log.49820375._011460.job.log.tgz.1, status_code=0, status=transferred
[2026-04-24 16:35:07] 2026-04-24 14:34:12,636 | INFO     | stage-out finished correctly
[2026-04-24 16:35:07] 2026-04-24 14:34:15,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-24 16:35:07] 2026-04-24 14:34:16,157 | INFO     | job 7105445836 has state=finished
[2026-04-24 16:35:07] 2026-04-24 14:34:16,157 | INFO     | preparing for final server update for job 7105445836 in state='finished'
[2026-04-24 16:35:07] 2026-04-24 14:34:16,158 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/jobReport.json
[2026-04-24 16:35:07] 2026-04-24 14:34:16,159 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/13/workernode_map.json
[2026-04-24 16:35:07] 2026-04-24 14:34:16,159 | INFO     | this job has now completed (state=finished)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,159 | INFO     | log transfer has been attempted: DONE
[2026-04-24 16:35:07] 2026-04-24 14:34:16,159 | INFO     | job 7105445836 has finished - writing final server update
[2026-04-24 16:35:07] 2026-04-24 14:34:16,160 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3908225/.job.ad'
[2026-04-24 16:35:07] 2026-04-24 14:34:16,160 | INFO     | total number of processed events: 400 (read)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,169 | INFO     | using path: /var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,169 | INFO     | extracted standard info from prmon json
[2026-04-24 16:35:07] 2026-04-24 14:34:16,169 | INFO     | extracted standard memory fields from prmon json
[2026-04-24 16:35:07] 2026-04-24 14:34:16,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-24 16:35:07] 2026-04-24 14:34:16,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | fitting pss+swap vs Time
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | sum of square deviations: 5441962.5
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | sum of deviations: 214270491.00000003
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | mean x (centered): 0.0
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | mean y: 2815366.6923076925
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | intersect: 2815366.6923076925
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | chi2: 8.17947297117932e-05
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | current memory leak: 39.37 B/s (using 26 data points, chi2=0.00)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | could have reported an average CPU frequency of 3525 MHz (5 samples)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | ..............................
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . Timing measurements:
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . get job = 0 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . initial setup = 2 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . payload setup = 3 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . stage-in = 0 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . payload execution = 1974 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . stage-out = 0 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | . log creation = 0 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,170 | INFO     | ..............................
[2026-04-24 16:35:07] 2026-04-24 14:34:16,312 | INFO     | 
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | job summary report
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | --------------------------------------------------
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | PanDA job id: 7105445836
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | task id: 49820375
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | errors: (none)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | pilot state: finished 
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | transexitcode: 0
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | exeerrorcode: 0
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | exeerrordiag: 
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | exitcode: 0
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | exitmsg: OK
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | cpuconsumptiontime: 21402 s
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | nevents: 400
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | neventsw: 0
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | pid: 4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | pgrp: 4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | corecount: 12
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | event service: False
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | sizes: {0: 2276426, 11: 2276426, 1981: 2301396, 1982: 2310418, 1986: 2310700}
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | --------------------------------------------------
[2026-04-24 16:35:07] 2026-04-24 14:34:16,313 | INFO     | 
[2026-04-24 16:35:07] 2026-04-24 14:34:16,314 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/13
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | job 7105445836 has completed (purged errors)
[2026-04-24 16:35:07] 2026-04-24 14:34:16,328 | INFO     | overall cleanup function is called
[2026-04-24 16:35:07] 2026-04-24 14:34:17,085 | WARNING  | process 4066573 can no longer be monitored (due to stat problems) - aborting
[2026-04-24 16:35:07] 2026-04-24 14:34:17,219 | INFO     | using path: /var/lib/boinc/var/slot72/slots/13/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 16:35:07] 2026-04-24 14:34:17,220 | INFO     | using path: /var/lib/boinc/var/slot72/slots/13/memory_monitor_summary.json (trf name=prmon)
[2026-04-24 16:35:07] 2026-04-24 14:34:17,220 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-24 16:35:07] 2026-04-24 14:34:17,220 | WARNING  | maxPSS not found in memory monitor output
[2026-04-24 16:35:07] 2026-04-24 14:34:17,220 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/payload.stdout) since it has not been created yet
[2026-04-24 16:35:07] 2026-04-24 14:34:17,220 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/13
[2026-04-24 16:35:07] 2026-04-24 14:34:17,229 | INFO     | sufficient remaining disk space (333368524800 B)
[2026-04-24 16:35:07] 2026-04-24 14:34:17,230 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-24 16:35:07] 2026-04-24 14:34:17,230 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/13/PanDA_Pilot-7105445836/HITS.49820375._011460.pool.root.1 since it does not exist
[2026-04-24 16:35:07] 2026-04-24 14:34:17,335 | INFO     | --- collectZombieJob: --- 10, [4066573]
[2026-04-24 16:35:07] 2026-04-24 14:34:17,336 | INFO     | zombie collector waiting for pid 4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:17,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-24 16:35:07] 2026-04-24 14:34:17,336 | INFO     | collected zombie processes
[2026-04-24 16:35:07] 2026-04-24 14:34:17,336 | INFO     | will attempt to kill all subprocesses of pid=4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:17,500 | INFO     | number of running child processes to parent process 4066573: 1
[2026-04-24 16:35:07] 2026-04-24 14:34:17,501 | INFO     | maximum number of monitored processes: 6
[2026-04-24 16:35:07] 2026-04-24 14:34:17,501 | INFO     | aborting job monitoring since job object (job id=7105445836) has expired
[2026-04-24 16:35:07] 2026-04-24 14:34:17,614 | INFO     | process IDs to be killed: [4066573] (in reverse order)
[2026-04-24 16:35:07] 2026-04-24 14:34:17,691 | WARNING  | found no corresponding commands to process id(s)
[2026-04-24 16:35:07] 2026-04-24 14:34:17,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-24 16:35:07] 2026-04-24 14:34:17,705 | INFO     | did not find any defunct processes belonging to 4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | did not find any defunct processes belonging to 4066573
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | Ready for new job
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | ***************************************
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | ***************************************
[2026-04-24 16:35:07] 2026-04-24 14:34:17,712 | INFO     | 
[2026-04-24 16:35:07] 2026-04-24 14:34:17,715 | INFO     | architecture information:
[2026-04-24 16:35:07] 2026-04-24 14:34:17,715 | INFO     | executing command: cat /etc/os-release
[2026-04-24 16:35:07] 2026-04-24 14:34:17,724 | INFO     | cat /etc/os-release:
[2026-04-24 16:35:07] NAME="CentOS Linux"
[2026-04-24 16:35:07] VERSION="7 (Core)"
[2026-04-24 16:35:07] ID="centos"
[2026-04-24 16:35:07] ID_LIKE="rhel fedora"
[2026-04-24 16:35:07] VERSION_ID="7"
[2026-04-24 16:35:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-24 16:35:07] ANSI_COLOR="0;31"
[2026-04-24 16:35:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-24 16:35:07] HOME_URL="https://www.centos.org/"
[2026-04-24 16:35:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-24 16:35:07] 
[2026-04-24 16:35:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-24 16:35:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-24 16:35:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-24 16:35:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-24 16:35:07] 
[2026-04-24 16:35:07] 2026-04-24 14:34:17,724 | INFO     | ***************************************
[2026-04-24 16:35:07] 2026-04-24 14:34:18,227 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/13
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | INFO     | sufficient remaining disk space (333368524800 B)
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | INFO     | current server update state: UPDATING_FINAL
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | INFO     | update_server=False
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-24 16:35:07] 2026-04-24 14:34:18,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-24 16:35:07] 2026-04-24 14:34:18,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-24 16:35:07] 2026-04-24 14:34:18,238 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-24 16:35:07] 2026-04-24 14:34:18,238 | INFO     | will abort loop
[2026-04-24 16:35:07] 2026-04-24 14:34:18,349 | INFO     | all payload control threads have been joined
[2026-04-24 16:35:07] 2026-04-24 14:34:18,854 | INFO     | all data control threads have been joined
[2026-04-24 16:35:07] 2026-04-24 14:34:19,108 | INFO     | all job control threads have been joined
[2026-04-24 16:35:07] 2026-04-24 14:34:19,241 | INFO     | [job] retrieve thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:19,244 | INFO     | [job] job monitor thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:19,355 | INFO     | [payload] control thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:19,860 | INFO     | [data] control thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,114 | INFO     | [job] control thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,206 | INFO     | [job] validate thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,206 | INFO     | [payload] validate_pre thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,206 | INFO     | [job] create_data_payload thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,242 | INFO     | [payload] execute_payloads thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,244 | INFO     | [data] copytool_out thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,296 | INFO     | [payload] failed_post thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,406 | INFO     | [data] copytool_in thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:20,809 | INFO     | [payload] validate_post thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:21,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-24 16:35:07] 2026-04-24 14:34:22,213 | INFO     | [job] queue monitor thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:22,243 | INFO     | [data] queue_monitor thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:28,975 | INFO     | job.realtimelogging is not enabled
[2026-04-24 16:35:07] 2026-04-24 14:34:29,978 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-24 16:35:07] 2026-04-24 14:34:48,794 | INFO     | PID=4060805 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-24 16:35:07] 2026-04-24 14:34:48,796 | INFO     | found 0 job(s) in 20 queues
[2026-04-24 16:35:07] 2026-04-24 14:34:48,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-24 16:35:07] 2026-04-24 14:34:48,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-24 16:35:07] 2026-04-24 14:35:01,286 | INFO     | [monitor] cgroup control has ended
[2026-04-24 16:35:07] 2026-04-24 14:35:02,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23372357068608)>', '<ExcThread(monitor, started 23372048066304)>']
[2026-04-24 16:35:07] 2026-04-24 14:35:02,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-24 16:35:07] 2026-04-24 14:35:02,864 | INFO     | [monitor] control thread has ended
[2026-04-24 16:35:07] 2026-04-24 14:35:07,760 | INFO     | all workflow threads have been joined
[2026-04-24 16:35:07] 2026-04-24 14:35:07,760 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-24 16:35:07] 2026-04-24 14:35:07,760 | INFO     | traces error code: 0
[2026-04-24 16:35:07] 2026-04-24 14:35:07,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-24 16:35:07] 2026-04-24 14:35:07,823 [wrapper] ==== pilot stdout END ====
[2026-04-24 16:35:07] 2026-04-24 14:35:07,825 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-24 16:35:07] 2026-04-24 14:35:07,826 [wrapper] pilotpid: 4060805
[2026-04-24 16:35:07] 2026-04-24 14:35:07,828 [wrapper] Pilot exit status: 0
[2026-04-24 16:35:07] 2026-04-24 14:35:07,835 [wrapper] pandaids: 7105445836
[2026-04-24 16:35:07] 2026-04-24 14:35:07,898 [wrapper] cleanup supervisor_pilot 4105272 4060806
[2026-04-24 16:35:07] 2026-04-24 14:35:07,900 [wrapper] Test setup, not cleaning
[2026-04-24 16:35:07] 2026-04-24 14:35:07,902 [wrapper] apfmon messages muted
[2026-04-24 16:35:07] 2026-04-24 14:35:07,903 [wrapper] ==== wrapper stdout END ====
[2026-04-24 16:35:07] 2026-04-24 14:35:07,905 [wrapper] ==== wrapper stderr END ====
[2026-04-24 16:35:07]  *** Error codes and diagnostics ***
[2026-04-24 16:35:07]     "exeErrorCode": 0,
[2026-04-24 16:35:07]     "pilotErrorCode": 0,
[2026-04-24 16:35:07]  *** Listing of results directory ***
[2026-04-24 16:35:07] total 2455328
[2026-04-24 16:35:07] -rwx------. 1 boinc boinc      36322 Apr 22 20:21 runpilot2-wrapper.sh
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc       5631 Apr 24 15:55 queuedata.json
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc     683926 Apr 24 15:55 pilot3.tar.gz
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc        100 Apr 24 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-24 16:35:07] -rwxr-xr-x. 1 boinc boinc       7986 Apr 24 16:00 run_atlas
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc        105 Apr 24 16:00 job.xml
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc 2235427021 Apr 24 16:00 EVNT.49820373._000042.pool.root.1
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc      15665 Apr 24 16:00 start_atlas.sh
[2026-04-24 16:35:07] drwxrwx--x. 2 boinc boinc       4096 Apr 24 16:00 shared
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc     697427 Apr 24 16:00 input.tar.gz
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc       6629 Apr 24 16:00 init_data.xml
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc          0 Apr 24 16:00 boinc_lockfile
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc       2586 Apr 24 16:00 pandaJob.out
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc     997560 Apr 24 16:00 agis_schedconf.cvmfs.json
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc    1509089 Apr 24 16:00 agis_ddmendpoints.agis.ALL.json
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc        444 Apr 24 16:00 workernode_map.json
[2026-04-24 16:35:07] drwx------. 5 boinc boinc       4096 Apr 24 16:00 pilot3
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc        488 Apr 24 16:33 boinc_task_state.xml
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc  273316057 Apr 24 16:33 HITS.49820375._011460.pool.root.1
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc       1029 Apr 24 16:34 memory_monitor_summary.json
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc     457484 Apr 24 16:34 log.49820375._011460.job.log.tgz.1
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc       6377 Apr 24 16:34 heartbeat_new.json
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc       6268 Apr 24 16:34 heartbeat.json
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc         95 Apr 24 16:34 pilot_heartbeat.json
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc       8192 Apr 24 16:35 boinc_mmap_file
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc         27 Apr 24 16:35 wrapper_checkpoint.txt
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc       4832 Apr 24 16:35 pilotlog.txt
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc     231010 Apr 24 16:35 log.49820375._011460.job.log.1
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc        357 Apr 24 16:35 output.list
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc        410 Apr 24 16:35 runtime_log
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc     706560 Apr 24 16:35 result.tar.gz
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc       8845 Apr 24 16:35 runtime_log.err
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc        660 Apr 24 16:35 11c4f4a4e458.diag
[2026-04-24 16:35:07] -rw-r--r--. 1 boinc boinc      21846 Apr 24 16:35 stderr.txt
[2026-04-24 16:35:07] HITS file was successfully produced:
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc 273316057 Apr 24 16:33 shared/HITS.pool.root.1
[2026-04-24 16:35:07]  *** Contents of shared directory: ***
[2026-04-24 16:35:07] total 2451348
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc 2235427021 Apr 24 16:00 ATLAS.root_0
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc      15665 Apr 24 16:00 start_atlas.sh
[2026-04-24 16:35:07] -rw-r--r--. 2 boinc boinc     697427 Apr 24 16:00 input.tar.gz
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc  273316057 Apr 24 16:33 HITS.pool.root.1
[2026-04-24 16:35:07] -rw-------. 1 boinc boinc     706560 Apr 24 16:35 result.tar.gz
16:35:08 (4055865): run_atlas exited; CPU time 21426.181400
16:35:08 (4055865): called boinc_finish(0)

</stderr_txt>
]]>

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