Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:37:29 (14713): wrapper (7.7.26015): starting
17:37:29 (14713): wrapper: running run_atlas (--nthreads 12)
[2026-04-22 17:37:29] Arguments: --nthreads 12
[2026-04-22 17:37:29] Threads: 12
[2026-04-22 17:37:29] Checking for CVMFS
[2026-04-22 17:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-22 17:37:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-22 17:37:30] Running cvmfs_config stat atlas.cern.ch
[2026-04-22 17:37:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-22 17:37:30] 2.11.2.0 2925 499911 94080 158741 2 1 20055107 20275201 1 130560 1 207730886 99.951 28129107 17118 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-22 17:37:30] CVMFS is ok
[2026-04-22 17:37:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-22 17:37:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-22 17:37:30] Further information can be found at the LHC@home message board.
[2026-04-22 17:37:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-22 17:37:30] Checking for apptainer binary...
[2026-04-22 17:37:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-22 17:37:30] Running /usr/bin/apptainer --version
[2026-04-22 17:37:30] apptainer version 1.3.2-1.el7
[2026-04-22 17:37:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-22 17:37:31] c-205-9.aglt2.org
[2026-04-22 17:37:31] apptainer works
[2026-04-22 17:37:31] Set ATHENA_PROC_NUMBER=12
[2026-04-22 17:37:31] Set ATHENA_CORE_NUMBER=12
[2026-04-22 17:37:31] Starting ATLAS job with PandaID=7098142489
[2026-04-22 17:37:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-22 19:13:08]  *** The last 200 lines of the pilot log: ***
[2026-04-22 19:13:08]  ddmendpoint_alt=None
[2026-04-22 19:13:08]  direct_access_lan=False
[2026-04-22 19:13:08]  direct_access_wan=False
[2026-04-22 19:13:08]  domain=
[2026-04-22 19:13:08]  filesize=359357
[2026-04-22 19:13:08]  filetype=log
[2026-04-22 19:13:08]  guid=bd3ab499-79ec-449d-a765-b4f482261883
[2026-04-22 19:13:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-22 19:13:08]  is_altstaged=None
[2026-04-22 19:13:08]  is_tar=False
[2026-04-22 19:13:08]  lfn=log.49499882._000517.job.log.tgz.1
[2026-04-22 19:13:08]  mtime=0
[2026-04-22 19:13:08]  protocol_id=None
[2026-04-22 19:13:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-22 19:13:08]  replicas=None
[2026-04-22 19:13:08]  scope=mc23_13p6TeV
[2026-04-22 19:13:08]  status=None
[2026-04-22 19:13:08]  status_code=0
[2026-04-22 19:13:08]  storage_token=
[2026-04-22 19:13:08]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7098142489/log.49499882._000517.job.log.tgz.1
[2026-04-22 19:13:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/2e/log.49499882._000517.job.log.tgz.1
[2026-04-22 19:13:08]  workdir=None
[2026-04-22 19:13:08] ]
[2026-04-22 19:13:08] 2026-04-22 23:12:06,427 | INFO     | transferring file log.49499882._000517.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7098142489/log.49499882._000517.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-22 19:13:08] 2026-04-22 23:12:06,427 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7098142489/log.49499882._000517.job.log.tgz.1 /tmp/boinchome/slots/0/log.49499882._000517.job
[2026-04-22 19:13:08] 2026-04-22 23:12:06,449 | INFO     | adding to output.list: log.49499882._000517.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b0/2e/log.49499882._000517.job.log.tg
[2026-04-22 19:13:08] 2026-04-22 23:12:06,450 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-22 19:13:08] 2026-04-22 23:12:06,450 | INFO     | summary of transferred files:
[2026-04-22 19:13:08] 2026-04-22 23:12:06,450 | INFO     |  -- lfn=log.49499882._000517.job.log.tgz.1, status_code=0, status=transferred
[2026-04-22 19:13:08] 2026-04-22 23:12:06,451 | INFO     | stage-out finished correctly
[2026-04-22 19:13:08] 2026-04-22 23:12:07,268 | INFO     | monitor loop #432: job 0:7098142489 is in state 'finished'
[2026-04-22 19:13:08] 2026-04-22 23:12:07,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-22 19:13:08] 2026-04-22 23:12:07,316 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-22 19:13:08] 2026-04-22 23:12:08,371 | INFO     | job 7098142489 has state=finished
[2026-04-22 19:13:08] 2026-04-22 23:12:08,371 | INFO     | preparing for final server update for job 7098142489 in state='finished'
[2026-04-22 19:13:08] 2026-04-22 23:12:08,371 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7098142489/jobReport.json
[2026-04-22 19:13:08] 2026-04-22 23:12:08,374 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-04-22 19:13:08] 2026-04-22 23:12:08,375 | INFO     | this job has now completed (state=finished)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,375 | INFO     | log transfer has been attempted: DONE
[2026-04-22 19:13:08] 2026-04-22 23:12:08,375 | INFO     | job 7098142489 has finished - writing final server update
[2026-04-22 19:13:08] 2026-04-22 23:12:08,376 | INFO     | total number of processed events: 400 (read)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,378 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7098142489/memory_monitor_summary.json (trf name=prmon)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,379 | INFO     | extracted standard info from prmon json
[2026-04-22 19:13:08] 2026-04-22 23:12:08,379 | INFO     | extracted standard memory fields from prmon json
[2026-04-22 19:13:08] 2026-04-22 23:12:08,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-22 19:13:08] 2026-04-22 23:12:08,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-22 19:13:08] 2026-04-22 23:12:08,381 | INFO     | fitting pss+swap vs Time
[2026-04-22 19:13:08] 2026-04-22 23:12:08,381 | INFO     | sum of square deviations: 197203697.5
[2026-04-22 19:13:08] 2026-04-22 23:12:08,381 | INFO     | sum of deviations: -4443163628.0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | mean x (centered): 0.0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | mean y: 2753420.023255814
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | intersect: 2753420.023255814
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | chi2: 0.13972736757745108
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | current memory leak: -22.53 B/s (using 86 data points, chi2=0.14)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,382 | INFO     | could have reported an average CPU frequency of 1684 MHz (7 samples)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | ..............................
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . Timing measurements:
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . get job = 0 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . initial setup = 7 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . payload setup = 14 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . stage-in = 0 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . payload execution = 5620 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . stage-out = 0 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,383 | INFO     | . log creation = 0 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,384 | INFO     | ..............................
[2026-04-22 19:13:08] 2026-04-22 23:12:08,460 | INFO     | 
[2026-04-22 19:13:08] 2026-04-22 23:12:08,460 | INFO     | job summary report
[2026-04-22 19:13:08] 2026-04-22 23:12:08,460 | INFO     | --------------------------------------------------
[2026-04-22 19:13:08] 2026-04-22 23:12:08,460 | INFO     | PanDA job id: 7098142489
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | task id: 49499882
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | errors: (none)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | pilot state: finished 
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | transexitcode: 0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | exeerrorcode: 0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,461 | INFO     | exeerrordiag: 
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | exitcode: 0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | exitmsg: OK
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | cpuconsumptiontime: 60375 s
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | nevents: 400
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | neventsw: 0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | pid: 22848
[2026-04-22 19:13:08] 2026-04-22 23:12:08,462 | INFO     | pgrp: 22848
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | corecount: 12
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | event service: False
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | sizes: {0: 2276414, 11: 2276414, 5639: 2303107, 5641: 2312161, 5643: 2312299}
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | --------------------------------------------------
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | 
[2026-04-22 19:13:08] 2026-04-22 23:12:08,463 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-04-22 19:13:08] 2026-04-22 23:12:08,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,488 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,488 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,488 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,491 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-22 19:13:08] 2026-04-22 23:12:08,491 | INFO     | job 7098142489 has completed (purged errors)
[2026-04-22 19:13:08] 2026-04-22 23:12:08,491 | INFO     | overall cleanup function is called
[2026-04-22 19:13:08] 2026-04-22 23:12:09,499 | INFO     | --- collectZombieJob: --- 10, [22848]
[2026-04-22 19:13:08] 2026-04-22 23:12:09,499 | INFO     | zombie collector waiting for pid 22848
[2026-04-22 19:13:08] 2026-04-22 23:12:09,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-22 19:13:08] 2026-04-22 23:12:09,508 | INFO     | collected zombie processes
[2026-04-22 19:13:08] 2026-04-22 23:12:09,508 | INFO     | will attempt to kill all subprocesses of pid=22848
[2026-04-22 19:13:08] 2026-04-22 23:12:09,598 | INFO     | process IDs to be killed: [22848] (in reverse order)
[2026-04-22 19:13:08] 2026-04-22 23:12:09,650 | WARNING  | found no corresponding commands to process id(s)
[2026-04-22 19:13:08] 2026-04-22 23:12:09,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-22 19:13:08] 2026-04-22 23:12:09,653 | INFO     | did not find any defunct processes belonging to 22848
[2026-04-22 19:13:08] 2026-04-22 23:12:09,656 | INFO     | did not find any defunct processes belonging to 22848
[2026-04-22 19:13:08] 2026-04-22 23:12:09,656 | INFO     | Ready for new job
[2026-04-22 19:13:08] 2026-04-22 23:12:09,658 | INFO     | **************************************
[2026-04-22 19:13:08] 2026-04-22 23:12:09,658 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-22 19:13:08] 2026-04-22 23:12:09,658 | INFO     | **************************************
[2026-04-22 19:13:08] 2026-04-22 23:12:09,658 | INFO     | 
[2026-04-22 19:13:08] 2026-04-22 23:12:09,659 | INFO     | architecture information:
[2026-04-22 19:13:08] 2026-04-22 23:12:09,659 | INFO     | executing command: cat /etc/os-release
[2026-04-22 19:13:08] 2026-04-22 23:12:09,674 | INFO     | cat /etc/os-release:
[2026-04-22 19:13:08] NAME="CentOS Linux"
[2026-04-22 19:13:08] VERSION="7 (Core)"
[2026-04-22 19:13:08] ID="centos"
[2026-04-22 19:13:08] ID_LIKE="rhel fedora"
[2026-04-22 19:13:08] VERSION_ID="7"
[2026-04-22 19:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-22 19:13:08] ANSI_COLOR="0;31"
[2026-04-22 19:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-22 19:13:08] HOME_URL="https://www.centos.org/"
[2026-04-22 19:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-22 19:13:08] 
[2026-04-22 19:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-22 19:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-22 19:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-22 19:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-22 19:13:08] 
[2026-04-22 19:13:08] 2026-04-22 23:12:09,674 | INFO     | **************************************
[2026-04-22 19:13:08] 2026-04-22 23:12:10,177 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-04-22 19:13:08] 2026-04-22 23:12:10,194 | INFO     | sufficient remaining disk space (29153558528 B)
[2026-04-22 19:13:08] 2026-04-22 23:12:10,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-22 19:13:08] 2026-04-22 23:12:10,194 | INFO     | current server update state: UPDATING_FINAL
[2026-04-22 19:13:08] 2026-04-22 23:12:10,194 | INFO     | update_server=False
[2026-04-22 19:13:08] 2026-04-22 23:12:10,194 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-22 19:13:08] 2026-04-22 23:12:10,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-22 19:13:08] 2026-04-22 23:12:10,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:13:08] 2026-04-22 23:12:10,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-22 19:13:08] 2026-04-22 23:12:10,776 | INFO     | aborting loop
[2026-04-22 19:13:08] 2026-04-22 23:12:10,906 | INFO     | all data control threads have been joined
[2026-04-22 19:13:08] 2026-04-22 23:12:11,200 | INFO     | [job] retrieve thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,201 | INFO     | [job] queue monitor thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,215 | INFO     | [data] copytool_in thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,462 | INFO     | all job control threads have been joined
[2026-04-22 19:13:08] 2026-04-22 23:12:11,611 | INFO     | all payload control threads have been joined
[2026-04-22 19:13:08] 2026-04-22 23:12:11,667 | INFO     | [payload] execute_payloads thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,782 | INFO     | [job] job monitor thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,874 | INFO     | [job] validate thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:11,912 | INFO     | [data] control thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,102 | INFO     | [job] create_data_payload thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,104 | INFO     | [payload] validate_pre thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,159 | INFO     | [payload] validate_post thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,201 | INFO     | [data] copytool_out thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,277 | INFO     | [payload] failed_post thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,467 | INFO     | [job] control thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:12,616 | INFO     | [payload] control thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:13,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-22 19:13:08] 2026-04-22 23:12:17,410 | INFO     | [data] queue_monitor thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:21,195 | INFO     | job.realtimelogging is not enabled
[2026-04-22 19:13:08] 2026-04-22 23:12:22,200 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-22 19:13:08] 2026-04-22 23:12:40,266 | INFO     | PID=18405 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-22 19:13:08] 2026-04-22 23:12:40,266 | INFO     | found 0 job(s) in 20 queues
[2026-04-22 19:13:08] 2026-04-22 23:12:40,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-22 19:13:08] 2026-04-22 23:12:40,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-22 19:13:08] 2026-04-22 23:13:02,796 | INFO     | [monitor] cgroup control has ended
[2026-04-22 19:13:08] 2026-04-22 23:13:02,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140211805951808)>', '<ExcThread(monitor, started 140211119961856)>']
[2026-04-22 19:13:08] 2026-04-22 23:13:03,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-22 19:13:08] 2026-04-22 23:13:03,368 | INFO     | [monitor] control thread has ended
[2026-04-22 19:13:08] 2026-04-22 23:13:07,854 | INFO     | all workflow threads have been joined
[2026-04-22 19:13:08] 2026-04-22 23:13:07,854 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-22 19:13:08] 2026-04-22 23:13:07,864 | INFO     | traces error code: 0
[2026-04-22 19:13:08] 2026-04-22 23:13:07,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-22 19:13:08] 2026-04-22 23:13:07,957 [wrapper] ==== pilot stdout END ====
[2026-04-22 19:13:08] 2026-04-22 23:13:07,960 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-22 19:13:08] 2026-04-22 23:13:07,964 [wrapper] pilotpid: 18405
[2026-04-22 19:13:08] 2026-04-22 23:13:07,968 [wrapper] Pilot exit status: 0
[2026-04-22 19:13:08] 2026-04-22 23:13:07,986 [wrapper] pandaids: 7098142489
[2026-04-22 19:13:08] 2026-04-22 23:13:08,030 [wrapper] cleanup supervisor_pilot 18679 18406
[2026-04-22 19:13:08] 2026-04-22 23:13:08,034 [wrapper] Test setup, not cleaning
[2026-04-22 19:13:08] 2026-04-22 23:13:08,038 [wrapper] apfmon messages muted
[2026-04-22 19:13:08] 2026-04-22 23:13:08,042 [wrapper] ==== wrapper stdout END ====
[2026-04-22 19:13:08] 2026-04-22 23:13:08,046 [wrapper] ==== wrapper stderr END ====
[2026-04-22 19:13:08]  *** Error codes and diagnostics ***
[2026-04-22 19:13:08]     "exeErrorCode": 0,
[2026-04-22 19:13:08]     "pilotErrorCode": 0,
[2026-04-22 19:13:08]  *** Listing of results directory ***
[2026-04-22 19:13:08] total 499480
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas    644190 Apr 18 05:00 pilot3.tar.gz
[2026-04-22 19:13:08] -rwx------ 1 boincer umatlas     36322 Apr 18 05:31 runpilot2-wrapper.sh
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas      5094 Apr 18 05:42 queuedata.json
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas       100 Apr 22 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-22 19:13:08] -rwxr-xr-x 1 boincer umatlas      7986 Apr 22 17:37 run_atlas
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas       105 Apr 22 17:37 job.xml
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas 299673019 Apr 22 17:37 EVNT.49475312._000002.pool.root.1
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas     15665 Apr 22 17:37 start_atlas.sh
[2026-04-22 19:13:08] drwxrwx--x 2 boincer umatlas      4096 Apr 22 17:37 shared
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas    656939 Apr 22 17:37 input.tar.gz
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas         0 Apr 22 17:37 boinc_lockfile
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas      2616 Apr 22 17:37 pandaJob.out
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas        57 Apr 22 17:37 setup.sh.local
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas    997023 Apr 22 17:37 agis_schedconf.cvmfs.json
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas   1509089 Apr 22 17:37 agis_ddmendpoints.agis.ALL.json
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas       433 Apr 22 17:37 workernode_map.json
[2026-04-22 19:13:08] drwx------ 5 boincer umatlas      4096 Apr 22 17:37 pilot3
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas       487 Apr 22 19:11 boinc_task_state.xml
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas 205939123 Apr 22 19:11 HITS.49499882._000517.pool.root.1
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas      5868 Apr 22 19:11 init_data.xml
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas      1060 Apr 22 19:12 memory_monitor_summary.json
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas        95 Apr 22 19:12 pilot_heartbeat.json
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas    359357 Apr 22 19:12 log.49499882._000517.job.log.tgz.1
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas      6415 Apr 22 19:12 heartbeat_new.json
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas      6306 Apr 22 19:12 heartbeat.json
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas        27 Apr 22 19:12 wrapper_checkpoint.txt
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas      8192 Apr 22 19:12 boinc_mmap_file
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas      4813 Apr 22 19:13 pilotlog.txt
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas    539533 Apr 22 19:13 log.49499882._000517.job.log.1
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas       357 Apr 22 19:13 output.list
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas       410 Apr 22 19:13 runtime_log
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas    911360 Apr 22 19:13 result.tar.gz
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas      8960 Apr 22 19:13 runtime_log.err
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas       658 Apr 22 19:13 4f8c24a9226d.diag
[2026-04-22 19:13:08] -rw-r--r-- 1 boincer umatlas     20780 Apr 22 19:13 stderr.txt
[2026-04-22 19:13:08] HITS file was successfully produced:
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas 205939123 Apr 22 19:11 shared/HITS.pool.root.1
[2026-04-22 19:13:08]  *** Contents of shared directory: ***
[2026-04-22 19:13:08] total 495328
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas 299673019 Apr 22 17:37 ATLAS.root_0
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas     15665 Apr 22 17:37 start_atlas.sh
[2026-04-22 19:13:08] -rw-r--r-- 2 boincer umatlas    656939 Apr 22 17:37 input.tar.gz
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas 205939123 Apr 22 19:11 HITS.pool.root.1
[2026-04-22 19:13:08] -rw------- 1 boincer umatlas    911360 Apr 22 19:13 result.tar.gz
19:13:09 (14713): run_atlas exited; CPU time 60348.473358
19:13:09 (14713): called boinc_finish(0)

</stderr_txt>
]]>

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