Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
19:18:40 (1382506): wrapper (7.7.26015): starting
19:18:40 (1382506): wrapper: running run_atlas (--nthreads 4)
[2026-04-21 19:18:40] Arguments: --nthreads 4
[2026-04-21 19:18:40] Threads: 4
[2026-04-21 19:18:40] Checking for CVMFS
[2026-04-21 19:18:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 19:18:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 19:18:40] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 19:18:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 19:18:40] 2.13.3.0 1364434 13 45796 158708 2 17 3549623 4096001 1001 130560 0 67825 99.979 3004 1853 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2026-04-21 19:18:40] CVMFS is ok
[2026-04-21 19:18:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 19:18:40] Small home clusters do not require a local http proxy but it is suggested if
[2026-04-21 19:18:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-04-21 19:18:40] Further information can be found at the LHC@home message board.
[2026-04-21 19:18:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 19:18:40] Checking for apptainer binary...
[2026-04-21 19:18:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 19:18:40] Running /usr/bin/apptainer --version
[2026-04-21 19:18:40] apptainer version 1.4.5
[2026-04-21 19:18:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 19:18:41] ASRock-B760M
[2026-04-21 19:18:41] apptainer works
[2026-04-21 19:18:41] Set ATHENA_PROC_NUMBER=4
[2026-04-21 19:18:41] Set ATHENA_CORE_NUMBER=4
[2026-04-21 19:18:41] Starting ATLAS job with PandaID=7089749386
[2026-04-21 19:18:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:06:10]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:06:10] 2026-04-22 01:05:36,721 | INFO     | job 7089749386 has state=finished
[2026-04-21 21:06:10] 2026-04-22 01:05:36,721 | INFO     | preparing for final server update for job 7089749386 in state='finished'
[2026-04-21 21:06:10] 2026-04-22 01:05:36,721 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/7/PanDA_Pilot-7089749386/jobReport.json
[2026-04-21 21:06:10] 2026-04-22 01:05:36,722 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/7/workernode_map.json
[2026-04-21 21:06:10] 2026-04-22 01:05:36,723 | INFO     | this job has now completed (state=finished)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,723 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,723 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:06:10] 2026-04-22 01:05:36,723 | INFO     | job 7089749386 has finished - writing final server update
[2026-04-21 21:06:10] 2026-04-22 01:05:36,723 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,726 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/7/PanDA_Pilot-7089749386/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,726 | INFO     | extracted standard info from prmon json
[2026-04-21 21:06:10] 2026-04-22 01:05:36,726 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:06:10] 2026-04-22 01:05:36,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:06:10] 2026-04-22 01:05:36,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:06:10] 2026-04-22 01:05:36,727 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | sum of square deviations: 358927660.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | sum of deviations: 403015105.0000004
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | mean x (centered): 0.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | mean y: 2355227.8
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | intersect: 2355227.8
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | chi2: 1.1301540528042473
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | sum of square deviations: 310052325.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,728 | INFO     | sum of deviations: 772395236.9999986
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | mean x (centered): 0.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | mean y: 2356382.68
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | intersect: 2356382.68
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | chi2: 1.1318422549818752
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | current chi2=1.1318422549818752 (change=-0.14937805810092475 %)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | right removable region: 99
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | sum of square deviations: 310052325.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | sum of deviations: -8767639830.499998
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | mean x (centered): 0.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | mean y: 2382839.89
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | intersect: 2382839.89
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | chi2: 0.022796449798734835
[2026-04-21 21:06:10] 2026-04-22 01:05:36,729 | INFO     | current chi2=0.022796449798734835 (change=97.98289005448682 %)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | sum of square deviations: 265828240.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | sum of deviations: -8068251803.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | mean x (centered): 0.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | mean y: 2380417.5789473685
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | intersect: 2380417.5789473685
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | chi2: 0.021420259024464105
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | current chi2=0.021420259024464105 (change=6.036864452231972 %)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | left removable region: 10
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | sum of square deviations: 218571540.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | sum of deviations: -7226253308.999998
[2026-04-21 21:06:10] 2026-04-22 01:05:36,730 | INFO     | mean x (centered): 0.0
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | mean y: 2383685.157303371
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | intersect: 2383685.157303371
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | chi2: 0.019763323342092378
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | current memory leak: -33.06 B/s (using 89 data points, chi2=0.02)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | could have reported an average CPU frequency of 3282 MHz (7 samples)
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | ..............................
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . Timing measurements:
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . get job = 0 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . initial setup = 4 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . payload setup = 4 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . stage-in = 0 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . payload execution = 6383 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . stage-out = 0 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | . log creation = 0 s
[2026-04-21 21:06:10] 2026-04-22 01:05:36,731 | INFO     | ..............................
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | 
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | job summary report
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | --------------------------------------------------
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | PanDA job id: 7089749386
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | task id: 49263200
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | errors: (none)
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | pilot state: finished 
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | transexitcode: 0
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | exeerrorcode: 0
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | exeerrordiag: 
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | exitcode: 0
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | exitmsg: OK
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | cpuconsumptiontime: 25000 s
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | nevents: 400
[2026-04-21 21:06:10] 2026-04-22 01:05:37,034 | INFO     | neventsw: 0
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | pid: 1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | pgrp: 1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | corecount: 4
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | event service: False
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | sizes: {0: 2276476, 11: 2276476, 6390: 2303611, 6391: 2312637, 6394: 2312693, 6395: 2312887}
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | --------------------------------------------------
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | 
[2026-04-21 21:06:10] 2026-04-22 01:05:37,035 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/7
[2026-04-21 21:06:10] 2026-04-22 01:05:37,051 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,053 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:06:10] 2026-04-22 01:05:37,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,053 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:06:10] 2026-04-22 01:05:37,053 | INFO     | job 7089749386 has completed (purged errors)
[2026-04-21 21:06:10] 2026-04-22 01:05:37,053 | INFO     | overall cleanup function is called
[2026-04-21 21:06:10] 2026-04-22 01:05:38,059 | INFO     | --- collectZombieJob: --- 10, [1405961]
[2026-04-21 21:06:10] 2026-04-22 01:05:38,059 | INFO     | zombie collector waiting for pid 1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:38,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:06:10] 2026-04-22 01:05:38,059 | INFO     | collected zombie processes
[2026-04-21 21:06:10] 2026-04-22 01:05:38,059 | INFO     | will attempt to kill all subprocesses of pid=1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:38,144 | INFO     | process IDs to be killed: [1405961] (in reverse order)
[2026-04-21 21:06:10] 2026-04-22 01:05:38,176 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:06:10] 2026-04-22 01:05:38,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:06:10] 2026-04-22 01:05:38,180 | INFO     | did not find any defunct processes belonging to 1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:38,183 | INFO     | did not find any defunct processes belonging to 1405961
[2026-04-21 21:06:10] 2026-04-22 01:05:38,183 | INFO     | Ready for new job
[2026-04-21 21:06:10] 2026-04-22 01:05:38,184 | INFO     | **************************************
[2026-04-21 21:06:10] 2026-04-22 01:05:38,184 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:06:10] 2026-04-22 01:05:38,184 | INFO     | **************************************
[2026-04-21 21:06:10] 2026-04-22 01:05:38,184 | INFO     | 
[2026-04-21 21:06:10] 2026-04-22 01:05:38,185 | INFO     | architecture information:
[2026-04-21 21:06:10] 2026-04-22 01:05:38,185 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:06:10] 2026-04-22 01:05:38,198 | INFO     | cat /etc/os-release:
[2026-04-21 21:06:10] NAME="CentOS Linux"
[2026-04-21 21:06:10] VERSION="7 (Core)"
[2026-04-21 21:06:10] ID="centos"
[2026-04-21 21:06:10] ID_LIKE="rhel fedora"
[2026-04-21 21:06:10] VERSION_ID="7"
[2026-04-21 21:06:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:06:10] ANSI_COLOR="0;31"
[2026-04-21 21:06:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:06:10] HOME_URL="https://www.centos.org/"
[2026-04-21 21:06:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:06:10] 
[2026-04-21 21:06:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:06:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:06:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:06:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:06:10] 
[2026-04-21 21:06:10] 2026-04-22 01:05:38,199 | INFO     | **************************************
[2026-04-21 21:06:10] 2026-04-22 01:05:38,701 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/7
[2026-04-21 21:06:10] 2026-04-22 01:05:38,711 | INFO     | sufficient remaining disk space (366758330368 B)
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | INFO     | update_server=False
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:06:10] 2026-04-22 01:05:38,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:06:10] 2026-04-22 01:05:38,873 | INFO     | all payload control threads have been joined
[2026-04-21 21:06:10] 2026-04-22 01:05:39,006 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-21 21:06:10] 2026-04-22 01:05:39,006 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-21 21:06:10] 2026-04-22 01:05:39,006 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:06:10] 2026-04-22 01:05:39,006 | INFO     | will abort loop
[2026-04-21 21:06:10] 2026-04-22 01:05:39,717 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:39,717 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:39,719 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:39,726 | INFO     | all job control threads have been joined
[2026-04-21 21:06:10] 2026-04-22 01:05:39,811 | INFO     | all data control threads have been joined
[2026-04-21 21:06:10] 2026-04-22 01:05:39,879 | INFO     | [payload] control thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:39,890 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,011 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,102 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,644 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,718 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,731 | INFO     | [job] control thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:40,816 | INFO     | [data] control thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:41,033 | INFO     | [job] validate thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:41,107 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:41,132 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:41,480 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:06:10] 2026-04-22 01:05:45,484 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:49,750 | INFO     | job.realtimelogging is not enabled
[2026-04-21 21:06:10] 2026-04-22 01:05:50,750 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:06:10] 2026-04-22 01:05:59,776 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:06:10] 2026-04-22 01:06:00,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135515561326400)>', '<ExcThread(monitor, started 135514933946112)>']
[2026-04-21 21:06:10] 2026-04-22 01:06:05,431 | INFO     | all workflow threads have been joined
[2026-04-21 21:06:10] 2026-04-22 01:06:05,432 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:06:10] 2026-04-22 01:06:05,432 | INFO     | traces error code: 0
[2026-04-21 21:06:10] 2026-04-22 01:06:05,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:06:10] 2026-04-22 01:06:09,830 | INFO     | PID=1388479 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:06:10] 2026-04-22 01:06:09,830 | INFO     | .. there are 3 such processes running
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | CRITICAL | thread 'MainThread' is not alive
[2026-04-21 21:06:10] 2026-04-22 01:06:09,831 | INFO     | [monitor] control thread has ended
[2026-04-21 21:06:10] 2026-04-22 01:06:09,920 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:06:10] 2026-04-22 01:06:09,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:06:10] 2026-04-22 01:06:09,924 [wrapper] pilotpid: 1388479
[2026-04-21 21:06:10] 2026-04-22 01:06:09,925 [wrapper] Pilot exit status: 0
[2026-04-21 21:06:10] 2026-04-22 01:06:09,931 [wrapper] pandaids: 7089749386
[2026-04-21 21:06:10] 2026-04-22 01:06:09,952 [wrapper] cleanup supervisor_pilot 1419867 1388480
[2026-04-21 21:06:10] 2026-04-22 01:06:09,954 [wrapper] Test setup, not cleaning
[2026-04-21 21:06:10] 2026-04-22 01:06:09,956 [wrapper] apfmon messages muted
[2026-04-21 21:06:10] 2026-04-22 01:06:09,958 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:06:10] 2026-04-22 01:06:09,960 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:06:10]  *** Error codes and diagnostics ***
[2026-04-21 21:06:10]     "exeErrorCode": 0,
[2026-04-21 21:06:10]     "pilotErrorCode": 0,
[2026-04-21 21:06:10]  *** Listing of results directory ***
[2026-04-21 21:06:10] total 413196
[2026-04-21 21:06:10] -rwx------ 1 whitlerd whitlerd     36322 Apr 13 15:38 runpilot2-wrapper.sh
[2026-04-21 21:06:10] -rw-r--r-- 1 whitlerd whitlerd      5094 Apr 13 15:39 queuedata.json
[2026-04-21 21:06:10] -rw-r--r-- 1 whitlerd whitlerd    644190 Apr 13 15:41 pilot3.tar.gz
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd       100 Apr 21 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:06:10] -rwxr-xr-x 1 whitlerd whitlerd      7986 Apr 21 19:18 run_atlas
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd       105 Apr 21 19:18 job.xml
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd 222774101 Apr 21 19:18 EVNT.49263198._001946.pool.root.1
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd    656926 Apr 21 19:18 input.tar.gz
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 21 19:18 start_atlas.sh
[2026-04-21 21:06:10] drwxrwx--x 2 whitlerd whitlerd      4096 Apr 21 19:18 shared
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 21 19:18 boinc_setup_complete
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd      9075 Apr 21 19:18 init_data.xml
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd         0 Apr 21 19:18 boinc_lockfile
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd      2576 Apr 21 19:18 pandaJob.out
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd    997058 Apr 21 19:18 agis_schedconf.cvmfs.json
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd   1509089 Apr 21 19:18 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd       420 Apr 21 19:18 workernode_map.json
[2026-04-21 21:06:10] drwx------ 5 whitlerd whitlerd      4096 Apr 21 19:18 pilot3
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd 194473779 Apr 21 21:05 HITS.49263200._067104.pool.root.1
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd       487 Apr 21 21:05 boinc_task_state.xml
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd      1019 Apr 21 21:05 memory_monitor_summary.json
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd        95 Apr 21 21:05 pilot_heartbeat.json
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd    264950 Apr 21 21:05 log.49263200._067104.job.log.tgz.1
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd      6323 Apr 21 21:05 heartbeat_new.json
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd      6214 Apr 21 21:05 heartbeat.json
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd      8192 Apr 21 21:05 boinc_mmap_file
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd        27 Apr 21 21:05 wrapper_checkpoint.txt
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd       892 Apr 21 21:06 pilotlog.txt
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd    642331 Apr 21 21:06 log.49263200._067104.job.log.1
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd       357 Apr 21 21:06 output.list
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd       410 Apr 21 21:06 runtime_log
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd    921600 Apr 21 21:06 result.tar.gz
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd      8641 Apr 21 21:06 runtime_log.err
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd       652 Apr 21 21:06 4644c632c2cb.diag
[2026-04-21 21:06:10] -rw-rw-r-- 1 whitlerd whitlerd     21202 Apr 21 21:06 stderr.txt
[2026-04-21 21:06:10] HITS file was successfully produced:
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd 194473779 Apr 21 21:05 shared/HITS.pool.root.1
[2026-04-21 21:06:10]  *** Contents of shared directory: ***
[2026-04-21 21:06:10] total 409040
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd 222774101 Apr 21 19:18 ATLAS.root_0
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd    656926 Apr 21 19:18 input.tar.gz
[2026-04-21 21:06:10] -rw-r--r-- 2 whitlerd whitlerd     15665 Apr 21 19:18 start_atlas.sh
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd 194473779 Apr 21 21:05 HITS.pool.root.1
[2026-04-21 21:06:10] -rw------- 1 whitlerd whitlerd    921600 Apr 21 21:06 result.tar.gz
21:06:11 (1382506): run_atlas exited; CPU time 25054.237569
21:06:11 (1382506): called boinc_finish(0)

</stderr_txt>
]]>

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