Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:56:44 (3878880): wrapper (7.7.26015): starting
17:56:44 (3878880): wrapper: running run_atlas (--nthreads 8)
[2026-04-21 17:56:44] Arguments: --nthreads 8
[2026-04-21 17:56:44] Threads: 8
[2026-04-21 17:56:44] Checking for CVMFS
[2026-04-21 17:56:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 17:56:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 17:56:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 17:56:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 17:56:45] 2.13.3.0 12204 170329 252176 158705 2 60 28632965 40960001 26591 16776704 0 1491327696 99.737 1077258602 31731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-21 17:56:45] CVMFS is ok
[2026-04-21 17:56:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 17:56:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 17:56:45] Further information can be found at the LHC@home message board.
[2026-04-21 17:56:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 17:56:45] Checking for apptainer binary...
[2026-04-21 17:56:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 17:56:45] Running /usr/bin/apptainer --version
[2026-04-21 17:56:45] apptainer version 1.4.5-2.el9
[2026-04-21 17:56:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 17:56:46] c-212-15.aglt2.org
[2026-04-21 17:56:46] apptainer works
[2026-04-21 17:56:46] Set ATHENA_PROC_NUMBER=8
[2026-04-21 17:56:46] Set ATHENA_CORE_NUMBER=8
[2026-04-21 17:56:46] Starting ATLAS job with PandaID=7089661300
[2026-04-21 17:56:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 21:41:08]  *** The last 200 lines of the pilot log: ***
[2026-04-21 21:41:08] 2026-04-22 01:39:54,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 21:41:08] 2026-04-22 01:39:56,912 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-21 21:41:08] 2026-04-22 01:39:57,226 | INFO     | monitor loop #830: job 0:7089661300 is in state 'finished'
[2026-04-21 21:41:08] 2026-04-22 01:39:57,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,209 | INFO     | job 7089661300 has state=finished
[2026-04-21 21:41:08] 2026-04-22 01:39:59,210 | INFO     | preparing for final server update for job 7089661300 in state='finished'
[2026-04-21 21:41:08] 2026-04-22 01:39:59,210 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7089661300/jobReport.json
[2026-04-21 21:41:08] 2026-04-22 01:39:59,232 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-04-21 21:41:08] 2026-04-22 01:39:59,233 | INFO     | this job has now completed (state=finished)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,233 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,233 | INFO     | log transfer has been attempted: DONE
[2026-04-21 21:41:08] 2026-04-22 01:39:59,233 | INFO     | job 7089661300 has finished - writing final server update
[2026-04-21 21:41:08] 2026-04-22 01:39:59,234 | INFO     | total number of processed events: 400 (read)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,249 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7089661300/memory_monitor_summary.json (trf name=prmon)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,250 | INFO     | extracted standard info from prmon json
[2026-04-21 21:41:08] 2026-04-22 01:39:59,250 | INFO     | extracted standard memory fields from prmon json
[2026-04-21 21:41:08] 2026-04-22 01:39:59,251 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-21 21:41:08] 2026-04-22 01:39:59,251 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-21 21:41:08] 2026-04-22 01:39:59,255 | INFO     | fitting pss+swap vs Time
[2026-04-21 21:41:08] 2026-04-22 01:39:59,255 | INFO     | sum of square deviations: 3212453526.4266
[2026-04-21 21:41:08] 2026-04-22 01:39:59,256 | INFO     | sum of deviations: 42734793747.275215
[2026-04-21 21:41:08] 2026-04-22 01:39:59,256 | INFO     | mean x (centered): 0.0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,257 | INFO     | mean y: 2466669.4311926607
[2026-04-21 21:41:08] 2026-04-22 01:39:59,257 | INFO     | intersect: 2466669.4311926607
[2026-04-21 21:41:08] 2026-04-22 01:39:59,257 | INFO     | chi2: 2.8128934520638507
[2026-04-21 21:41:08] 2026-04-22 01:39:59,257 | INFO     | sum of square deviations: 2996441393.924881
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | sum of deviations: 55129994903.99057
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | mean x (centered): 0.0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | mean y: 2475240.5023474176
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | intersect: 2475240.5023474176
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | chi2: 2.1306389753786723
[2026-04-21 21:41:08] 2026-04-22 01:39:59,259 | INFO     | current chi2=2.1306389753786723 (change=24.254543882015895 %)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,260 | INFO     | right removable region: 212
[2026-04-21 21:41:08] 2026-04-22 01:39:59,260 | INFO     | sum of square deviations: 2996438953.924881
[2026-04-21 21:41:08] 2026-04-22 01:39:59,261 | INFO     | sum of deviations: -1298528467.4600945
[2026-04-21 21:41:08] 2026-04-22 01:39:59,262 | INFO     | mean x (centered): 0.0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,262 | INFO     | mean y: 2497523.615023474
[2026-04-21 21:41:08] 2026-04-22 01:39:59,262 | INFO     | intersect: 2497523.615023474
[2026-04-21 21:41:08] 2026-04-22 01:39:59,262 | INFO     | chi2: 0.8240853452327984
[2026-04-21 21:41:08] 2026-04-22 01:39:59,262 | INFO     | current chi2=0.8240853452327984 (change=70.70328616150896 %)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,263 | INFO     | sum of square deviations: 2790331543.9230742
[2026-04-21 21:41:08] 2026-04-22 01:39:59,264 | INFO     | sum of deviations: -8959377832.00001
[2026-04-21 21:41:08] 2026-04-22 01:39:59,264 | INFO     | mean x (centered): 0.0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,264 | INFO     | mean y: 2503143.25
[2026-04-21 21:41:08] 2026-04-22 01:39:59,264 | INFO     | intersect: 2503143.25
[2026-04-21 21:41:08] 2026-04-22 01:39:59,265 | INFO     | chi2: 0.7587989180002142
[2026-04-21 21:41:08] 2026-04-22 01:39:59,265 | INFO     | current chi2=0.7587989180002142 (change=7.9222895553544035 %)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,265 | INFO     | left removable region: 10
[2026-04-21 21:41:08] 2026-04-22 01:39:59,265 | INFO     | sum of square deviations: 2555755586.4207997
[2026-04-21 21:41:08] 2026-04-22 01:39:59,266 | INFO     | sum of deviations: 3979573961.1534657
[2026-04-21 21:41:08] 2026-04-22 01:39:59,266 | INFO     | mean x (centered): 0.0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,266 | INFO     | mean y: 2512989.836633663
[2026-04-21 21:41:08] 2026-04-22 01:39:59,266 | INFO     | intersect: 2512989.836633663
[2026-04-21 21:41:08] 2026-04-22 01:39:59,267 | INFO     | chi2: 0.0553472556033655
[2026-04-21 21:41:08] 2026-04-22 01:39:59,267 | INFO     | current memory leak: 1.56 B/s (using 202 data points, chi2=0.06)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,267 | INFO     | could have reported an average CPU frequency of 3175 MHz (11 samples)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | ..............................
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . Timing measurements:
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . get job = 0 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . initial setup = 18 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . payload setup = 45 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . stage-in = 0 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . payload execution = 13268 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . stage-out = 3 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | . log creation = 0 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,268 | INFO     | ..............................
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | 
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | job summary report
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | --------------------------------------------------
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | PanDA job id: 7089661300
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | task id: 49645815
[2026-04-21 21:41:08] 2026-04-22 01:39:59,346 | INFO     | errors: (none)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | pilot state: finished 
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | transexitcode: 0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | exeerrorcode: 0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | exeerrordiag: 
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | exitcode: 0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | exitmsg: OK
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | cpuconsumptiontime: 43764 s
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | nevents: 400
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | neventsw: 0
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | pid: 3906177
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | pgrp: 3906177
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | corecount: 8
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | event service: False
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | sizes: {0: 2274654, 1: 2274738, 2: 2276567, 12: 2276567, 13319: 2306725, 13324: 2315723, 13328: 2315907, 13330: 2316101}
[2026-04-21 21:41:08] 2026-04-22 01:39:59,347 | INFO     | --------------------------------------------------
[2026-04-21 21:41:08] 2026-04-22 01:39:59,348 | INFO     | 
[2026-04-21 21:41:08] 2026-04-22 01:39:59,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-21 21:41:08] 2026-04-22 01:39:59,396 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,396 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,396 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,396 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 21:41:08] 2026-04-22 01:39:59,403 | INFO     | job 7089661300 has completed (purged errors)
[2026-04-21 21:41:08] 2026-04-22 01:39:59,404 | INFO     | overall cleanup function is called
[2026-04-21 21:41:08] 2026-04-22 01:40:00,416 | INFO     | --- collectZombieJob: --- 10, [3906177]
[2026-04-21 21:41:08] 2026-04-22 01:40:00,417 | INFO     | zombie collector waiting for pid 3906177
[2026-04-21 21:41:08] 2026-04-22 01:40:00,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 21:41:08] 2026-04-22 01:40:00,417 | INFO     | collected zombie processes
[2026-04-21 21:41:08] 2026-04-22 01:40:00,417 | INFO     | will attempt to kill all subprocesses of pid=3906177
[2026-04-21 21:41:08] 2026-04-22 01:40:03,727 | INFO     | process IDs to be killed: [3906177] (in reverse order)
[2026-04-21 21:41:08] 2026-04-22 01:40:03,999 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 21:41:08] 2026-04-22 01:40:04,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 21:41:08] 2026-04-22 01:40:04,079 | INFO     | did not find any defunct processes belonging to 3906177
[2026-04-21 21:41:08] 2026-04-22 01:40:04,100 | INFO     | did not find any defunct processes belonging to 3906177
[2026-04-21 21:41:08] 2026-04-22 01:40:04,101 | INFO     | Ready for new job
[2026-04-21 21:41:08] 2026-04-22 01:40:04,112 | INFO     | **************************************
[2026-04-21 21:41:08] 2026-04-22 01:40:04,113 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 21:41:08] 2026-04-22 01:40:04,113 | INFO     | **************************************
[2026-04-21 21:41:08] 2026-04-22 01:40:04,113 | INFO     | 
[2026-04-21 21:41:08] 2026-04-22 01:40:04,119 | INFO     | architecture information:
[2026-04-21 21:41:08] 2026-04-22 01:40:04,120 | INFO     | executing command: cat /etc/os-release
[2026-04-21 21:41:08] 2026-04-22 01:40:04,290 | INFO     | cat /etc/os-release:
[2026-04-21 21:41:08] NAME="CentOS Linux"
[2026-04-21 21:41:08] VERSION="7 (Core)"
[2026-04-21 21:41:08] ID="centos"
[2026-04-21 21:41:08] ID_LIKE="rhel fedora"
[2026-04-21 21:41:08] VERSION_ID="7"
[2026-04-21 21:41:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 21:41:08] ANSI_COLOR="0;31"
[2026-04-21 21:41:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 21:41:08] HOME_URL="https://www.centos.org/"
[2026-04-21 21:41:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 21:41:08] 
[2026-04-21 21:41:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 21:41:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 21:41:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 21:41:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 21:41:08] 
[2026-04-21 21:41:08] 2026-04-22 01:40:04,290 | INFO     | **************************************
[2026-04-21 21:41:08] 2026-04-22 01:40:04,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-21 21:41:08] 2026-04-22 01:40:04,865 | INFO     | sufficient remaining disk space (124966141952 B)
[2026-04-21 21:41:08] 2026-04-22 01:40:04,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 21:41:08] 2026-04-22 01:40:04,865 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 21:41:08] 2026-04-22 01:40:04,865 | INFO     | update_server=False
[2026-04-21 21:41:08] 2026-04-22 01:40:04,865 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 21:41:08] 2026-04-22 01:40:04,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 21:41:08] 2026-04-22 01:40:04,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:41:08] 2026-04-22 01:40:05,439 | INFO     | all data control threads have been joined
[2026-04-21 21:41:08] 2026-04-22 01:40:05,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 21:41:08] 2026-04-22 01:40:05,778 | INFO     | aborting loop
[2026-04-21 21:41:08] 2026-04-22 01:40:05,843 | INFO     | all payload control threads have been joined
[2026-04-21 21:41:08] 2026-04-22 01:40:05,871 | INFO     | [job] retrieve thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:05,871 | INFO     | [job] queue monitor thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:05,873 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,162 | INFO     | [payload] failed_post thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,324 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,383 | INFO     | all job control threads have been joined
[2026-04-21 21:41:08] 2026-04-22 01:40:06,466 | INFO     | [data] control thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,740 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,783 | INFO     | [job] job monitor thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,849 | INFO     | [payload] control thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,872 | INFO     | [data] copytool_out thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:06,884 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:07,187 | INFO     | [data] copytool_in thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:07,237 | INFO     | [job] validate thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:07,280 | INFO     | [payload] validate_post thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:07,389 | INFO     | [job] control thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:07,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 21:41:08] 2026-04-22 01:40:11,804 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 21:41:08] 2026-04-22 01:40:34,063 | INFO     | PID=3886783 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 21:41:08] 2026-04-22 01:40:34,064 | INFO     | .. there are 21 such processes running
[2026-04-21 21:41:08] 2026-04-22 01:40:34,064 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 21:41:08] 2026-04-22 01:40:34,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 21:41:08] 2026-04-22 01:40:34,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 21:41:08] 2026-04-22 01:41:00,637 | INFO     | [monitor] cgroup control has ended
[2026-04-21 21:41:08] 2026-04-22 01:41:01,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859641628480)>', '<ExcThread(monitor, started 139859259795200)>']
[2026-04-21 21:41:08] 2026-04-22 01:41:02,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 21:41:08] 2026-04-22 01:41:02,230 | INFO     | [monitor] control thread has ended
[2026-04-21 21:41:08] 2026-04-22 01:41:06,714 | INFO     | all workflow threads have been joined
[2026-04-21 21:41:08] 2026-04-22 01:41:06,715 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 21:41:08] 2026-04-22 01:41:06,715 | INFO     | traces error code: 0
[2026-04-21 21:41:08] 2026-04-22 01:41:06,715 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 21:41:08] 2026-04-22 01:41:07,430 [wrapper] ==== pilot stdout END ====
[2026-04-21 21:41:08] 2026-04-22 01:41:07,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 21:41:08] 2026-04-22 01:41:07,450 [wrapper] pilotpid: 3886783
[2026-04-21 21:41:08] 2026-04-22 01:41:07,453 [wrapper] Pilot exit status: 0
[2026-04-21 21:41:08] 2026-04-22 01:41:07,476 [wrapper] pandaids: 7089661300
[2026-04-21 21:41:08] 2026-04-22 01:41:07,742 [wrapper] cleanup supervisor_pilot 1480220 3886784
[2026-04-21 21:41:08] 2026-04-22 01:41:07,748 [wrapper] Test setup, not cleaning
[2026-04-21 21:41:08] 2026-04-22 01:41:07,755 [wrapper] apfmon messages muted
[2026-04-21 21:41:08] 2026-04-22 01:41:07,760 [wrapper] ==== wrapper stdout END ====
[2026-04-21 21:41:08] 2026-04-22 01:41:07,764 [wrapper] ==== wrapper stderr END ====
[2026-04-21 21:41:08]  *** Error codes and diagnostics ***
[2026-04-21 21:41:08]     "exeErrorCode": 0,
[2026-04-21 21:41:08]     "pilotErrorCode": 0,
[2026-04-21 21:41:08]  *** Listing of results directory ***
[2026-04-21 21:41:08] total 417368
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas    644190 Apr 13 14:01 pilot3.tar.gz
[2026-04-21 21:41:08] -rwx------. 1 boincer umatlas     36322 Apr 13 14:04 runpilot2-wrapper.sh
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas      5094 Apr 13 14:12 queuedata.json
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas       100 Apr 21 17:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 21:41:08] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 21 17:56 run_atlas
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas       105 Apr 21 17:56 job.xml
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas 225658566 Apr 21 17:56 EVNT.48629115._000685.pool.root.1
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 21 17:56 start_atlas.sh
[2026-04-21 21:41:08] drwxrwx--x. 2 boincer umatlas      4096 Apr 21 17:56 shared
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas    656951 Apr 21 17:56 input.tar.gz
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas         0 Apr 21 17:56 boinc_lockfile
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas      2630 Apr 21 17:56 pandaJob.out
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas        57 Apr 21 17:56 setup.sh.local
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas    997058 Apr 21 17:57 agis_schedconf.cvmfs.json
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas       430 Apr 21 17:57 workernode_map.json
[2026-04-21 21:41:08] drwx------. 5 boincer umatlas      4096 Apr 21 17:57 pilot3
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas 194625541 Apr 21 21:39 HITS.49645815._017167.pool.root.1
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas       488 Apr 21 21:39 boinc_task_state.xml
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas      6873 Apr 21 21:39 init_data.xml
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas      1048 Apr 21 21:39 memory_monitor_summary.json
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas        95 Apr 21 21:39 pilot_heartbeat.json
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas   1509089 Apr 21 21:39 agis_ddmendpoints.agis.ALL.json
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas    401123 Apr 21 21:39 log.49645815._017167.job.log.tgz.1
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas      6379 Apr 21 21:39 heartbeat_new.json
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas      6270 Apr 21 21:39 heartbeat.json
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas        28 Apr 21 21:41 wrapper_checkpoint.txt
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas      8192 Apr 21 21:41 boinc_mmap_file
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas      4820 Apr 21 21:41 pilotlog.txt
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas   1119337 Apr 21 21:41 log.49645815._017167.job.log.1
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas       357 Apr 21 21:41 output.list
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas       410 Apr 21 21:41 runtime_log
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas   1536000 Apr 21 21:41 result.tar.gz
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas      8964 Apr 21 21:41 runtime_log.err
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas       661 Apr 21 21:41 30220de208c2.diag
[2026-04-21 21:41:08] -rw-r--r--. 1 boincer umatlas     21286 Apr 21 21:41 stderr.txt
[2026-04-21 21:41:08] HITS file was successfully produced:
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas 194625541 Apr 21 21:39 shared/HITS.pool.root.1
[2026-04-21 21:41:08]  *** Contents of shared directory: ***
[2026-04-21 21:41:08] total 412608
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas 225658566 Apr 21 17:56 ATLAS.root_0
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas     15665 Apr 21 17:56 start_atlas.sh
[2026-04-21 21:41:08] -rw-r--r--. 2 boincer umatlas    656951 Apr 21 17:56 input.tar.gz
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas 194625541 Apr 21 21:39 HITS.pool.root.1
[2026-04-21 21:41:08] -rw-------. 1 boincer umatlas   1536000 Apr 21 21:41 result.tar.gz
21:41:09 (3878880): run_atlas exited; CPU time 44342.188650
21:41:09 (3878880): called boinc_finish(0)

</stderr_txt>
]]>

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