Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:17 (3608894): wrapper (7.7.26015): starting
17:46:17 (3608894): wrapper: running run_atlas (--nthreads 10)
[2026-04-21 17:46:17] Arguments: --nthreads 10
[2026-04-21 17:46:17] Threads: 10
[2026-04-21 17:46:17] Checking for CVMFS
[2026-04-21 17:46:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-21 17:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-21 17:46:18] Running cvmfs_config stat atlas.cern.ch
[2026-04-21 17:46:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-21 17:46:24] 2.13.3.0 3085114 109579 965380 158704 2 623 20193444 32935936 30058 16776704 1 865918738 99.773 555741609 15270 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 0
[2026-04-21 17:46:24] CVMFS is ok
[2026-04-21 17:46:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-21 17:46:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-21 17:46:24] Further information can be found at the LHC@home message board.
[2026-04-21 17:46:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-21 17:46:24] Checking for apptainer binary...
[2026-04-21 17:46:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-21 17:46:24] Running /usr/bin/apptainer --version
[2026-04-21 17:46:24] apptainer version 1.4.5-2.el9
[2026-04-21 17:46:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-21 17:46:25] lc-12-33.aglt2.org
[2026-04-21 17:46:25] apptainer works
[2026-04-21 17:46:25] Set ATHENA_PROC_NUMBER=10
[2026-04-21 17:46:25] Set ATHENA_CORE_NUMBER=10
[2026-04-21 17:46:25] Starting ATLAS job with PandaID=7105079708
[2026-04-21 17:46:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-21 20:39:41]  *** The last 200 lines of the pilot log: ***
[2026-04-21 20:39:41] 2026-04-22 00:38:58,613 | INFO     | mean y: 2559703.3128834357
[2026-04-21 20:39:41] 2026-04-22 00:38:58,613 | INFO     | intersect: 2559703.3128834357
[2026-04-21 20:39:41] 2026-04-22 00:38:58,613 | INFO     | chi2: 6.611275634277458
[2026-04-21 20:39:41] 2026-04-22 00:38:58,613 | INFO     | sum of square deviations: 1223001726.9873388
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | sum of deviations: 95982560563.06323
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | mean y: 2554182.2151898732
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | intersect: 2554182.2151898732
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | chi2: 6.629797934833599
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | current chi2=6.629797934833599 (change=-0.28016228003122856 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,614 | INFO     | right removable region: 157
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | sum of square deviations: 1222996236.9873388
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | sum of deviations: 39408087011.113945
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | mean y: 2637169.9873417723
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | intersect: 2637169.9873417723
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | chi2: 1.317554631229548
[2026-04-21 20:39:41] 2026-04-22 00:38:58,615 | INFO     | current chi2=1.317554631229548 (change=80.07109816449905 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | sum of square deviations: 1110516964.4705844
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | sum of deviations: 10844914723.823523
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | mean y: 2675545.908496732
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | intersect: 2675545.908496732
[2026-04-21 20:39:41] 2026-04-22 00:38:58,616 | INFO     | chi2: 0.02968945543276334
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | current chi2=0.02968945543276334 (change=97.74662433503369 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | sum of square deviations: 1005163680.5675654
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | sum of deviations: 7713383657.905403
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | mean y: 2680042.5743243243
[2026-04-21 20:39:41] 2026-04-22 00:38:58,617 | INFO     | intersect: 2680042.5743243243
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | chi2: 0.018068670619386253
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | current chi2=0.018068670619386253 (change=39.14111809727958 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | sum of square deviations: 906684975.5524467
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | sum of deviations: 6805481335.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | mean y: 2681500.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,618 | INFO     | intersect: 2681500.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | chi2: 0.004331376673051894
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | current chi2=0.004331376673051894 (change=76.02824931456402 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | sum of square deviations: 814857558.0362309
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | sum of deviations: 5794637132.956521
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | mean y: 2683173.1304347827
[2026-04-21 20:39:41] 2026-04-22 00:38:58,619 | INFO     | intersect: 2683173.1304347827
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | chi2: 0.004096026107137791
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | current chi2=0.004096026107137791 (change=5.433620386293373 %)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | left removable region: 25
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | sum of square deviations: 713122764.5151502
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | sum of deviations: 4507299957.515152
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | mean x (centered): 0.0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | mean y: 2680856.0606060605
[2026-04-21 20:39:41] 2026-04-22 00:38:58,620 | INFO     | intersect: 2680856.0606060605
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | chi2: 0.003610977767392822
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | current memory leak: 6.32 B/s (using 132 data points, chi2=0.00)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | could have reported an average CPU frequency of 2606 MHz (9 samples)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | ..............................
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | . Timing measurements:
[2026-04-21 20:39:41] 2026-04-22 00:38:58,621 | INFO     | . get job = 0 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . initial setup = 58 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . payload setup = 190 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . stage-in = 0 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . payload execution = 9978 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . stage-out = 1 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | . log creation = 0 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,622 | INFO     | ..............................
[2026-04-21 20:39:41] 2026-04-22 00:38:58,765 | INFO     | 
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | job summary report
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | --------------------------------------------------
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | PanDA job id: 7105079708
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | task id: 49820244
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | errors: (none)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | pilot state: finished 
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | transexitcode: 0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | exeerrorcode: 0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | exeerrordiag: 
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | exitcode: 0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | exitmsg: OK
[2026-04-21 20:39:41] 2026-04-22 00:38:58,766 | INFO     | cpuconsumptiontime: 75204 s
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | nevents: 400
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | neventsw: 0
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | pid: 3646931
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | pgrp: 3646931
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | corecount: 10
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | event service: False
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | sizes: {0: 2274522, 1: 2274833, 2: 2276407, 3: 2276435, 10171: 2305014, 10173: 2314012, 10176: 2314196, 10177: 2314454}
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | --------------------------------------------------
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | 
[2026-04-21 20:39:41] 2026-04-22 00:38:58,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-21 20:39:41] 2026-04-22 00:38:58,807 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,807 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,807 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,808 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-21 20:39:41] 2026-04-22 00:38:58,809 | INFO     | job 7105079708 has completed (purged errors)
[2026-04-21 20:39:41] 2026-04-22 00:38:58,809 | INFO     | overall cleanup function is called
[2026-04-21 20:39:41] 2026-04-22 00:38:59,817 | INFO     | --- collectZombieJob: --- 10, [3646931]
[2026-04-21 20:39:41] 2026-04-22 00:38:59,818 | INFO     | zombie collector waiting for pid 3646931
[2026-04-21 20:39:41] 2026-04-22 00:38:59,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-21 20:39:41] 2026-04-22 00:38:59,818 | INFO     | collected zombie processes
[2026-04-21 20:39:41] 2026-04-22 00:38:59,818 | INFO     | will attempt to kill all subprocesses of pid=3646931
[2026-04-21 20:39:41] 2026-04-22 00:39:00,355 | INFO     | process IDs to be killed: [3646931] (in reverse order)
[2026-04-21 20:39:41] 2026-04-22 00:39:00,548 | WARNING  | found no corresponding commands to process id(s)
[2026-04-21 20:39:41] 2026-04-22 00:39:00,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-21 20:39:41] 2026-04-22 00:39:00,566 | INFO     | did not find any defunct processes belonging to 3646931
[2026-04-21 20:39:41] 2026-04-22 00:39:00,583 | INFO     | did not find any defunct processes belonging to 3646931
[2026-04-21 20:39:41] 2026-04-22 00:39:00,583 | INFO     | Ready for new job
[2026-04-21 20:39:41] 2026-04-22 00:39:00,585 | INFO     | **************************************
[2026-04-21 20:39:41] 2026-04-22 00:39:00,585 | INFO     | ***  PanDA Pilot version 3.12.4.1  ***
[2026-04-21 20:39:41] 2026-04-22 00:39:00,585 | INFO     | **************************************
[2026-04-21 20:39:41] 2026-04-22 00:39:00,585 | INFO     | 
[2026-04-21 20:39:41] 2026-04-22 00:39:00,588 | INFO     | architecture information:
[2026-04-21 20:39:41] 2026-04-22 00:39:00,589 | INFO     | executing command: cat /etc/os-release
[2026-04-21 20:39:41] 2026-04-22 00:39:00,614 | INFO     | cat /etc/os-release:
[2026-04-21 20:39:41] NAME="CentOS Linux"
[2026-04-21 20:39:41] VERSION="7 (Core)"
[2026-04-21 20:39:41] ID="centos"
[2026-04-21 20:39:41] ID_LIKE="rhel fedora"
[2026-04-21 20:39:41] VERSION_ID="7"
[2026-04-21 20:39:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-21 20:39:41] ANSI_COLOR="0;31"
[2026-04-21 20:39:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-21 20:39:41] HOME_URL="https://www.centos.org/"
[2026-04-21 20:39:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-21 20:39:41] 
[2026-04-21 20:39:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-21 20:39:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-21 20:39:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-21 20:39:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-21 20:39:41] 
[2026-04-21 20:39:41] 2026-04-22 00:39:00,614 | INFO     | **************************************
[2026-04-21 20:39:41] 2026-04-22 00:39:01,117 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-21 20:39:41] 2026-04-22 00:39:01,145 | INFO     | sufficient remaining disk space (72360132608 B)
[2026-04-21 20:39:41] 2026-04-22 00:39:01,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-21 20:39:41] 2026-04-22 00:39:01,146 | INFO     | current server update state: UPDATING_FINAL
[2026-04-21 20:39:41] 2026-04-22 00:39:01,146 | INFO     | update_server=False
[2026-04-21 20:39:41] 2026-04-22 00:39:01,146 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-21 20:39:41] 2026-04-22 00:39:01,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-21 20:39:41] 2026-04-22 00:39:01,236 | INFO     | all job control threads have been joined
[2026-04-21 20:39:41] 2026-04-22 00:39:01,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:39:41] 2026-04-22 00:39:01,747 | INFO     | aborting loop
[2026-04-21 20:39:41] 2026-04-22 00:39:02,039 | INFO     | all data control threads have been joined
[2026-04-21 20:39:41] 2026-04-22 00:39:02,151 | INFO     | [job] retrieve thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:02,191 | INFO     | [data] copytool_in thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:02,240 | INFO     | [job] control thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:02,356 | INFO     | [job] validate thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:02,619 | INFO     | all payload control threads have been joined
[2026-04-21 20:39:41] 2026-04-22 00:39:02,723 | INFO     | [payload] execute_payloads thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:02,751 | INFO     | [job] job monitor thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,044 | INFO     | [data] control thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,151 | INFO     | [data] copytool_out thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,284 | INFO     | [job] create_data_payload thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,382 | INFO     | [payload] validate_post thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,459 | INFO     | [payload] validate_pre thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-21 20:39:41] 2026-04-22 00:39:03,624 | INFO     | [payload] control thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:03,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-21 20:39:41] 2026-04-22 00:39:03,731 | INFO     | [payload] failed_post thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:04,698 | INFO     | [job] queue monitor thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:07,525 | INFO     | [data] queue_monitor thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:11,266 | INFO     | job.realtimelogging is not enabled
[2026-04-21 20:39:41] 2026-04-22 00:39:12,271 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-21 20:39:41] 2026-04-22 00:39:32,522 | INFO     | PID=3620566 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-21 20:39:41] 2026-04-22 00:39:32,522 | INFO     | .. there are 43 such processes running
[2026-04-21 20:39:41] 2026-04-22 00:39:32,524 | INFO     | found 0 job(s) in 20 queues
[2026-04-21 20:39:41] 2026-04-22 00:39:32,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-21 20:39:41] 2026-04-22 00:39:32,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-21 20:39:41] 2026-04-22 00:39:34,629 | INFO     | [monitor] cgroup control has ended
[2026-04-21 20:39:41] 2026-04-22 00:39:35,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930022934336)>', '<ExcThread(monitor, started 139929656993536)>']
[2026-04-21 20:39:41] 2026-04-22 00:39:36,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-21 20:39:41] 2026-04-22 00:39:36,545 | INFO     | [monitor] control thread has ended
[2026-04-21 20:39:41] 2026-04-22 00:39:40,574 | INFO     | all workflow threads have been joined
[2026-04-21 20:39:41] 2026-04-22 00:39:40,575 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-21 20:39:41] 2026-04-22 00:39:40,575 | INFO     | traces error code: 0
[2026-04-21 20:39:41] 2026-04-22 00:39:40,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-21 20:39:41] 2026-04-22 00:39:40,851 [wrapper] ==== pilot stdout END ====
[2026-04-21 20:39:41] 2026-04-22 00:39:40,858 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-21 20:39:41] 2026-04-22 00:39:40,864 [wrapper] pilotpid: 3620566
[2026-04-21 20:39:41] 2026-04-22 00:39:40,868 [wrapper] Pilot exit status: 0
[2026-04-21 20:39:41] 2026-04-22 00:39:40,893 [wrapper] pandaids: 7105079708
[2026-04-21 20:39:41] 2026-04-22 00:39:41,041 [wrapper] cleanup supervisor_pilot 1795127 3620567
[2026-04-21 20:39:41] 2026-04-22 00:39:41,046 [wrapper] Test setup, not cleaning
[2026-04-21 20:39:41] 2026-04-22 00:39:41,053 [wrapper] apfmon messages muted
[2026-04-21 20:39:41] 2026-04-22 00:39:41,060 [wrapper] ==== wrapper stdout END ====
[2026-04-21 20:39:41] 2026-04-22 00:39:41,067 [wrapper] ==== wrapper stderr END ====
[2026-04-21 20:39:41]  *** Error codes and diagnostics ***
[2026-04-21 20:39:41]     "exeErrorCode": 0,
[2026-04-21 20:39:41]     "pilotErrorCode": 0,
[2026-04-21 20:39:41]  *** Listing of results directory ***
[2026-04-21 20:39:41] total 2470056
[2026-04-21 20:39:41] -rwx------. 1 boincer umatlas      36322 Apr 21 03:43 runpilot2-wrapper.sh
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas     644190 Apr 21 05:10 pilot3.tar.gz
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas       5094 Apr 21 05:22 queuedata.json
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas        100 Apr 21 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-21 20:39:41] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 21 17:46 run_atlas
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas        105 Apr 21 17:46 job.xml
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas 2245030346 Apr 21 17:46 EVNT.49820242._000025.pool.root.1
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 17:46 start_atlas.sh
[2026-04-21 20:39:41] drwxrwx--x. 2 boincer umatlas       4096 Apr 21 17:46 shared
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas     656926 Apr 21 17:46 input.tar.gz
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas          0 Apr 21 17:46 boinc_lockfile
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas       2551 Apr 21 17:46 pandaJob.out
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas         57 Apr 21 17:46 setup.sh.local
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas     997058 Apr 21 17:48 agis_schedconf.cvmfs.json
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas    1509089 Apr 21 17:48 agis_ddmendpoints.agis.ALL.json
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas        442 Apr 21 17:49 workernode_map.json
[2026-04-21 20:39:41] drwx------. 5 boincer umatlas       4096 Apr 21 17:49 pilot3
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas  277352584 Apr 21 20:38 HITS.49820244._013150.pool.root.1
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas        490 Apr 21 20:38 boinc_task_state.xml
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas       6780 Apr 21 20:38 init_data.xml
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas       1043 Apr 21 20:38 memory_monitor_summary.json
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas     560994 Apr 21 20:38 log.49820244._013150.job.log.tgz.1
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas       6409 Apr 21 20:38 heartbeat_new.json
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas       6300 Apr 21 20:38 heartbeat.json
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas       8192 Apr 21 20:39 boinc_mmap_file
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas         27 Apr 21 20:39 wrapper_checkpoint.txt
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas         95 Apr 21 20:39 pilot_heartbeat.json
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas       4891 Apr 21 20:39 pilotlog.txt
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas     881966 Apr 21 20:39 log.49820244._013150.job.log.1
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas        357 Apr 21 20:39 output.list
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas        410 Apr 21 20:39 runtime_log
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas    1464320 Apr 21 20:39 result.tar.gz
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas       8966 Apr 21 20:39 runtime_log.err
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas        656 Apr 21 20:39 2a92c79d110a.diag
[2026-04-21 20:39:41] -rw-r--r--. 1 boincer umatlas      20838 Apr 21 20:39 stderr.txt
[2026-04-21 20:39:41] HITS file was successfully produced:
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas 277352584 Apr 21 20:38 shared/HITS.pool.root.1
[2026-04-21 20:39:41]  *** Contents of shared directory: ***
[2026-04-21 20:39:41] total 2465372
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas 2245030346 Apr 21 17:46 ATLAS.root_0
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas      15665 Apr 21 17:46 start_atlas.sh
[2026-04-21 20:39:41] -rw-r--r--. 2 boincer umatlas     656926 Apr 21 17:46 input.tar.gz
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas  277352584 Apr 21 20:38 HITS.pool.root.1
[2026-04-21 20:39:41] -rw-------. 1 boincer umatlas    1464320 Apr 21 20:39 result.tar.gz
20:39:42 (3608894): run_atlas exited; CPU time 75798.075097
20:39:42 (3608894): called boinc_finish(0)

</stderr_txt>
]]>

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